BDGP Sequence Production Resources |
Search the DGRC for GH12452
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 124 |
Well: | 52 |
Vector: | pOT2 |
Associated Gene/Transcript | CG34404-RD |
Protein status: | GH12452.pep: gold |
Preliminary Size: | 2553 |
Sequenced Size: | 2504 |
Gene | Date | Evidence |
---|---|---|
CG6156 | 2002-12-10 | Blastp of sequenced clone |
CG34404 | 2008-04-29 | Release 5.5 accounting |
CG34404 | 2008-08-15 | Release 5.9 accounting |
CG34404 | 2008-12-18 | 5.12 accounting |
2504 bp (2504 high quality bases) assembled on 2002-12-10
GenBank Submission: BT003615
> GH12452.complete CTTCCGCGCAGCTTGAGCTGCCTGTGCTGCAGCGATACGCCATCGGTGCC CAACGACAAGAGACGCAGTTGGGAGTATACGCTGATGGCTCATCCTCTGG CCAGACGGCCCATAAACGTTGAGCAACTGTCGGTACAACAGCTAGAAAAC CGGGTGCGGGATCTAACGCAGCGTCTGCAGCAGGCGGAAAGACAGCTCAC TGAGAGCAACACAGAGCGGGAAATATGCCACAAGCGCTTGGAGGTTGTCA GCCAGGCCCACGAGTGTCGCATCACAGAGATGCACTGTGTCATCGCCGAG TTAAGCAAGAAATTGCGCAGTAAGCAGGACCACGTTATCATGGAGGAGCA GGAGCCCGACGGCAGCGAACTCAGCTTTCAGGAGGGTTCAGTGTACAATT CCGAGCTTAACCTCACCAATCCTGATGCCGAATGTCAAACAGAACCACTG GAAGACTTCGAGGGCGCCTGCAGTACCACCAGCGTGGGTAACGTTGCCCA CAAACCGCCGGAACTGAGCCATAAGGGACAAGTGGAGGCACTGCAGGAGG AAGTTCTGCACTTGAGAGCTCGAATCGCCCTCCTCCAGTCCGAGATTTCC ACCAAGGATGCTGCTGTGGTCGAGGAACAGACCAAAGTCGCCTTCGACTG CGAATCGGAAGTCAACGAGTGCGGACAGCGACTGAATGATTTGAATGTTT GCACTTCCTTGACAAGTCCGCAAAAACGCATTCCAGCGGTACCGAAAATG GCTGAACGGGTTAAGTTGCGGTGCGCCAGCAAACATGAATCCGGAGAAGA TCCATCCCAAGATACTTCATTGAGCAACGAGCAAATTAATCTGGTCGAAC ATTTGGTGTCGGAGCTAAAGGAGCAAAATCTATATATGGAGAACTTTATG GAGCCCCTACATTTGAGCAAAGACTTGGAGCGACTGCAACGACGTGTTGA ACAATTGGAGATGCGAAACACCATGCTGGCACTGACGCTAGACGAATGCA AGGAGCACACTGAGCATCTGTATCTGCTATGCGGAAAGTACGAGTCCAAT GCGGTTGCTCTTCAGTTGGCGCTTAATTGCAGTGATCGCGCCATCGAGGC CTACGACGTAATGTTGGCTCTGCTCGAAAGCAAGTTGGCACTGCTGGGGG AGAAATCAGTGGCAGCGGAAGAGAGTCGACGATCGGTGGAGGCGGTGGCC AGGCACCTGCTAGCCCGTTTGGATAGCGAGAAAAACGTTTGTGAGAACAG CCTGGGACCGTGGCAACACAACATCAACCTGGGCCCAGAGGATGCCCCAA AAACTGGCCGCCCGTGGTGTGCCGACGACGACAACCGCCTGCGTTACCAC GTCTCCAAGCTGAAGGGACGTCGTTCCAATGTCCAGCATACCATTGTCAG TTTGGAATCACCCTTCAGCGACATATACGAAAGAAAGCGCCTGGCTTTGG AAAAGGAGCACGAACTTCGGAGCGCGGACAAGAAGTCACCCATTGACTTG GAGACAGCAGTGATTATGCAAGAAATACTCGAGCTGCGGGATTCGAATTT GCAGCTGAAGACAAAAATGGAAGAGGCCGAGCAGGAACGGCAGAACGCCA ACGAACGAGTGGGCATACTCCACGAAGCCCTAAAGCAGCTACAGGCAAAC AACCGGGTCTCGTATTCGGAGGCGGAGCATGCGGCTCTCACAGAGCAGCA GTTGGTGGAGGCCTTAACTCGAGAAACGGAGCTCAAGGGTCGCATACAGA CGCTATTGGCAAATGTAACAGCTTCGCAGAAGGCCTTCGACGAAAAATAC GAGCAACTGCATCAGAACGTGCGTGAACTGCAGAAATCCAACCACAATCT GGGCCAAATGTTAGATCACACCAAGCGCAAGTACCAGCTGCGGGTGAGGA AGCTAGAGCAGAAGATTGTTGACCTGCGGCTGGACTACGAGCAAGGCCAT AACCATGTTCCTGAGACTACTCTGTAGGAAACGCATGACGACCTTCCAGG AGGACTGAGCAACTGGGCGTGGAGCGGGCGCGCTTGTCACATATCCCGCA AAAGATCTTTCCCTCTCGATCATATCGCTTATTTTACCTTTAATGCAATG ACCACCCGCCCAGCAGTCGCCGTGGATCCGCCATGACCAAGACAGTATCA CGAATGTGCCATGCGACTTAATTGCAGTCGGCTGGGGCTTGGGCGGTGTC CCTGCCTCGCAGATAAGGCTGCAGTAACTACATACTCAAATACATACATA TTCAGAGGTGCCATGAGCAAGGCTCCACCAACCTATCCATAGATCCGTGG GATTGGAGCATCCGTCTATGGGCCACAAGCAATTACATATACACACATAC GAATAGACAAACTAAGGAGTTATTCAAGACGCATACACGGGATCCTATAT TTATACAATGTATTCGCATTTTGCTTGTTATATGATTCAATATGTATTTA AAACTGTACAAAATATAAAACGTCTACTAAAACTCGAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34404-RD | 2684 | CG34404-RD | 43..2534 | 1..2492 | 12445 | 99.9 | Plus |
