BDGP Sequence Production Resources |
Search the DGRC for GH12548
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 125 |
Well: | 48 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11236-RA |
Protein status: | GH12548.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1178 |
Gene | Date | Evidence |
---|---|---|
CG11236 | 2001-01-01 | Release 2 assignment |
CG11236 | 2002-02-26 | Blastp of sequenced clone |
CG11236 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11236 | 2008-04-29 | Release 5.5 accounting |
CG11236 | 2008-08-15 | Release 5.9 accounting |
CG11236 | 2008-12-18 | 5.12 accounting |
1178 bp (1178 high quality bases) assembled on 2002-02-26
GenBank Submission: AY089502
> GH12548.complete CTGATCGGATTGGAGCAATGCCTAACATTGCAGTTATCGGTGCCGGGGTT AATGGTGTTGCCAGTGCCATTAAGATACTGGAACACTATGTGAACGATGG AAAGACACCCATAAAGGTGACGATCATATCGGAGGACTTCACGCCTAACA CAACTGGAGATGGTTCGGCTGGTCTCTGGGGTCCGTACCTTCTGGGCGGC ACTTCGCAGGCGAAAGTCTACAAGTGGTCGAAGAGCATGCACCAATTTTT GGAGAAGATCTGGCTGAGCGAGGATGCCGGAGAGGCTGGCGTTTGTCTGC TACCCTGCATTCGGCTGAGCACCTCAACGGTGGACACGGTCGAAGATTTT TGGCGTGACATTGTCTATGGAGCAGTGGATCTGTCCAAGGAACAGCTGGC TGCCTACAATAAAGGTCGCAGCGTTAAGTTCACGTCTGGTTTATCCTTTG TTACCTACACCTCGGAGCCCATTAAGCTACTGCCGTATTTGATGAAGCGT TTCACCCGAAATGGAGGTGTTGTTGTCCGGAAAAGGATTACAGACCTGGA TGCATTTGTAGCCGATTCCGAGTACGATGTGATAGTCAATTGCTCCGGAT TGGGCTCTAAGACCCTACTAAACGACGATCAAATGTACGCAGTGCGTGGC CAAGTTTCCCGGGTGAGGGCCAACTGGATTTTCTCTGCCGTGCTGGACGA GAGTGATGATGGCAACTATATTATACCCAACACCGAAAGTGTTGTCCTGG GCGGAACCCATCAGGAGCGGGACTACAACACTAAAGTCTGCCAGAACGAC AGGCGGATGATCGTCGATGGCTGTCAGCGGTACATTCCTGGTTTGGAGCA CACGGAGTGCCTCTTTGATTGGGTAGGTCTCCGGCCGGGTCGCACCCAAC TCCGACTGGAAGCCGAGCGCCGCGGCCGCAAGCTCCTCATCCACAACTAT GGACATGGCGGCAGTGGAGTCACTTTGTGCTGGGGCTGTGCCGACGATGT CCTCAATATCCTGTTGGCCGCCAAGAACGGTTCCAAATTATAAGTCAGTT GGAAAGATTATTATTTTAGTTCTATAACAAAATTGGTAGTGTAAAGGTAA CAGCATTTAAAAGCATCTCTTTATCTACATAATAAACATTTTAATATATT TCATTACAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 6802995..6803421 | 731..1157 | 2105 | 99.5 | Plus |
chr2L | 23010047 | chr2L | 6802641..6802937 | 434..730 | 1485 | 100 | Plus |
chr2L | 23010047 | chr2L | 6802084..6802303 | 1..220 | 1100 | 100 | Plus |
chr2L | 23010047 | chr2L | 6802359..6802573 | 221..435 | 1075 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6803946..6804373 | 731..1158 | 2140 | 100 | Plus |
2L | 23513712 | 2L | 6803592..6803888 | 434..730 | 1485 | 100 | Plus |
2L | 23513712 | 2L | 6803035..6803254 | 1..220 | 1100 | 100 | Plus |
2L | 23513712 | 2L | 6803310..6803524 | 221..435 | 1075 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6803946..6804373 | 731..1158 | 2140 | 100 | Plus |
2L | 23513712 | 2L | 6803592..6803888 | 434..730 | 1485 | 100 | Plus |
2L | 23513712 | 2L | 6803035..6803254 | 1..220 | 1100 | 100 | Plus |
