Clone GH12558 Report

Search the DGRC for GH12558

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:125
Well:58
Vector:pOT2
Associated Gene/TranscriptMtpalpha-RA
Protein status:GH12558.pep: gold
Preliminary Size:2718
Sequenced Size:2712

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4389 2000-02-14 Blastp of sequenced clone
CG4389 2001-01-01 Release 2 assignment
CG4389 2003-01-01 Sim4 clustering to Release 3
CG4389 2008-04-29 Release 5.5 accounting
CG4389 2008-08-15 Release 5.9 accounting
CG4389 2008-12-18 5.12 accounting

Clone Sequence Records

GH12558.complete Sequence

2712 bp (2712 high quality bases) assembled on 2000-02-14

GenBank Submission: AF181648

> GH12558.complete
ACAAGTAGAAATTGCCGCATAGTTTTTTATAGCGAATCGCGAACACATAA
CTAACGGTGCATGATCAAAGTTCGTTAAAAATTAAAACAAATAGTTATCG
TAAGCAAAAAGTGACTATCTTATAAGATCGAACTGAGAGCAATGTCGGCA
ACGAGGTTTTTGAGTGCCGTTGGCCAAATTTCGCGACAGCAATTGCTGCA
GAATAAGTGCACCAGAGCCCTGCCCATTTCGGCCCAGCTTCTCCAGAGGC
GCCGCCTAATGTCCACGAATCCCGCACCGGTTGCCAACAAGCATCTCCAC
ACCAAGGTGGTCAATGGAGTGCTTGTGATCAAGATCGACTCACCCAATGC
CAAGGTGAATTCCCTGGGCTCCGAAGTGAGCGATGAGTTCGAGCGAGTGA
TTAAGGACCTGGAGACGAATCCTGCCGTCAATTCCGCCGTGCTGATCTCG
GGCAAACCGGGCTGCTTTGTGGCCGGAGCCGACATCGGGATGCTGGAAGC
ATGCCAGACGGCGGAGGAGGCCACGCTGATCTCCCACGGCGCCCAGGTGA
TGTTCGATCGCATGGAGCGCAGCAAGAAGCCCATTGTGGCCGCCATCAGC
GGAGTCTGTCTGGGTGGTGGTCTGGAACTCGCCCTTGCCTGCCATTACCG
CATTGCCACCAAGGACAGCAAGACCAAACTGGGTCTGCCCGAGGTCATGC
TGGGTCTCCTGCCCGGCGGCGGTGGCACCGTCCGCCTGCCCAAGCTTACA
TCCGTGCCCACGGCTCTGGATATGGAGCTGACAGGCAAACAGGTGCGCGC
CGATCGCGCCAAACGACTGGGCATCGTGGATCTGTTGGTGGATCCCCTAG
GTCCTGGACTCCAGCCTGCTGAGCAAAACACTATCGAGTACCTGGAGAAG
ACCGCCGTGCAGGTCGCCAACGATCTGGCTAGTGGTAAACTTCGCGTAAA
TCGCGAGAAAAGCGGTCTCGTCAGCAAGATCCAGTCCTTCGTCATGGACA
