![]() | BDGP Sequence Production Resources |
Search the DGRC for GH12549
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 125 |
Well: | 49 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6282-RA |
Protein status: | GH12549.pep: gold |
Preliminary Size: | 3434 |
Sequenced Size: | 3321 |
Gene | Date | Evidence |
---|---|---|
CG6282 | 2001-01-01 | Release 2 assignment |
CG6282 | 2001-07-04 | Blastp of sequenced clone |
CG6282 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6282 | 2008-04-29 | Release 5.5 accounting |
CG6282 | 2008-08-15 | Release 5.9 accounting |
CG6282 | 2008-12-18 | 5.12 accounting |
3321 bp (3321 high quality bases) assembled on 2001-07-04
GenBank Submission: AY060283
> GH12549.complete TCGTCTGTTGCGTCGGTTGCTCGAGTCCCTTCCGTTGGCCAAAAAACTCG CGGCGGCCGTTCTGTTTGTTTTCGCCTCGTAGATGCTGTCTGCAATCAAG AAGCAAAAAAAAAGGCATTGAAAGCAATAAAAACCAGAGCCAGCGCGGCA ACAAGGAGAGAAATTAAGCGTTAGAGCGGCAGGAAACAAACAAAAAAAAA TCGTAACTAATCACCAGGCCACTTTTGGCCATTTTGTGGCATAAGCGGAA ACGGAAATAGACGACCCCAATATAAACAATCATCACATAAATACGTAATC AACAAGCGGCCCCAAAAAAAAGGCAGACAGCGACTCCTTGGCAGGCGTCC AACGCCATAGACCACCACCACCCGCCATCCACACCACCCAGCCACCCAAC CACTGAGCCACCCACCACAGCATGTAAAGCCCTGTGGGCGGTGGGAGTGG CACACACAGACAGCACTTTGAAGGCGACTTTTGGCTAGGTGTGGATGAAG CGATGTGAAGGCACAACATTTTGCAATATTAAAGAACAGCAAAGGGAAGG AGGAGCCAGAGGAGCAGGAGGAGCAGGTGGGTCAGGTGGACAAAGACCAG GACCTGTTGCCAACACGTCCACAAAGCGAGCGGATTGGGTGAAAGCCTGT CTGGCTGGGTGAAAGGTGAAAGCCGAGCGCCGCAACACAATGGCCGTAAA TGTACTGGACTACGATCACTTCGCCATTAGCGCCATCGTGGTGGGGAGCC TGCAGTTGGTCTTCTTTCTGATCAACTCTGTGCTCCAAATGGACAAGCTG ACGGACTTTGCCGGCGGCGTTAACTTCATCATCATCTCCCTGCTCACTTT CTTTCTCGGCCAAATCGATCGTCCATCGAAGGCCTACGATAGTCGCCAGC TGATGGTCACGCTCTTCGTTTGCCTGTGGGGCGCTCGGCTGTCCGGATAT TTACTATATCGAATCGTAAAGTTGGGTCGCGACAAACAGTTCGAGGATAC CCGTCGCAACATCATCCGCTATGCGGTCTTCTGGACCTTCCAGGCTGTTT GGGTGTACATTGTGTCACTGCCTGTAATAATAATTAATTCACCGCGCCAC TCGCAGCCGCGTGCCCCAAAGACCATGACCACACTGGACTCCACGGGCAC GGGCATGTTCATCGTTGGCCTGCTGGCGGAGACCTATGCGGATCTGCAGA AGTTCTCCTTCCGCCAGGATCCGGCCAATCAGGGCAAGTTCTGCAATGAT GGACTGTGGAGCGTGTCGCGGCATCCGAACTACTTTGGCGAAGTGGTCAT CTGGTGGGGCATCTTTGCCATATCCCTCAATGTGATCAGTGGCCACGAGT GGGTGGCGATTGCCTCGCCCATTTTCACTACGATGATCATTCTCTTTCTG TCGGGGATTCCCCTGCGAGAACGAAGCGCCGATGAGAAGTACAAAGATCA ACTGGAGTACCGGAAGTACAAAGCCTCCACCTCGCCACTGATACCAGTGC CTCCTGCTGTCTACGTGGAGGTGCCCAGTGCTTTGAAGTTCATCCTGTGC TGCGAGTTCCCCATCTACGATTCGATGCGAATTCAAAAGGACCTCAGTCC ATACTCCCTGTCCATAGCACGCTCCCACTCGCACATCTAGCAGTCAGTGG CCCACTCCAGCAGTGCAGCTGGGGTGGGTCAGATGAATGCCCATGGCCAT TCGGTGGGTCACTCCCTACACCGGGGTCAGTGCTATGGAGCCAATGGCGG CGATGCCGAGAGCCACCAGAACTGCGGCGGTAGCTGCCGGAACGTGCACG TCAAGTCGAATCCGTACCAGTGCGAGGCGGGCTATGGCCACTATCCGGTT TGCCACACGGACGACGATACGGATGACGGAATCATTTACATGGACCGCAC CCACTTCTACCACGACCAGGAGCAGGCGCACGTGGTGAAATCGGTGGCGG TTCCCAGTACAAAGTGCAGCTACCTGGCCGAGGAGGAGCTGGCCTCCGAC TACGATGAGGATGTGCCGGCCATCGATCTCAGCAAGGCCACCAGTGTGGA GAGCTTAGGCACCCGGGTGCAGACGGAGCATGCCGTGAACGCCGATGGGT