CG34404.c | 3143 | CG34404.c | 185..2559 | 118..2492 | 11860 | 99.9 | Plus |
CG34404-RE | 2771 | CG34404-RE | 185..2559 | 118..2492 | 11860 | 99.9 | Plus |
CG34404.c | 3143 | CG34404.c | 1..119 | 1..119 | 595 | 100 | Plus |
CG34404-RE | 2771 | CG34404-RE | 1..119 | 1..119 | 595 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 11189270..11189980 | 1844..1134 | 3555 | 100 | Minus |
chr3R | 27901430 | chr3R | 11188570..11189211 | 2486..1845 | 3210 | 100 | Minus |
chr3R | 27901430 | chr3R | 11190595..11190925 | 697..367 | 1655 | 100 | Minus |
chr3R | 27901430 | chr3R | 11190040..11190345 | 1135..830 | 1530 | 100 | Minus |
chr3R | 27901430 | chr3R | 11190982..11191231 | 367..118 | 1250 | 100 | Minus |
chr3R | 27901430 | chr3R | 11190406..11190540 | 831..697 | 675 | 100 | Minus |
chr3R | 27901430 | chr3R | 11191297..11191415 | 119..1 | 595 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 15364635..15365345 | 1844..1134 | 3555 | 100 | Minus |
3R | 32079331 | 3R | 15363929..15364576 | 2492..1845 | 3225 | 99.8 | Minus |
3R | 32079331 | 3R | 15365960..15366290 | 697..367 | 1655 | 100 | Minus |
3R | 32079331 | 3R | 15365405..15365710 | 1135..830 | 1530 | 100 | Minus |
3R | 32079331 | 3R | 15366347..15366596 | 367..118 | 1250 | 100 | Minus |
3R | 32079331 | 3R | 15365771..15365905 | 831..697 | 675 | 100 | Minus |
3R | 32079331 | 3R | 15366662..15366780 | 119..1 | 595 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 15105466..15106176 | 1844..1134 | 3555 | 100 | Minus |
3R | 31820162 | 3R | 15104760..15105407 | 2492..1845 | 3225 | 99.8 | Minus |
3R | 31820162 | 3R | 15106791..15107121 | 697..367 | 1655 | 100 | Minus |
3R | 31820162 | 3R | 15106236..15106541 | 1135..830 | 1530 | 100 | Minus |
3R | 31820162 | 3R | 15107178..15107427 | 367..118 | 1250 | 100 | Minus |
3R | 31820162 | 3R | 15106602..15106736 | 831..697 | 675 | 100 | Minus |
3R | 31820162 | 3R | 15107493..15107611 | 119..1 | 595 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11188570..11189211 | 1845..2486 | 100 | <- | Minus |
chr3R | 11189270..11189980 | 1134..1844 | 100 | <- | Minus |
chr3R | 11190042..11190343 | 832..1133 | 100 | <- | Minus |
chr3R | 11190406..11190539 | 698..831 | 100 | <- | Minus |
chr3R | 11190595..11190924 | 368..697 | 100 | <- | Minus |
chr3R | 11190982..11191231 | 118..367 | 100 | <- | Minus |
chr3R | 11191299..11191415 | 1..117 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34404-RD | 1..1893 | 85..1977 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34404-RD | 1..1893 | 85..1977 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34404-RD | 1..1893 | 85..1977 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34404-RD | 1..1893 | 85..1977 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34404-RD | 1..1893 | 85..1977 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34404-RD | 1..2486 | 1..2486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34404-RD | 1..2486 | 1..2486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34404-RD | 1..2486 | 1..2486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34404-RD | 1..2486 | 1..2486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34404-RD | 1..2486 | 1..2486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15363935..15364576 | 1845..2486 | 100 | <- | Minus |
