BDGP Sequence Production Resources |
Search the DGRC for GH12636
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 126 |
Well: | 36 |
Vector: | pOT2 |
Associated Gene/Transcript | Dat-RA |
Protein status: | GH12636.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1271 |
Gene | Date | Evidence |
---|---|---|
CG3318 | 2002-05-17 | Blastp of sequenced clone |
CG3318 | 2003-01-01 | Sim4 clustering to Release 3 |
Dat | 2008-04-29 | Release 5.5 accounting |
Dat | 2008-08-15 | Release 5.9 accounting |
Dat | 2008-12-18 | 5.12 accounting |
1271 bp (1271 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118780
> GH12636.complete CCATTAAAAAATAACACGAAAACGTTGGTCCCAAATCGCGAGAAGAATTC CACCTCCCTAGCATTCGAGTACATATAAGATTCTCAAGCCTGCAAAAGCT GGGCATCATCATTTCAAAAACGTGCTAACGGTTCACTTGGTCGGTCGAAT CGGAACGAATCGGGCGAAAGTCTCCAACACAAATTCCGAAATTTAACGCT TCGTGGTATCCAAATCGAAGGAGGCGGCGCATTAGGCCCACTTATTAGCC AATTTCACGCCTGAACGACTTGTATCCGATCGCCCGGCTGACACAGAAAA TGGAGGACGCATTGACCGTCTCTGGGAAGCCAGCCGCATGCCCCGTCGAC CAGGACTGCCCCTACACCATCGAACTGATCCAGCCGGAGGATGGGGAGGC GGTGATAGCCATGCTCAAGACCTTTTTCTTCAAGGATGAACCGCTGAACA CCTTCCTCGACCTTGGCGAGTGCAAGGAGCTGGAGAAGTACTCCCTGAAA CCGCTACCCGACAACTGCTCCTACAAGGCGGTCAACAAGAAGGGCGAGAT TATCGGTGTGTTCCTAAATGGACTTATGAGGCGTCCGTCCCCCGATGATG TGCCCGAAAAGGCGGCCGACTCCTGTGAACATCCCAAATTCAAGAAGATC CTCTCGCTGATGGACCACGTGGAGGAGCAGTTCAACATCTTCGACGTGTA TCCCGACGAGGAGCTCATCCTGGACGGCAAGATCCTGTCGGTGGACACCA ACTACCGGGGCCTGGGCATCGCAGGCCGCCTGACGGAGAGGGCGTACGAG TACATGCGGGAGAACGGCATCAATGTGTACCACGTGCTCTGCTCCAGCCA CTACTCCGCCCGGGTGATGGAGAAGCTGGGCTTCCACGAGGTGTTCCGCA TGCAGTTCGCCGACTACAAGCCTCAGGGAGAGGTGGTCTTCAAGCCGGCG GCCCCGCACGTGGGCATACAGGTGATGGCCAAGGAAGTGGGTCCCGCGAA GGCGGCGCAGACCAAGCTGTAGACGATCTGAGTTCGGATTTTGTACTATC GTATGTGATTCTTTAGTTTGTAGTTCGGTGGCGGGTTCCCAGTAGTGTAT CAACGTTCGATTCAGCGTAGTGTAAACAAACAGTACAAGTTACGTATTTA TCTAATTTAATCTTCCCGTCGCGACGGTAAACTTAAGTGTTTTGTGTTTA GAACGAGCTCAAAATAAAACCTTGTCTTAATAACATAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 20043119..20043768 | 587..1236 | 3250 | 100 | Plus |
chr2R | 21145070 | chr2R | 20025589..20025848 | 1..260 | 1285 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 20041810..20041984 | 261..435 | 875 | 100 | Plus |
chr2R | 21145070 | chr2R | 20042901..20043055 | 433..587 | 775 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24157113..24157764 | 587..1238 | 3260 | 100 | Plus |
2R | 25286936 | 2R | 24139602..24139861 | 1..260 | 1300 | 100 | Plus |
2R | 25286936 | 2R | 24155804..24155978 | 261..435 | 875 | 100 | Plus |
2R | 25286936 | 2R | 24156895..24157049 | 433..587 | 775 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24158312..24158963 | 587..1238 | 3260 | 100 | Plus |
2R | 25260384 | 2R | 24140801..24141060 | 1..260 | 1300 | 100 | Plus |
2R | 25260384 | 2R | 24157003..24157177 | 261..435 | 875 | 100 | Plus |
2R | 25260384 | 2R | 24158094..24158248 | 433..587 | 775 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20042903..20043055 | 435..587 | 100 | -> | Plus |