CCGACTTTGTGAAGAACAAGATTTTCGACACTGCCAGGAAACAGGTGCTC
AAGGCCTCGAACGGTCTCTATCCCGCTCCTCTGAAGATTCTCGATGTGAT
CCGTGCTGGCGTGGATAAGGGAACCGATGCCGGTTACGAGGCGGAGCGCA
AGGGCTTCGGCGAGCTATCGGCCACGCCCGAGTCGAAGGGTTTGATTGCC
CTGTTCCGTGGACAAACGGAGTGCAAGAAGAACCGATTTGGCAAGCCAGA
GCGTCCGGTTAAGACTGTGGGTGTGCTGGGAGCTGGTCTGATGGGCGCCG
GTATTGTACAGGTCTCCGTCGATAAGGGATATCAGGTGGTGATGAAGGAT
GCCACCGAAGCCGGCCTGGCTCGTGGTATTGGACAAGTGCAGAAGGGTTT
GGAGACGGCTGTGAAGCGCAAGCGAATCTCTGCACTGGAGCGCGATCAGA
CTCTTGCCAGTCTGCGGCCCACTCTTGATTACAGCGACTTCAAGAACGCA
GACATCATCATCGAAGCTGTTTTCGAGGACATCAAGGTTAAGCATCGAGT
GATCAAGGAGCTGGAAGCAGTGGTTCCAGAGCACTGCGTCATTGCCACCA
ACACCAGCGCCATTCCCATCACCAAGATTGCTGCTGGAAGCTCGCGTCCC
GAGAAGGTTGTTGGCATGCACTACTTCTCGCCCGTGGACAAGATGCAGCT
GCTGGAAATCATCACTCACCCAGGAACCTCCAAGGACACCATCGCACAGG
CCGTGGCCGTCGGTCTCAAGCAAGGCAAGGTCGTTATCACTGTTGGTGAC
GGACCTGGCTTCTATACCACCCGCATCCTCTCCACCATGCTGTCGGAAGC
CATCAGACTGCTGCAGGAAGGCGTGGACCCCAAGGATCTGGACCAATACA
CGAAGAAGTTTGGCTTCCCCGTGGGTGCTGCGACCCTTGCGGATGAGGTT
GGCATTGACGTGGGTTCCCACATTGCCGTCGACTTGGCAAAGGCATTCGG
CGAACGTTTCAGCGGTGGAAACTTGGAAGTAATGAATGATCTGGTCCTGG
CTGGTTTCCTCGGACGCAAGTCCGGCAAGGGTATCTTCCTGTACGATGGC
CAGAAGAGGGGCACTCGTCCAGTGAACAACGATGCTCTCGAAATCGTGAA
ACAAAAGTACGCTTTAGTCTCAAAGGGAGCCAATGCCCCCGAGGATCTGA
CGCTGCGTATGGTATCCCGCTTCATCAACGAAGCCGTGCTCTGTCTGGAG
GAGAAGATTCTGGACAGTCCGCTGGAGGGCGATGTCGGAGCCGTGTTCGG
CCTGGGCTTCCCGCCATTCTCCGGTGGTCCCTTCCGCTGGGTCGATCAGT
ATGGAGCCGGCAAACTGGTCAGCAAGATGCAATCCTATGCTGAGCTGTAC
GGAGCTCCCTTCAAGCCCGCTCAGACCCTGCTCGACATGGCTAAGGACCC
GTCGAAGAAGTTCTACCCCAAGACTGGCTCCTCGAAGTTGTAGATCCGAT
CCAATCCGATCCCAGCCTCCGTAGAGCCGCTAACGAAATTTAGCTTTTAG
TGCGAAGATAAGTCGTGTCCTTGTGCATTTCTCTCAGAAAGGAAACCTAT
TGTGGTCCATCGCTGCCTAAAAAATGGGGCAAGGCCCAATAAAAAGCCCT
CTGTTGAAGTTGTCGACAATTAAATTAAAGTTTACCGTGTAAAAAAAAAA
AAAAAAAAAAAA