3R | 15364635..15365345 | 1134..1844 | 100 | <- | Minus |
3R | 15365407..15365708 | 832..1133 | 100 | <- | Minus |
3R | 15365771..15365904 | 698..831 | 100 | <- | Minus |
3R | 15365960..15366289 | 368..697 | 100 | <- | Minus |
3R | 15366347..15366596 | 118..367 | 100 | <- | Minus |
3R | 15366664..15366780 | 1..117 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15363935..15364576 | 1845..2486 | 100 | <- | Minus |
3R | 15364635..15365345 | 1134..1844 | 100 | <- | Minus |
3R | 15365407..15365708 | 832..1133 | 100 | <- | Minus |
3R | 15365771..15365904 | 698..831 | 100 | <- | Minus |
3R | 15365960..15366289 | 368..697 | 100 | <- | Minus |
3R | 15366347..15366596 | 118..367 | 100 | <- | Minus |
3R | 15366664..15366780 | 1..117 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15363935..15364576 | 1845..2486 | 100 | <- | Minus |
3R | 15364635..15365345 | 1134..1844 | 100 | <- | Minus |
3R | 15365407..15365708 | 832..1133 | 100 | <- | Minus |
3R | 15365771..15365904 | 698..831 | 100 | <- | Minus |
3R | 15365960..15366289 | 368..697 | 100 | <- | Minus |
3R | 15366347..15366596 | 118..367 | 100 | <- | Minus |
3R | 15366664..15366780 | 1..117 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11189657..11190298 | 1845..2486 | 100 | <- | Minus |
arm_3R | 11190357..11191067 | 1134..1844 | 100 | <- | Minus |
arm_3R | 11191129..11191430 | 832..1133 | 100 | <- | Minus |
arm_3R | 11191493..11191626 | 698..831 | 100 | <- | Minus |
arm_3R | 11191682..11192011 | 368..697 | 100 | <- | Minus |
arm_3R | 11192069..11192318 | 118..367 | 100 | <- | Minus |
arm_3R | 11192386..11192502 | 1..117 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15104766..15105407 | 1845..2486 | 100 | <- | Minus |
3R | 15105466..15106176 | 1134..1844 | 100 | <- | Minus |
3R | 15106238..15106539 | 832..1133 | 100 | <- | Minus |
3R | 15106602..15106735 | 698..831 | 100 | <- | Minus |
3R | 15106791..15107120 | 368..697 | 100 | <- | Minus |
3R | 15107178..15107427 | 118..367 | 100 | <- | Minus |
3R | 15107495..15107611 | 1..117 | 100 | Minus |
Translation from 1 to 1976
> GH12452.hyp LPRSLSCLCCSDTPSVPNDKRRSWEYTLMAHPLARRPINVEQLSVQQLEN RVRDLTQRLQQAERQLTESNTEREICHKRLEVVSQAHECRITEMHCVIAE LSKKLRSKQDHVIMEEQEPDGSELSFQEGSVYNSELNLTNPDAECQTEPL EDFEGACSTTSVGNVAHKPPELSHKGQVEALQEEVLHLRARIALLQSEIS TKDAAVVEEQTKVAFDCESEVNECGQRLNDLNVCTSLTSPQKRIPAVPKM AERVKLRCASKHESGEDPSQDTSLSNEQINLVEHLVSELKEQNLYMENFM EPLHLSKDLERLQRRVEQLEMRNTMLALTLDECKEHTEHLYLLCGKYESN AVALQLALNCSDRAIEAYDVMLALLESKLALLGEKSVAAEESRRSVEAVA RHLLARLDSEKNVCENSLGPWQHNINLGPEDAPKTGRPWCADDDNRLRYH VSKLKGRRSNVQHTIVSLESPFSDIYERKRLALEKEHELRSADKKSPIDL ETAVIMQEILELRDSNLQLKTKMEEAEQERQNANERVGILHEALKQLQAN NRVSYSEAEHAALTEQQLVEALTRETELKGRIQTLLANVTASQKAFDEKY EQLHQNVRELQKSNHNLGQMLDHTKRKYQLRVRKLEQKIVDLRLDYEQGH NHVPETTL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34404-PD | 630 | CG34404-PD | 1..630 | 29..658 | 3205 | 100 | Plus |