chr2R | 20025589..20025848 | 1..260 | 99 | -> | Plus |
chr2R | 20041810..20041983 | 261..434 | 100 | -> | Plus |
chr2R | 20043120..20043768 | 588..1236 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dat-RB | 67..828 | 261..1022 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dat-RB | 67..828 | 261..1022 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dat-RB | 67..828 | 261..1022 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dat-RB | 67..828 | 261..1022 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dat-RB | 67..828 | 261..1022 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dat-RA | 18..1253 | 1..1236 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dat-RA | 18..1253 | 1..1236 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dat-RA | 40..1275 | 1..1236 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dat-RA | 18..1253 | 1..1236 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Dat-RA | 40..1275 | 1..1236 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24156897..24157049 | 435..587 | 100 | -> | Plus |
2R | 24139602..24139861 | 1..260 | 100 | -> | Plus |
2R | 24155804..24155977 | 261..434 | 100 | -> | Plus |
2R | 24157114..24157762 | 588..1236 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24156897..24157049 | 435..587 | 100 | -> | Plus |
2R | 24139602..24139861 | 1..260 | 100 | -> | Plus |
2R | 24155804..24155977 | 261..434 | 100 | -> | Plus |
2R | 24157114..24157762 | 588..1236 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24156897..24157049 | 435..587 | 100 | -> | Plus |
2R | 24139602..24139861 | 1..260 | 100 | -> | Plus |
2R | 24155804..24155977 | 261..434 | 100 | -> | Plus |
2R | 24157114..24157762 | 588..1236 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20043327..20043500 | 261..434 | 100 | -> | Plus |
arm_2R | 20044420..20044572 | 435..587 | 100 | -> | Plus |
arm_2R | 20027125..20027384 | 1..260 | 100 | -> | Plus |
arm_2R | 20044637..20045285 | 588..1236 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24140819..24141078 | 1..260 | 100 | -> | Plus |
2R | 24157021..24157194 | 261..434 | 100 | -> | Plus |
2R | 24158114..24158266 | 435..587 | 100 | -> | Plus |
2R | 24158331..24158979 | 588..1236 | 100 | Plus |
Translation from 299 to 1021
> GH12636.pep MEDALTVSGKPAACPVDQDCPYTIELIQPEDGEAVIAMLKTFFFKDEPLN TFLDLGECKELEKYSLKPLPDNCSYKAVNKKGEIIGVFLNGLMRRPSPDD VPEKAADSCEHPKFKKILSLMDHVEEQFNIFDVYPDEELILDGKILSVDT NYRGLGIAGRLTERAYEYMRENGINVYHVLCSSHYSARVMEKLGFHEVFR MQFADYKPQGEVVFKPAAPHVGIQVMAKEVGPAKAAQTKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11376-PA | 275 | GF11376-PA | 41..275 | 1..240 | 1057 | 82.2 | Plus |
Dana\GF22216-PA | 229 | GF22216-PA | 4..218 | 25..230 | 257 | 32.6 | Plus |
Dana\GF24634-PA | 222 | GF24634-PA | 10..218 | 23..226 | 203 | 29.9 | Plus |
Dana\GF21065-PA | 215 | GF21065-PA | 9..210 | 27..225 | 185 | 28.4 | Plus |