GH12558.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:40:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG4389-RA 2734 CG4389-RA 35..2726 1..2692 13460 100 Plus
CG4389-RB 2875 CG4389-RB 401..2875 216..2690 12375 100 Plus
CG4389-RC 2597 CG4389-RC 127..2597 218..2688 12355 100 Plus
CG4389-RB 2875 CG4389-RB 35..252 1..218 1090 100 Plus
CG4389-RC 2597 CG4389-RC 28..126 1..99 495 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:49:48
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 9572403..9573240 2690..1853 4190 100 Minus
chr2L 23010047 chr2L 9573299..9574070 1856..1085 3860 100 Minus
chr2L 23010047 chr2L 9574328..9575061 949..216 3655 99.9 Minus
chr2L 23010047 chr2L 9575348..9575564 217..1 1085 100 Minus
chr2L 23010047 chr2L 9574121..9574265 1090..946 710 99.3 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:47:03 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:49:46
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9573571..9574410 2692..1853 4200 100 Minus
2L 23513712 2L 9574469..9575240 1856..1085 3860 100 Minus
2L 23513712 2L 9575498..9576231 949..216 3670 100 Minus
2L 23513712 2L 9576518..9576734 217..1 1085 100 Minus
2L 23513712 2L 9575291..9575435 1090..946 710 99.3 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:01:30
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9573571..9574410 2692..1853 4200 100 Minus
2L 23513712 2L 9574469..9575240 1856..1085 3860 100 Minus
2L 23513712 2L 9575498..9576231 949..216 3670 100 Minus
2L 23513712 2L 9576518..9576734 217..1 1085 100 Minus
2L 23513712 2L 9575291..9575435 1090..946 710 99.3 Minus
Blast to na_te.dros performed on 2019-03-15 19:49:46 has no hits.

GH12558.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:50:45 Download gff for GH12558.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 9572403..9573236 1857..2690 100 <- Minus
chr2L 9573299..9574068 1087..1856 100 <- Minus
chr2L 9574125..9574265 946..1086 100 <- Minus
chr2L 9574332..9575059 218..945 99 <- Minus
chr2L 9575348..9575564 1..217 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:38:24 Download gff for GH12558.complete
Subject Subject Range Query Range Percent Splice Strand
CG4389-RA 1..2352 142..2493 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:32:33 Download gff for GH12558.complete
Subject Subject Range Query Range Percent Splice Strand
CG4389-RA 1..2352 142..2493 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:58:51 Download gff for GH12558.complete
Subject Subject Range Query Range Percent Splice Strand
Mtpalpha-RA 1..2352 142..2493 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:06:55 Download gff for GH12558.complete
Subject Subject Range Query Range Percent Splice Strand
CG4389-RA 1..2352 142..2493 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:24:53 Download gff for GH12558.complete
Subject Subject Range Query Range Percent Splice Strand
Mtpalpha-RA 1..2352 142..2493 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:34:23 Download gff for GH12558.complete
Subject Subject Range Query Range Percent Splice Strand
CG4389-RA 35..2724 1..2690 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:32:33 Download gff for GH12558.complete
Subject Subject Range Query Range Percent Splice Strand
CG4389-RA 35..2724 1..2690 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:58:51 Download gff for GH12558.complete
Subject Subject Range Query Range Percent Splice Strand
Mtpalpha-RA 36..2725 1..2690 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:06:55 Download gff for GH12558.complete
Subject Subject Range Query Range Percent Splice Strand
CG4389-RA 35..2724 1..2690 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:24:53 Download gff for GH12558.complete
Subject Subject Range Query Range Percent Splice Strand
Mtpalpha-RA 36..2725 1..2690 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:50:45 Download gff for GH12558.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9576518..9576734 1..217 100   Minus
2L 9573573..9574406 1857..2690 100 <- Minus
2L 9574469..9575238 1087..1856 100 <- Minus
2L 9575295..9575435 946..1086 100 <- Minus
2L 9575502..9576229 218..945 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:50:45 Download gff for GH12558.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9576518..9576734 1..217 100   Minus
2L 9573573..9574406 1857..2690 100 <- Minus
2L 9574469..9575238 1087..1856 100 <- Minus
2L 9575295..9575435 946..1086 100 <- Minus
2L 9575502..9576229 218..945 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:50:45 Download gff for GH12558.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9576518..9576734 1..217 100   Minus
2L 9573573..9574406 1857..2690 100 <- Minus
2L 9574469..9575238 1087..1856 100 <- Minus
2L 9575295..9575435 946..1086 100 <- Minus
2L 9575502..9576229 218..945 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:58:51 Download gff for GH12558.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9573573..9574406 1857..2690 100 <- Minus
arm_2L 9574469..9575238 1087..1856 100 <- Minus
arm_2L 9575295..9575435 946..1086 100 <- Minus
arm_2L 9575502..9576229 218..945 100 <- Minus
arm_2L 9576518..9576734 1..217 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:44:31 Download gff for GH12558.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9573573..9574406 1857..2690 100 <- Minus
2L 9574469..9575238 1087..1856 100 <- Minus
2L 9575295..9575435 946..1086 100 <- Minus
2L 9575502..9576229 218..945 100 <- Minus
2L 9576518..9576734 1..217 100   Minus

