BDGP Sequence Production Resources |
Search the DGRC for GH12489
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 124 |
Well: | 89 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11534-RA |
Protein status: | GH12489.pep: gold |
Preliminary Size: | 1663 |
Sequenced Size: | 1627 |
Gene | Date | Evidence |
---|---|---|
CG11534 | 2001-01-01 | Release 2 assignment |
CG11534 | 2001-09-19 | Blastp of sequenced clone |
CG11534 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11534 | 2008-04-29 | Release 5.5 accounting |
CG11534 | 2008-08-15 | Release 5.9 accounting |
CG11534 | 2008-12-18 | 5.12 accounting |
1627 bp (1627 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058352
> GH12489.complete CTGGTCGCTAAAAAAACACACAAAGACTTGTTTTGTTGTTCTTCCCCAAA AATGAGCTCCTGGAAGGACAGTCTCACGAGCATTCCGGGCACGGTGGCGC AGTTGATTAACGAGAGCGCCAGCAACCTGTTACACGCCTCATCCACGCTG GGATCAACAGTTGGCCTTGGAGGCTCTGGCTCCACTGGATCTGGATCCGA GGCCGGAGGCTCCGAGGAAAGTGGTCCACAAGGTGCGGAGTACAGGGCGT TGCCCATTCCCGCGTCCTTGGTGCGCGAGCAATGGCGCCTAATCTTCACC AGCGATGCCAATATCCAGGATTTGCAGGCGGCCATCGCCCATTGCAGAGA TCTCGTCCTGCTGAGCGAGGAACTCAGCGAGGAGCGTCGCTGGTTGGTGC GGCACCTGGTAGATTTGCGATACTCACTGCAGGAGCTGGAGGAGGCCCAG GAGCAGCATTCCCTATCGTCGGACATGGTAGTTATGAATGCCATACGTGC TGTGGTGGGTCATCATTTTGTGCCCCATCACCCGCATCATGGCAAACGGA ATCGTCTGCAGGCAGCCGCCAAGAGGAACTACTGTGACCACTGCACCACC ATTATTTGGAGTGTGGTGCAGAACTCGTACGTGTGCAGCGATTGCGGATT CCTGGTCCATCAGAAGTGCATCGATGGCGTGAAGAGGGTTTGTGCCCATG TCCTGGTTTCAGAGCGGCAGCATCCCATTTCGGAGATATGTCCAGAAATC GGACTCGCCTCCCAGGGATACAAGTGCGCCGAGTGCGGGACGATGCTAAA TATAAAAAATACCTGGATTGAGCCGCGTCTATGCGACTATAGTGGATTGT ACTACTGCCCTCGCTGCAACTGGAACGACAGTAACTTTATACCAGCCCGC ATTATCCACAATTGGGACTTTTCGCCACGCAGAGTGTCGCGCACGGCGCT CCAAGAGATTAGGTTGTTCCTAAATAAACCGCTCATTCGCTTGGAGGAGG ACAATCCCAAGCTGTTTGTGTTCGTAGAAAAATTGTGTGCGGTAAAGAAA CTTCGCCAAAATCTGGTGCATATGCGCCACTATCTGGCTGCCTGCAAGAT TGCCAGCGAGTTGAAGCTGGTGGATCAGCAACTGGGTGTCCGGCGACATC TGGCCCAGTCAAATGAGTTCTATTCCCTAAGTGATCTCAGCCAGGTGGAA TCTGGAGCGCTGAGCGAATTTCTGCAAGGAGTTTTCAAGGCATTCAATGA TCACATACGATCCTGCCCCATGTGCCTTGCCCAAGCGTACATTTGCGAGA TTTGTAGCAACAACGAGGTGATCTTTCCCTTCGACGATGGCTGCATCAAG TGTGATCAGTGCAATTCCATCTTCCACCGAGTTTGCCTCACGCGCAAAAA TATGATTTGCCCCAAATGCATTCGCATCCAAGAGCGGCGTCTTCAATTGG ATCGCATGAAGAGCACCGAGGACGATGATGATGATGATGATGGAGTGGCC ACCGATGATGACGTGACTGCCGCAGAATAACTGATCAAATCAGAGTTCAT TGTGCTGTGTTGGTTTTTAATATGTTATCATATGTACATAAAATGTAACT ATAAAATGTAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 12122916..12123722 | 1..805 | 99 | -> | Plus |