Dana\GF20033-PA | 209 | GF20033-PA | 13..205 | 39..226 | 171 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22946-PA | 275 | GG22946-PA | 36..275 | 1..240 | 1258 | 97.9 | Plus |
Dere\GG12937-PA | 231 | GG12937-PA | 4..219 | 25..230 | 239 | 30 | Plus |
Dere\GG21595-PA | 222 | GG21595-PA | 10..218 | 23..226 | 215 | 31.2 | Plus |
Dere\GG21596-PA | 222 | GG21596-PA | 10..219 | 23..227 | 210 | 29.9 | Plus |
Dere\GG10399-PA | 216 | GG10399-PA | 5..213 | 23..227 | 185 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19975-PA | 277 | GH19975-PA | 54..272 | 17..234 | 938 | 76.7 | Plus |
Dgri\GH11973-PA | 226 | GH11973-PA | 4..218 | 25..230 | 232 | 34.2 | Plus |
Dgri\GH10999-PA | 223 | GH10999-PA | 13..219 | 24..226 | 221 | 32.5 | Plus |
Dgri\GH12774-PA | 217 | GH12774-PA | 18..214 | 30..227 | 165 | 27.9 | Plus |
Dgri\GH11001-PA | 214 | GH11001-PA | 8..211 | 27..227 | 152 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
AANAT1-PA | 240 | CG3318-PA | 1..240 | 1..240 | 1266 | 100 | Plus |
AANAT1-PB | 275 | CG3318-PB | 36..275 | 1..240 | 1266 | 100 | Plus |
AANATL7-PD | 228 | CG13759-PD | 4..216 | 25..230 | 234 | 29.5 | Plus |
AANATL7-PC | 228 | CG13759-PC | 4..216 | 25..230 | 234 | 29.5 | Plus |
AANATL7-PB | 228 | CG13759-PB | 4..216 | 25..230 | 234 | 29.5 | Plus |
AANATL7-PA | 228 | CG13759-PA | 4..216 | 25..230 | 234 | 29.5 | Plus |
AANATL3-PA | 222 | CG10659-PA | 10..218 | 23..226 | 208 | 29.6 | Plus |
AANATL4-PA | 224 | CG18607-PA | 10..221 | 23..227 | 186 | 28.7 | Plus |
AANATL2-PB | 216 | CG9486-PB | 5..213 | 23..227 | 175 | 30.6 | Plus |
AANATL2-PA | 216 | CG9486-PA | 5..213 | 23..227 | 175 | 30.6 | Plus |
AANATL5-PA | 222 | CG10476-PA | 3..222 | 16..230 | 153 | 24.8 | Plus |
AgmNAT-PA | 216 | CG15766-PA | 2..210 | 13..224 | 151 | 24.8 | Plus |
AANATL6-PB | 222 | CG18606-PB | 3..222 | 16..230 | 148 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20262-PA | 264 | GI20262-PA | 34..263 | 3..236 | 935 | 71.4 | Plus |
Dmoj\GI14714-PA | 223 | GI14714-PA | 4..218 | 25..230 | 271 | 34.6 | Plus |
Dmoj\GI17517-PA | 224 | GI17517-PA | 13..220 | 24..226 | 212 | 30.5 | Plus |
Dmoj\GI11371-PA | 222 | GI11371-PA | 13..218 | 24..226 | 206 | 29.4 | Plus |
Dmoj\GI17524-PA | 222 | GI17524-PA | 35..219 | 46..227 | 203 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17369-PA | 290 | GL17369-PA | 38..290 | 1..240 | 1059 | 80.2 | Plus |
Dper\GL14179-PA | 229 | GL14179-PA | 4..220 | 25..231 | 245 | 34.5 | Plus |
Dper\GL11101-PA | 224 | GL11101-PA | 12..220 | 23..226 | 212 | 30.4 | Plus |
Dper\GL15167-PA | 215 | GL15167-PA | 9..205 | 24..220 | 197 | 28.4 | Plus |
Dper\GL25512-PA | 221 | GL25512-PA | 7..218 | 23..227 | 169 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17346-PA | 290 | GA17346-PA | 38..290 | 1..240 | 1059 | 80.2 | Plus |
Dpse\GA12509-PA | 229 | GA12509-PA | 4..220 | 25..231 | 245 | 34.5 | Plus |
Dpse\GA24612-PA | 224 | GA24612-PA | 12..220 | 23..226 | 216 | 30.4 | Plus |