GH12558.pep Sequence

Translation from 141 to 2492

> GH12558.pep
MSATRFLSAVGQISRQQLLQNKCTRALPISAQLLQRRRLMSTNPAPVANK
HLHTKVVNGVLVIKIDSPNAKVNSLGSEVSDEFERVIKDLETNPAVNSAV
LISGKPGCFVAGADIGMLEACQTAEEATLISHGAQVMFDRMERSKKPIVA
AISGVCLGGGLELALACHYRIATKDSKTKLGLPEVMLGLLPGGGGTVRLP
KLTSVPTALDMELTGKQVRADRAKRLGIVDLLVDPLGPGLQPAEQNTIEY
LEKTAVQVANDLASGKLRVNREKSGLVSKIQSFVMDTDFVKNKIFDTARK
QVLKASNGLYPAPLKILDVIRAGVDKGTDAGYEAERKGFGELSATPESKG
LIALFRGQTECKKNRFGKPERPVKTVGVLGAGLMGAGIVQVSVDKGYQVV
MKDATEAGLARGIGQVQKGLETAVKRKRISALERDQTLASLRPTLDYSDF
KNADIIIEAVFEDIKVKHRVIKELEAVVPEHCVIATNTSAIPITKIAAGS
SRPEKVVGMHYFSPVDKMQLLEIITHPGTSKDTIAQAVAVGLKQGKVVIT
VGDGPGFYTTRILSTMLSEAIRLLQEGVDPKDLDQYTKKFGFPVGAATLA
DEVGIDVGSHIAVDLAKAFGERFSGGNLEVMNDLVLAGFLGRKSGKGIFL
YDGQKRGTRPVNNDALEIVKQKYALVSKGANAPEDLTLRMVSRFINEAVL
CLEEKILDSPLEGDVGAVFGLGFPPFSGGPFRWVDQYGAGKLVSKMQSYA
ELYGAPFKPAQTLLDMAKDPSKKFYPKTGSSKL*