chr3L | 12123775..12124581 | 806..1609 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11534-RA | 1..1479 | 52..1530 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11534-RA | 1..1479 | 52..1530 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11534-RA | 1..1479 | 52..1530 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11534-RA | 1..1479 | 52..1530 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11534-RA | 1..1479 | 52..1530 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11534-RA | 1..1609 | 1..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11534-RA | 1..1609 | 1..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11534-RA | 27..1635 | 1..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11534-RA | 1..1609 | 1..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11534-RA | 27..1635 | 1..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12132172..12132976 | 1..805 | 100 | -> | Plus |
3L | 12133029..12133832 | 806..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12132172..12132976 | 1..805 | 100 | -> | Plus |
3L | 12133029..12133832 | 806..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12132172..12132976 | 1..805 | 100 | -> | Plus |
3L | 12133029..12133832 | 806..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 12125272..12126076 | 1..805 | 100 | -> | Plus |
arm_3L | 12126129..12126932 | 806..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12125272..12126076 | 1..805 | 100 | -> | Plus |
3L | 12126129..12126932 | 806..1609 | 100 | Plus |
Translation from 1 to 1529
> GH12489.hyp LVAKKTHKDLFCCSSPKMSSWKDSLTSIPGTVAQLINESASNLLHASSTL GSTVGLGGSGSTGSGSEAGGSEESGPQGAEYRALPIPASLVREQWRLIFT SDANIQDLQAAIAHCRDLVLLSEELSEERRWLVRHLVDLRYSLQELEEAQ EQHSLSSDMVVMNAIRAVVGHHFVPHHPHHGKRNRLQAAAKRNYCDHCTT IIWSVVQNSYVCSDCGFLVHQKCIDGVKRVCAHVLVSERQHPISEICPEI GLASQGYKCAECGTMLNIKNTWIEPRLCDYSGLYYCPRCNWNDSNFIPAR IIHNWDFSPRRVSRTALQEIRLFLNKPLIRLEEDNPKLFVFVEKLCAVKK LRQNLVHMRHYLAACKIASELKLVDQQLGVRRHLAQSNEFYSLSDLSQVE SGALSEFLQGVFKAFNDHIRSCPMCLAQAYICEICSNNEVIFPFDDGCIK CDQCNSIFHRVCLTRKNMICPKCIRIQERRLQLDRMKSTEDDDDDDDGVA TDDDVTAAE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11534-PA | 492 | CG11534-PA | 1..492 | 18..509 | 2621 | 100 | Plus |
CG6613-PA | 720 | CG6613-PA | 460..704 | 238..482 | 382 | 33.7 | Plus |
CG12772-PB | 827 | CG12772-PB | 596..825 | 252..479 | 305 | 29.1 | Plus |
CG12772-PA | 827 | CG12772-PA | 596..825 | 252..479 | 305 | 29.1 | Plus |
Translation from 51 to 1529
> GH12489.pep MSSWKDSLTSIPGTVAQLINESASNLLHASSTLGSTVGLGGSGSTGSGSE AGGSEESGPQGAEYRALPIPASLVREQWRLIFTSDANIQDLQAAIAHCRD LVLLSEELSEERRWLVRHLVDLRYSLQELEEAQEQHSLSSDMVVMNAIRA VVGHHFVPHHPHHGKRNRLQAAAKRNYCDHCTTIIWSVVQNSYVCSDCGF LVHQKCIDGVKRVCAHVLVSERQHPISEICPEIGLASQGYKCAECGTMLN IKNTWIEPRLCDYSGLYYCPRCNWNDSNFIPARIIHNWDFSPRRVSRTAL QEIRLFLNKPLIRLEEDNPKLFVFVEKLCAVKKLRQNLVHMRHYLAACKI ASELKLVDQQLGVRRHLAQSNEFYSLSDLSQVESGALSEFLQGVFKAFND HIRSCPMCLAQAYICEICSNNEVIFPFDDGCIKCDQCNSIFHRVCLTRKN MICPKCIRIQERRLQLDRMKSTEDDDDDDDGVATDDDVTAAE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24801-PA | 477 | GF24801-PA | 1..461 | 1..471 | 2106 | 86.2 | Plus |
Dana\GF13287-PA | 727 | GF13287-PA | 457..709 | 213..465 | 368 | 31.9 | Plus |
Dana\GF22302-PA | 829 | GF22302-PA | 599..827 | 235..462 | 275 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15560-PA | 488 | GG15560-PA | 1..488 | 1..492 | 2552 | 97 | Plus |