TGCCCGTGACAGTGACCACGATTTTGTGATTGCCACTTTAAGATTTGGTC GCGATCAGTGTCAGGTTATTCGGATCGGGTTTTTATATCGGTTGTACAAC GGGTGGAACTCTTTTGCTCGAATTTTATACCTTTGAAATGATTATCTGCT TTTTGGGGGATATAATTGTTCAGCAAATTCATGCCGCGAAGTAATATTCT TCTATACTAATGAGATATATTTATTCGCAATTTGGTAAATAGATAAAGAT ATCTGTTTTTTGCAAAATAAGCTGGGCACAAATAAATCAAATTTAAAAGT CTTAAATCTAATTTCGGTGTGTAAAGGACAAAGATAAGAAATGTTAGGAG ATCGATGGTAAAAAATCTTTTTTCAAACCAAAACCTCGTAGTCCAAGATG AATGTTCTTGTATATAGAATGAATAACCAAATATGTTAAAGATATTAGAT ATAAAATTCTTTCCACACTCTTGTGCATAATTGAAGCCAGGCCTAAAAGT GCTGGCCCGAAATGACATTTTTTTTTGATGACGAATGCCAAAGTACCGTA GAGTACCCAGCATCATGGATACTCACAGCTGTTTAACACTCTAGTCTCTA TGCTACTGTTGCTCAAATAACTAATGTGCCTCTTATGTGCTCTGCGCACC CCTAGATTGTTGCACTCCTTCAAAGTTTACGCTAGTCTCTGTTGAATCCA CTGTTGCTCCCCCCTCTCAAAGAACGAACTTCAACTATATAGACCTGTAG CTATATCTAATATACATATATCTATTTCTCAACTGCATACTTTCGCATTA AACCGCGAACCGCAAACCACACACCCCACCAAACGAAAGGAATCGAATCT GAAGCCATTTAAACTAAAACATATCCCGAGGCAACGGCAACCCAACCAAA GGACGATTTACACATACAATAAGTACAAGAATTGTCGCAGTGAATTACGA TAGAGGACGTTCGATAGCCAATGTTATTTTATATACCGGAATATATGTAT GTATATCTGCTCACTGTAGCTAAATCGAAATATACCCATGTATGGAAGTT ACCACAAATGTTGCCCCATTAGTGTACGTATACGTGACGTGTCTGTGTCT AGTTGGTGTCTCAAATGTTAAGCAGTATTATAACTAATGAACGAATTGTA CCTAAATGATTATGCTGAGTATGGAAACTAATAAACGAAACCAAAGTAAA TGTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6282-RA | 3483 | CG6282-RA | 41..3346 | 1..3306 | 16515 | 99.9 | Plus |
CG6282-RC | 3679 | CG6282-RC | 495..3542 | 259..3306 | 15240 | 100 | Plus |
CG6282-RB | 3791 | CG6282-RB | 607..3654 | 259..3306 | 15240 | 100 | Plus |
CG6282-RC | 3679 | CG6282-RC | 41..304 | 1..264 | 1290 | 99.2 | Plus |
CG6282-RB | 3791 | CG6282-RB | 41..242 | 1..202 | 995 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 8607244..8609099 | 1448..3303 | 9280 | 100 | Plus |
chr3L | 24539361 | chr3L | 8601759..8602382 | 259..882 | 3120 | 100 | Plus |
chr3L | 24539361 | chr3L | 8606625..8606835 | 1042..1252 | 1055 | 100 | Plus |
chr3L | 24539361 | chr3L | 8596675..8596921 | 1..258 | 1025 | 95 | Plus |
chr3L | 24539361 | chr3L | 8606892..8607088 | 1251..1447 | 985 | 100 | Plus |
chr3L | 24539361 | chr3L | 8605681..8605845 | 880..1044 | 825 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 8615219..8617077 | 1448..3306 | 9295 | 100 | Plus |
3L | 28110227 | 3L | 8609734..8610357 | 259..882 | 3120 | 100 | Plus |
3L | 28110227 | 3L | 8604657..8604914 | 1..258 | 1275 | 99.6 | Plus |
3L | 28110227 | 3L | 8614600..8614810 | 1042..1252 | 1055 | 100 | Plus |
3L | 28110227 | 3L | 8614867..8615063 | 1251..1447 | 985 | 100 | Plus |
3L | 28110227 | 3L | 8613656..8613820 | 880..1044 | 825 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 8608319..8610177 | 1448..3306 | 9295 | 100 | Plus |
3L | 28103327 | 3L | 8602834..8603457 | 259..882 | 3120 | 100 | Plus |
3L | 28103327 | 3L | 8597757..8598014 | 1..258 | 1275 | 99.6 | Plus |
3L | 28103327 | 3L | 8607700..8607910 | 1042..1252 | 1055 | 100 | Plus |