2L | 23513712 | 2L | 6803310..6803524 | 221..435 | 1075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6802084..6802303 | 1..220 | 100 | -> | Plus |
chr2L | 6802359..6802571 | 221..433 | 100 | -> | Plus |
chr2L | 6802641..6802937 | 434..730 | 100 | -> | Plus |
chr2L | 6802995..6803421 | 731..1157 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11236-RA | 1..1026 | 18..1043 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11236-RA | 1..1026 | 18..1043 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11236-RA | 1..1026 | 18..1043 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11236-RA | 1..1026 | 18..1043 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11236-RA | 1..1026 | 18..1043 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11236-RA | 3..1159 | 1..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11236-RA | 3..1159 | 1..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11236-RA | 25..1181 | 1..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11236-RA | 3..1159 | 1..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11236-RA | 25..1181 | 1..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6803035..6803254 | 1..220 | 100 | -> | Plus |
2L | 6803310..6803522 | 221..433 | 100 | -> | Plus |
2L | 6803592..6803888 | 434..730 | 100 | -> | Plus |
2L | 6803946..6804372 | 731..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6803035..6803254 | 1..220 | 100 | -> | Plus |
2L | 6803310..6803522 | 221..433 | 100 | -> | Plus |
2L | 6803592..6803888 | 434..730 | 100 | -> | Plus |
2L | 6803946..6804372 | 731..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6803035..6803254 | 1..220 | 100 | -> | Plus |
2L | 6803310..6803522 | 221..433 | 100 | -> | Plus |
2L | 6803592..6803888 | 434..730 | 100 | -> | Plus |
2L | 6803946..6804372 | 731..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6803035..6803254 | 1..220 | 100 | -> | Plus |
arm_2L | 6803310..6803522 | 221..433 | 100 | -> | Plus |
arm_2L | 6803592..6803888 | 434..730 | 100 | -> | Plus |
arm_2L | 6803946..6804372 | 731..1157 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6803035..6803254 | 1..220 | 100 | -> | Plus |
2L | 6803310..6803522 | 221..433 | 100 | -> | Plus |
2L | 6803592..6803888 | 434..730 | 100 | -> | Plus |
2L | 6803946..6804372 | 731..1157 | 100 | Plus |
Translation from 2 to 1042
> GH12548.hyp DRIGAMPNIAVIGAGVNGVASAIKILEHYVNDGKTPIKVTIISEDFTPNT TGDGSAGLWGPYLLGGTSQAKVYKWSKSMHQFLEKIWLSEDAGEAGVCLL PCIRLSTSTVDTVEDFWRDIVYGAVDLSKEQLAAYNKGRSVKFTSGLSFV TYTSEPIKLLPYLMKRFTRNGGVVVRKRITDLDAFVADSEYDVIVNCSGL GSKTLLNDDQMYAVRGQVSRVRANWIFSAVLDESDDGNYIIPNTESVVLG GTHQERDYNTKVCQNDRRMIVDGCQRYIPGLEHTECLFDWVGLRPGRTQL RLEAERRGRKLLIHNYGHGGSGVTLCWGCADDVLNILLAAKNGSKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11236-PA | 341 | CG11236-PA | 1..341 | 6..346 | 1799 | 100 | Plus |