Dere\GG22160-PA | 720 | GG22160-PA | 460..701 | 221..462 | 376 | 34.1 | Plus |
Dere\GG18265-PA | 822 | GG18265-PA | 591..820 | 235..462 | 286 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16150-PA | 471 | GH16150-PA | 1..471 | 1..489 | 1906 | 74.3 | Plus |
Dgri\GH20549-PA | 723 | GH20549-PA | 455..704 | 213..462 | 366 | 32.3 | Plus |
Dgri\GH11907-PA | 916 | GH11907-PA | 686..912 | 235..463 | 265 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11534-PA | 492 | CG11534-PA | 1..492 | 1..492 | 2621 | 100 | Plus |
CG6613-PA | 720 | CG6613-PA | 460..704 | 221..465 | 382 | 33.7 | Plus |
CG12772-PB | 827 | CG12772-PB | 596..825 | 235..462 | 305 | 29.1 | Plus |
CG12772-PA | 827 | CG12772-PA | 596..825 | 235..462 | 305 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12422-PA | 477 | GI12422-PA | 1..468 | 1..486 | 1949 | 74.1 | Plus |
Dmoj\GI18818-PA | 710 | GI18818-PA | 455..701 | 219..468 | 365 | 33.5 | Plus |
Dmoj\GI21481-PA | 907 | GI21481-PA | 676..904 | 235..465 | 300 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25154-PA | 477 | GL25154-PA | 1..464 | 1..474 | 2085 | 82.3 | Plus |
Dper\GL11774-PA | 579 | GL11774-PA | 317..563 | 219..465 | 366 | 33.5 | Plus |
Dper\GL12951-PA | 847 | GL12951-PA | 620..845 | 235..462 | 298 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23700-PA | 477 | GA23700-PA | 1..464 | 1..474 | 2076 | 82.1 | Plus |
Dpse\GA19724-PA | 719 | GA19724-PA | 457..703 | 219..465 | 367 | 33.5 | Plus |
Dpse\GA11804-PA | 846 | GA11804-PA | 619..844 | 235..462 | 301 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25328-PA | 490 | GM25328-PA | 1..490 | 1..492 | 2596 | 98.4 | Plus |
Dsec\GM15880-PA | 720 | GM15880-PA | 460..704 | 221..465 | 379 | 33.7 | Plus |
Dsec\GM21745-PA | 821 | GM21745-PA | 590..819 | 235..462 | 286 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14359-PA | 490 | GD14359-PA | 1..490 | 1..492 | 2590 | 98.4 | Plus |
Dsim\GD11643-PA | 720 | GD11643-PA | 460..704 | 221..465 | 379 | 33.7 | Plus |
Dsim\GD16910-PA | 825 | GD16910-PA | 594..823 | 235..462 | 285 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12317-PA | 479 | GJ12317-PA | 1..463 | 1..479 | 1965 | 76 | Plus |
Dvir\GJ21845-PA | 714 | GJ21845-PA | 452..698 | 219..465 | 365 | 32.7 | Plus |
Dvir\GJ18512-PA | 884 | GJ18512-PA | 654..880 | 235..463 | 309 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17546-PA | 486 | GK17546-PA | 1..480 | 1..491 | 1901 | 73.9 | Plus |
Dwil\GK21393-PA | 726 | GK21393-PA | 464..710 | 219..465 | 346 | 32.7 | Plus |
Dwil\GK16461-PA | 799 | GK16461-PA | 562..793 | 235..464 | 249 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21885-PA | 491 | GE21885-PA | 1..491 | 1..492 | 2567 | 97.2 | Plus |
Dyak\GE12240-PA | 720 | GE12240-PA | 460..701 | 221..462 | 371 | 33.7 | Plus |
Dyak\GE15796-PA | 830 | GE15796-PA | 599..828 | 235..462 | 290 | 28.6 | Plus |