3L | 28103327 | 3L | 8607967..8608163 | 1251..1447 | 985 | 100 | Plus |
3L | 28103327 | 3L | 8606756..8606920 | 880..1044 | 825 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 8596675..8596921 | 1..258 | 94 | -> | Plus |
chr3L | 8601759..8602381 | 259..881 | 92 | -> | Plus |
chr3L | 8605683..8605844 | 882..1043 | 100 | -> | Plus |
chr3L | 8606627..8606834 | 1044..1251 | 100 | -> | Plus |
chr3L | 8606893..8607088 | 1252..1447 | 100 | -> | Plus |
chr3L | 8607244..8609099 | 1448..3303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6282-RC | 1..951 | 690..1640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6282-RC | 1..951 | 690..1640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6282-RD | 1..1440 | 690..2129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6282-RB | 1..951 | 690..1640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6282-RD | 1..1440 | 690..2129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6282-RA | 1..3303 | 1..3303 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6282-RA | 1..3303 | 1..3303 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6282-RA | 1..3303 | 1..3303 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6282-RA | 1..3303 | 1..3303 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6282-RA | 1..3303 | 1..3303 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8604657..8604914 | 1..258 | 99 | -> | Plus |
3L | 8609734..8610356 | 259..881 | 100 | -> | Plus |
3L | 8613658..8613819 | 882..1043 | 100 | -> | Plus |
3L | 8614602..8614809 | 1044..1251 | 100 | -> | Plus |
3L | 8614868..8615063 | 1252..1447 | 100 | -> | Plus |
3L | 8615219..8617074 | 1448..3303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8604657..8604914 | 1..258 | 99 | -> | Plus |
3L | 8609734..8610356 | 259..881 | 100 | -> | Plus |
3L | 8613658..8613819 | 882..1043 | 100 | -> | Plus |
3L | 8614602..8614809 | 1044..1251 | 100 | -> | Plus |
3L | 8614868..8615063 | 1252..1447 | 100 | -> | Plus |
3L | 8615219..8617074 | 1448..3303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8604657..8604914 | 1..258 | 99 | -> | Plus |
3L | 8609734..8610356 | 259..881 | 100 | -> | Plus |
3L | 8613658..8613819 | 882..1043 | 100 | -> | Plus |
3L | 8614602..8614809 | 1044..1251 | 100 | -> | Plus |
3L | 8614868..8615063 | 1252..1447 | 100 | -> | Plus |
3L | 8615219..8617074 | 1448..3303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 8597757..8598014 | 1..258 | 99 | -> | Plus |
arm_3L | 8602834..8603456 | 259..881 | 100 | -> | Plus |
arm_3L | 8606758..8606919 | 882..1043 | 100 | -> | Plus |
arm_3L | 8607702..8607909 | 1044..1251 | 100 | -> | Plus |
arm_3L | 8607968..8608163 | 1252..1447 | 100 | -> | Plus |
arm_3L | 8608319..8610174 | 1448..3303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8606758..8606919 | 882..1043 | 100 | -> | Plus |