CG11236-PB | 338 | CG11236-PB | 1..338 | 6..346 | 1771 | 99.1 | Plus |
CG12338-PB | 335 | CG12338-PB | 2..318 | 8..330 | 408 | 31.8 | Plus |
CG12338-PA | 335 | CG12338-PA | 2..318 | 8..330 | 408 | 31.8 | Plus |
Translation from 17 to 1042
> GH12548.pep MPNIAVIGAGVNGVASAIKILEHYVNDGKTPIKVTIISEDFTPNTTGDGS AGLWGPYLLGGTSQAKVYKWSKSMHQFLEKIWLSEDAGEAGVCLLPCIRL STSTVDTVEDFWRDIVYGAVDLSKEQLAAYNKGRSVKFTSGLSFVTYTSE PIKLLPYLMKRFTRNGGVVVRKRITDLDAFVADSEYDVIVNCSGLGSKTL LNDDQMYAVRGQVSRVRANWIFSAVLDESDDGNYIIPNTESVVLGGTHQE RDYNTKVCQNDRRMIVDGCQRYIPGLEHTECLFDWVGLRPGRTQLRLEAE RRGRKLLIHNYGHGGSGVTLCWGCADDVLNILLAAKNGSKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15429-PA | 341 | GF15429-PA | 1..341 | 1..341 | 1571 | 83.6 | Plus |
Dana\GF11092-PA | 335 | GF11092-PA | 2..325 | 3..332 | 422 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10434-PA | 341 | GG10434-PA | 1..341 | 1..341 | 1660 | 88 | Plus |
Dere\GG22723-PA | 335 | GG22723-PA | 2..332 | 3..339 | 421 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13713-PA | 341 | GH13713-PA | 1..341 | 1..341 | 1418 | 74.8 | Plus |
Dgri\GH24186-PA | 335 | GH24186-PA | 2..335 | 3..341 | 424 | 31.7 | Plus |
Dgri\GH20617-PA | 335 | GH20617-PA | 2..335 | 3..341 | 422 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11236-PA | 341 | CG11236-PA | 1..341 | 1..341 | 1799 | 100 | Plus |
CG11236-PB | 338 | CG11236-PB | 1..338 | 1..341 | 1771 | 99.1 | Plus |
CG12338-PB | 335 | CG12338-PB | 2..318 | 3..325 | 408 | 31.8 | Plus |
CG12338-PA | 335 | CG12338-PA | 2..318 | 3..325 | 408 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23973-PA | 341 | GI23973-PA | 1..341 | 1..341 | 1446 | 76.8 | Plus |
Dmoj\GI20172-PA | 335 | GI20172-PA | 2..325 | 3..332 | 426 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26186-PA | 342 | GL26186-PA | 1..342 | 1..341 | 1571 | 83.3 | Plus |
Dper\GL17186-PA | 335 | GL17186-PA | 2..325 | 3..332 | 430 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10855-PA | 342 | GA10855-PA | 1..342 | 1..341 | 1563 | 83 | Plus |
Dpse\GA24279-PA | 327 | GA24279-PA | 1..257 | 1..256 | 1179 | 84.4 | Plus |
Dpse\GA28065-PA | 199 | GA28065-PA | 4..199 | 146..341 | 877 | 79.6 | Plus |
Dpse\GA11563-PA | 335 | GA11563-PA | 2..325 | 3..332 | 430 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16217-PA | 341 | GM16217-PA | 1..341 | 1..341 | 1738 | 95 | Plus |
Dsec\GM20499-PA | 335 | GM20499-PA | 2..318 | 3..325 | 414 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23432-PA | 341 | GD23432-PA | 1..341 | 1..341 | 1761 | 96.5 | Plus |
Dsim\GD25962-PA | 335 | GD25962-PA | 2..318 | 3..325 | 424 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21247-PA | 341 | GJ21247-PA | 1..341 | 1..341 | 1451 | 77.1 | Plus |
Dvir\GJ20129-PA | 335 | GJ20129-PA | 2..325 | 3..332 | 446 | 31.8 | Plus |