CG34404-PC | 715 | CG34404-PC | 97..715 | 40..658 | 3146 | 100 | Plus |
CG34404-PE | 565 | CG34404-PE | 1..565 | 94..658 | 2877 | 100 | Plus |
Golgin245-PA | 1489 | CG3493-PA | 333..941 | 49..629 | 164 | 19.4 | Plus |
Mhc-PL | 1936 | CG17927-PL | 1163..1798 | 19..648 | 162 | 19.2 | Plus |
Translation from 84 to 1976
> GH12452.pep MAHPLARRPINVEQLSVQQLENRVRDLTQRLQQAERQLTESNTEREICHK RLEVVSQAHECRITEMHCVIAELSKKLRSKQDHVIMEEQEPDGSELSFQE GSVYNSELNLTNPDAECQTEPLEDFEGACSTTSVGNVAHKPPELSHKGQV EALQEEVLHLRARIALLQSEISTKDAAVVEEQTKVAFDCESEVNECGQRL NDLNVCTSLTSPQKRIPAVPKMAERVKLRCASKHESGEDPSQDTSLSNEQ INLVEHLVSELKEQNLYMENFMEPLHLSKDLERLQRRVEQLEMRNTMLAL TLDECKEHTEHLYLLCGKYESNAVALQLALNCSDRAIEAYDVMLALLESK LALLGEKSVAAEESRRSVEAVARHLLARLDSEKNVCENSLGPWQHNINLG PEDAPKTGRPWCADDDNRLRYHVSKLKGRRSNVQHTIVSLESPFSDIYER KRLALEKEHELRSADKKSPIDLETAVIMQEILELRDSNLQLKTKMEEAEQ ERQNANERVGILHEALKQLQANNRVSYSEAEHAALTEQQLVEALTRETEL KGRIQTLLANVTASQKAFDEKYEQLHQNVRELQKSNHNLGQMLDHTKRKY QLRVRKLEQKIVDLRLDYEQGHNHVPETTL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16706-PA | 626 | GF16706-PA | 1..626 | 1..630 | 2807 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20596-PA | 630 | GG20596-PA | 1..630 | 1..630 | 3281 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18407-PA | 683 | GH18407-PA | 42..683 | 1..630 | 2307 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34404-PD | 630 | CG34404-PD | 1..630 | 1..630 | 3205 | 100 | Plus |
CG34404-PC | 715 | CG34404-PC | 97..715 | 12..630 | 3146 | 100 | Plus |
CG34404-PE | 565 | CG34404-PE | 1..565 | 66..630 | 2877 | 100 | Plus |
Golgin245-PA | 1489 | CG3493-PA | 333..941 | 21..601 | 164 | 19.4 | Plus |
Mhc-PL | 1936 | CG17927-PL | 1199..1798 | 24..620 | 161 | 19.3 | Plus |
Mhc-PM | 1936 | CG17927-PM | 1199..1798 | 24..620 | 161 | 19.3 | Plus |
Mhc-PK | 1936 | CG17927-PK | 1199..1798 | 24..620 | 161 | 19.3 | Plus |
Mhc-PP | 1949 | CG17927-PP | 1199..1798 | 24..620 | 161 | 19.3 | Plus |
Mhc-PV | 1962 | CG17927-PV | 1199..1798 | 24..620 | 161 | 19.3 | Plus |
Mhc-PS | 1962 | CG17927-PS | 1199..1798 | 24..620 | 161 | 19.3 | Plus |
Mhc-PB | 1962 | CG17927-PB | 1199..1798 | 24..620 | 161 | 19.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24310-PA | 636 | GI24310-PA | 1..636 | 1..630 | 2215 | 70.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23640-PA | 630 | GL23640-PA | 1..630 | 1..630 | 2662 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA30112-PB | 630 | GA30112-PB | 1..630 | 1..630 | 2663 | 81.2 | Plus |
Dpse\GA30112-PA | 720 | GA30112-PA | 102..720 | 12..630 | 2605 | 81 | Plus |
Dpse\GA30112-PC | 565 | GA30112-PC | 1..565 | 66..630 | 2355 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25776-PA | 630 | GM25776-PA | 1..630 | 1..630 | 3260 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20354-PA | 630 | GD20354-PA | 1..630 | 1..630 | 3276 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10394-PA | 690 | GJ10394-PA | 43..690 | 1..630 | 2321 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11441-PA | 623 | GK11441-PA | 1..623 | 1..630 | 2217 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26381-PA | 630 | GE26381-PA | 1..630 | 1..630 | 3268 | 98.4 | Plus |