3L | 8607702..8607909 | 1044..1251 | 100 | -> | Plus |
3L | 8607968..8608163 | 1252..1447 | 100 | -> | Plus |
3L | 8597757..8598014 | 1..258 | 99 | -> | Plus |
3L | 8602834..8603456 | 259..881 | 100 | -> | Plus |
3L | 8608319..8610174 | 1448..3303 | 100 | Plus |
Translation from 689 to 1639
> GH12549.pep MAVNVLDYDHFAISAIVVGSLQLVFFLINSVLQMDKLTDFAGGVNFIIIS LLTFFLGQIDRPSKAYDSRQLMVTLFVCLWGARLSGYLLYRIVKLGRDKQ FEDTRRNIIRYAVFWTFQAVWVYIVSLPVIIINSPRHSQPRAPKTMTTLD STGTGMFIVGLLAETYADLQKFSFRQDPANQGKFCNDGLWSVSRHPNYFG EVVIWWGIFAISLNVISGHEWVAIASPIFTTMIILFLSGIPLRERSADEK YKDQLEYRKYKASTSPLIPVPPAVYVEVPSALKFILCCEFPIYDSMRIQK DLSPYSLSIARSHSHI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24337-PA | 474 | GF24337-PA | 1..317 | 1..315 | 1617 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14329-PA | 463 | GG14329-PA | 1..320 | 1..315 | 1624 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15317-PA | 315 | GH15317-PA | 1..315 | 1..316 | 1420 | 85.1 | Plus |
Dgri\GH22521-PA | 477 | GH22521-PA | 1..320 | 1..315 | 1390 | 82.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6282-PD | 479 | CG6282-PD | 1..316 | 1..316 | 1643 | 100 | Plus |
CG6282-PC | 316 | CG6282-PC | 1..316 | 1..316 | 1643 | 100 | Plus |
CG6282-PB | 316 | CG6282-PB | 1..316 | 1..316 | 1643 | 100 | Plus |
CG6282-PA | 316 | CG6282-PA | 1..316 | 1..316 | 1643 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12913-PA | 472 | GI12913-PA | 1..309 | 1..310 | 1443 | 82.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10323-PA | 483 | GL10323-PA | 1..326 | 1..315 | 1554 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19486-PA | 316 | GA19486-PA | 1..316 | 1..316 | 1640 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25072-PA | 316 | GM25072-PA | 1..316 | 1..316 | 1677 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14109-PA | 316 | GD14109-PA | 1..316 | 1..316 | 1677 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13055-PA | 315 | GJ13055-PA | 1..315 | 1..316 | 1438 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13083-PA | 479 | GK13083-PA | 1..272 | 1..272 | 1390 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20757-PA | 462 | GE20757-PA | 1..320 | 1..315 | 1621 | 95.6 | Plus |
Translation from 689 to 1639
> GH12549.hyp MAVNVLDYDHFAISAIVVGSLQLVFFLINSVLQMDKLTDFAGGVNFIIIS LLTFFLGQIDRPSKAYDSRQLMVTLFVCLWGARLSGYLLYRIVKLGRDKQ FEDTRRNIIRYAVFWTFQAVWVYIVSLPVIIINSPRHSQPRAPKTMTTLD STGTGMFIVGLLAETYADLQKFSFRQDPANQGKFCNDGLWSVSRHPNYFG EVVIWWGIFAISLNVISGHEWVAIASPIFTTMIILFLSGIPLRERSADEK YKDQLEYRKYKASTSPLIPVPPAVYVEVPSALKFILCCEFPIYDSMRIQK DLSPYSLSIARSHSHI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6282-PC | 316 | CG6282-PC | 1..316 | 1..316 | 1643 | 100 | Plus |
CG6282-PB | 316 | CG6282-PB | 1..316 | 1..316 | 1643 | 100 | Plus |
CG6282-PA | 316 | CG6282-PA | 1..316 | 1..316 | 1643 | 100 | Plus |
CG6282-PD | 479 | CG6282-PD | 1..316 | 1..316 | 1643 | 100 | Plus |