GH12558.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:13:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21951-PA 1092 GF21951-PA 308..1092 1..783 3800 93.2 Plus
Dana\GF11465-PA 299 GF11465-PA 48..219 59..234 268 38.6 Plus
Dana\GF11161-PA 293 GF11161-PA 50..227 60..252 226 32.8 Plus
Dana\GF18700-PA 353 GF18700-PA 88..247 71..233 186 34.8 Plus
Dana\GF11336-PA 315 GF11336-PA 4..211 374..578 182 28.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:13:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24022-PA 783 GG24022-PA 1..783 1..783 4032 97.8 Plus
Dere\GG22562-PA 299 GG22562-PA 47..218 58..233 258 37.5 Plus
Dere\GG22466-PA 294 GG22466-PA 51..253 60..261 236 33.5 Plus
Dere\GG12104-PA 329 GG12104-PA 63..220 73..233 191 33.3 Plus
Dere\GG19334-PA 315 GG19334-PA 8..220 376..584 164 25.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:13:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11058-PA 785 GH11058-PA 1..785 1..783 3559 85.8 Plus
Dgri\GH22640-PA 298 GH22640-PA 47..217 59..233 237 33.7 Plus
Dgri\GH20865-PA 293 GH20865-PA 28..216 38..233 229 31.9 Plus
Dgri\GH21207-PA 382 GH21207-PA 58..293 59..309 186 28.1 Plus
Dgri\GH21648-PA 328 GH21648-PA 61..218 73..233 185 35.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:08:46
Subject Length Description Subject Range Query Range Score Percent Strand
Mtpalpha-PA 783 CG4389-PA 1..783 1..783 3942 100 Plus
Mtpalpha-PB 744 CG4389-PB 1..744 40..783 3756 100 Plus
CG8778-PA 299 CG8778-PA 48..218 59..233 271 38.3 Plus
Echs1-PA 295 CG6543-PA 54..252 62..259 235 33.6 Plus
Echs1-PB 295 CG6543-PB 54..252 62..259 235 33.6 Plus
CG5611-PC 326 CG5611-PC 63..220 73..233 190 34 Plus
CG5611-PA 326 CG5611-PA 63..220 73..233 190 34 Plus
Had1-PB 315 CG9914-PB 8..220 376..584 175 26.3 Plus
Had1-PA 315 CG9914-PA 8..220 376..584 175 26.3 Plus
CG5844-PA 378 CG5844-PA 47..291 50..309 171 26.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:13:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17575-PA 791 GI17575-PA 2..791 3..783 3678 89 Plus
Dmoj\GI21154-PA 301 GI21154-PA 49..220 58..233 247 35.6 Plus
Dmoj\GI20973-PA 293 GI20973-PA 50..216 60..233 230 35.2 Plus
Dmoj\GI10748-PA 324 GI10748-PA 61..218 73..233 182 34 Plus
Dmoj\GI10483-PA 386 GI10483-PA 56..291 59..309 175 27.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:13:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19219-PA 787 GL19219-PA 1..787 1..783 3798 92.5 Plus
Dper\GL16995-PA 296 GL16995-PA 89..219 98..233 214 35.5 Plus
Dper\GL11030-PA 191 GL11030-PA 2..110 123..233 194 39.6 Plus
Dper\GL13773-PA 302 GL13773-PA 37..196 71..233 181 35.4 Plus
Dper\GL11451-PA 318 GL11451-PA 6..214 373..578 180 27.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:13:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18151-PA 787 GA18151-PA 1..787 1..783 3796 92.4 Plus
Dpse\GA21314-PA 298 GA21314-PA 3..218 19..234 267 34.1 Plus
Dpse\GA19673-PB 296 GA19673-PB 53..219 60..233 236 34.1 Plus
Dpse\GA19673-PA 296 GA19673-PA 53..219 60..233 236 34.1 Plus
Dpse\GA19005-PB 325 GA19005-PB 60..219 71..233 183 35.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:13:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12408-PA 783 GM12408-PA 1..783 1..783 4088 99.5 Plus
Dsec\GM20345-PA 233 GM20345-PA 3..152 81..233 235 38.9 Plus
Dsec\GM20252-PA 294 GM20252-PA 51..253 60..261 235 33.5 Plus
Dsec\GM16334-PA 326 GM16334-PA 63..220 73..233 191 34 Plus
Dsec\GM21560-PA 315 GM21560-PA 4..211 374..578 168 26.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:13:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22351-PA 783 GD22351-PA 1..783 1..783 4088 99.5 Plus
Dsim\GD25824-PA 299 GD25824-PA 47..218 58..233 259 38.1 Plus
Dsim\GD25738-PA 294 GD25738-PA 51..253 60..261 235 33.5 Plus
Dsim\GD18069-PA 318 GD18069-PA 55..212 73..233 190 34 Plus
Dsim\GD11066-PA 315 GD11066-PA 4..211 374..578 164 26.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:13:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17917-PA 788 GJ17917-PA 1..788 1..783 3778 91.3 Plus
Dvir\GJ21004-PA 281 GJ21004-PA 30..201 59..234 242 33 Plus
Dvir\GJ20693-PA 293 GJ20693-PA 50..252 60..261 233 31.6 Plus
Dvir\GJ23164-PA 385 GJ23164-PA 41..291 42..309 179 27.9 Plus
Dvir\GJ10690-PA 332 GJ10690-PA 68..225 73..233 176 34.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:13:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23812-PA 796 GK23812-PA 1..796 1..783 3643 89.4 Plus
Dwil\GK15915-PA 302 GK15915-PA 51..221 59..233 247 34.9 Plus
Dwil\GK17937-PA 295 GK17937-PA 52..218 60..233 232 34.1 Plus
Dwil\GK14405-PA 390 GK14405-PA 58..293 59..309 201 30.9 Plus
Dwil\GK25055-PA 316 GK25055-PA 9..221 376..584 179 26.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:13:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10479-PA 783 GE10479-PA 1..783 1..783 4037 98 Plus
Dyak\GE13432-PA 299 GE13432-PA 47..219 58..234 260 37.3 Plus
Dyak\GE13337-PA 294 GE13337-PA 51..253 60..261 238 33.5 Plus
Dyak\GE10552-PA 310 GE10552-PA 47..204 73..233 195 34.6 Plus
Dyak\GE11007-PA 315 GE11007-PA 8..220 376..584 162 25.9 Plus