Dpse\GA28106-PA | 219 | GA28106-PA | 10..215 | 23..226 | 202 | 31.5 | Plus |
Dpse\GA13941-PA | 215 | GA13941-PA | 9..205 | 24..220 | 197 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\Dat-PA | 235 | GM18311-PA | 36..235 | 1..240 | 856 | 72.2 | Plus |
Dsec\GM19229-PA | 228 | GM19229-PA | 4..216 | 25..230 | 243 | 31.7 | Plus |
Dsec\GM21944-PA | 224 | GM21944-PA | 10..221 | 23..227 | 215 | 30.7 | Plus |
Dsec\GM18616-PA | 216 | GM18616-PA | 5..213 | 23..227 | 168 | 30.9 | Plus |
Dsec\GM12613-PA | 216 | GM12613-PA | 4..211 | 21..225 | 162 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Dat-PA | 241 | GD15464-PA | 36..237 | 1..202 | 1039 | 94.6 | Plus |
Dsim\GD16609-PA | 272 | GD16609-PA | 48..260 | 25..230 | 243 | 31.7 | Plus |
Dsim\GD21720-PA | 222 | GD21720-PA | 10..218 | 23..226 | 211 | 30.5 | Plus |
Dsim\GD11441-PA | 224 | GD11441-PA | 10..221 | 23..227 | 203 | 28.9 | Plus |
Dsim\GD23397-PA | 216 | GD23397-PA | 5..213 | 23..227 | 171 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20215-PA | 275 | GJ20215-PA | 39..270 | 3..234 | 935 | 72.8 | Plus |
Dvir\GJ16779-PA | 232 | GJ16779-PA | 4..218 | 25..230 | 260 | 33.6 | Plus |
Dvir\GJ18418-PA | 224 | GJ18418-PA | 5..220 | 16..226 | 243 | 32.6 | Plus |
Dvir\GJ15312-PA | 224 | GJ15312-PA | 5..220 | 16..226 | 240 | 32.6 | Plus |
Dvir\GJ15301-PA | 221 | GJ15301-PA | 13..217 | 24..226 | 227 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23036-PA | 273 | GK23036-PA | 36..272 | 1..234 | 993 | 78.5 | Plus |
Dwil\GK10244-PA | 231 | GK10244-PA | 4..215 | 25..230 | 234 | 31.9 | Plus |
Dwil\GK15377-PA | 223 | GK15377-PA | 10..220 | 23..227 | 210 | 31 | Plus |
Dwil\GK15374-PA | 209 | GK15374-PA | 1..205 | 27..226 | 209 | 30.6 | Plus |
Dwil\GK15375-PA | 223 | GK15375-PA | 10..220 | 23..227 | 206 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14383-PA | 275 | GE14383-PA | 36..275 | 1..240 | 1224 | 95.4 | Plus |
Dyak\GE16262-PA | 231 | GE16262-PA | 4..218 | 25..230 | 244 | 30.9 | Plus |
Dyak\GE12614-PA | 222 | GE12614-PA | 10..219 | 23..227 | 227 | 31 | Plus |
Dyak\GE12035-PA | 219 | GE12035-PA | 5..216 | 23..227 | 181 | 28.4 | Plus |
Dyak\GE13747-PA | 216 | GE13747-PA | 5..213 | 23..227 | 167 | 30.1 | Plus |
Translation from 299 to 1021
> GH12636.hyp MEDALTVSGKPAACPVDQDCPYTIELIQPEDGEAVIAMLKTFFFKDEPLN TFLDLGECKELEKYSLKPLPDNCSYKAVNKKGEIIGVFLNGLMRRPSPDD VPEKAADSCEHPKFKKILSLMDHVEEQFNIFDVYPDEELILDGKILSVDT NYRGLGIAGRLTERAYEYMRENGINVYHVLCSSHYSARVMEKLGFHEVFR MQFADYKPQGEVVFKPAAPHVGIQVMAKEVGPAKAAQTKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dat-PA | 240 | CG3318-PA | 1..240 | 1..240 | 1266 | 100 | Plus |
Dat-PB | 275 | CG3318-PB | 36..275 | 1..240 | 1266 | 100 | Plus |
CG13759-PD | 228 | CG13759-PD | 4..216 | 25..230 | 234 | 29.5 | Plus |
CG13759-PC | 228 | CG13759-PC | 4..216 | 25..230 | 234 | 29.5 | Plus |
CG13759-PB | 228 | CG13759-PB | 4..216 | 25..230 | 234 | 29.5 | Plus |