GH12558.hyp Sequence

Translation from 141 to 2492

> GH12558.hyp
MSATRFLSAVGQISRQQLLQNKCTRALPISAQLLQRRRLMSTNPAPVANK
HLHTKVVNGVLVIKIDSPNAKVNSLGSEVSDEFERVIKDLETNPAVNSAV
LISGKPGCFVAGADIGMLEACQTAEEATLISHGAQVMFDRMERSKKPIVA
AISGVCLGGGLELALACHYRIATKDSKTKLGLPEVMLGLLPGGGGTVRLP
KLTSVPTALDMELTGKQVRADRAKRLGIVDLLVDPLGPGLQPAEQNTIEY
LEKTAVQVANDLASGKLRVNREKSGLVSKIQSFVMDTDFVKNKIFDTARK
QVLKASNGLYPAPLKILDVIRAGVDKGTDAGYEAERKGFGELSATPESKG
LIALFRGQTECKKNRFGKPERPVKTVGVLGAGLMGAGIVQVSVDKGYQVV
MKDATEAGLARGIGQVQKGLETAVKRKRISALERDQTLASLRPTLDYSDF
KNADIIIEAVFEDIKVKHRVIKELEAVVPEHCVIATNTSAIPITKIAAGS
SRPEKVVGMHYFSPVDKMQLLEIITHPGTSKDTIAQAVAVGLKQGKVVIT
VGDGPGFYTTRILSTMLSEAIRLLQEGVDPKDLDQYTKKFGFPVGAATLA
DEVGIDVGSHIAVDLAKAFGERFSGGNLEVMNDLVLAGFLGRKSGKGIFL
YDGQKRGTRPVNNDALEIVKQKYALVSKGANAPEDLTLRMVSRFINEAVL
CLEEKILDSPLEGDVGAVFGLGFPPFSGGPFRWVDQYGAGKLVSKMQSYA
ELYGAPFKPAQTLLDMAKDPSKKFYPKTGSSKL*

GH12558.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:33:01
Subject Length Description Subject Range Query Range Score Percent Strand
Mtpalpha-PA 783 CG4389-PA 1..783 1..783 3942 100 Plus
Mtpalpha-PB 744 CG4389-PB 1..744 40..783 3756 100 Plus
CG8778-PA 299 CG8778-PA 48..218 59..233 271 38.3 Plus
CG6543-PA 295 CG6543-PA 54..252 62..259 235 33.6 Plus
CG6543-PB 295 CG6543-PB 54..252 62..259 235 33.6 Plus