BDGP Sequence Production Resources |
Search the DGRC for GH12641
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 126 |
Well: | 41 |
Vector: | pOT2 |
Associated Gene/Transcript | Gyk-RA |
Protein status: | GH12641.pep: gold |
Preliminary Size: | 1885 |
Sequenced Size: | 1801 |
Gene | Date | Evidence |
---|---|---|
CG18374 | 2001-01-01 | Release 2 assignment |
CG18374 | 2001-07-04 | Blastp of sequenced clone |
CG18374 | 2003-01-01 | Sim4 clustering to Release 3 |
Gyk | 2008-04-29 | Release 5.5 accounting |
Gyk | 2008-08-15 | Release 5.9 accounting |
Gyk | 2008-12-18 | 5.12 accounting |
1801 bp (1801 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051456
> GH12641.complete AAAGCGTGCTGGCATTTATTGACTGTAAAGGTGAACTCTGGACACCACGT AAAAAAAATGGATTCTCCCACAACCGAAACGACACCGCCTCCACCCACGC TATCTGGTCCATTCGTTGGGGCTATTGACGAGGGAACCACTTCCGCGCGA TTTATTATATTTCGTGCGGGCACTGACGAAATTGTGTGCTTTCATCAGAT TGAAGTGGAGTCTATTTTCCAGAAGGAGGGATGGTGCGAGCAGGATCCCA TGGCCATAGTGAATACGGTCAACGAGTGCATCACCGGTGCCTGCAAGAAA CTTGTGGCCGTGGGCGGGAAGGTTGAGGAAATAATCACGATTGGAATAAC AAACCAACGCGAGTCCACAGTCGTATGGGATAGAAACTCCGGCCAACCGC TGGTGAACGCTATCATCTGGCTAGACAATCGTACCACCAGCACGGTGGAG GAGCTTTTGGAGACTATTCCGAACAATGCCAGGAACATCAACTACCTGCG CCCATTGTGCGGACTTCCTCTGTCTCCGTACTTTTCGGGCGTGAAACTAC GCTGGCTTCGAGACAACGTGCCGGTTGTCAGCCAGGCTATGGAGAAGGGC ACGGCCATGTTTGGCACCATCGACACCTGGCTAATGTATAATCTTACGGG CGGGAAGGACTGTGGTGTCCACAAGACGGATGTGACCAACGCTTCGCGCA CTATGCTCATGAACATCGAGACCCTTCAGTGGGATGCCAACTTGCTAAAG TTCTTTGGGCTGCCCAAGACCATTTTGCCGGAGATCTGCTCGAGCTCAGA GTTCTATGGCAGCATTGCGCAGGGCGTTCTGCAAGGCATAGGCATAACAT CGGTTCTGGGCGACCAGCAAGCCGCTCTAGTGGGTCAACAATGCCTGGCC AAAGGTCAGGCCAAAGCCACTTATGGCACTGGATGTTTTCTGCTTTATAA CACAGGACCTTCAATTGTACACTCAACGCACGGATTACTAACGACTGTTG GCTACCAACTAGGACGGAAGGCAGTCCCATTTTACGCCCTTGAGGGAAGC GTGTCCATTGCCGGTGCAGCATTCAACTGGCTGCGCGACAACATGAACCT TATTCAAAACTCGGGGCAGATCGAAACCATGGCTAGCACTGTGGACAACT CTCTTGACGTATACTTCGTACCAGCTTTCAATGGACTCTACGCCCCCTAC TGGAATCAGGACGCTCGCGGTGTCATTTGTGGACTGAGTGAAGAAACAAC AAGTGAGCACATAGTAAGAGCCACCCTGGAAGCAGTTTGTTTCCAGGTCC GTGATATTCTCGATTCGATGCACAAGGACTGCAAGATTCCACTGGCCAAG CTTATGGTAGACGGGGGCATGACTGTGAATAATCTGTTCCTGCAGCTTCA ATCCGACCTAGTAGGAATTCAAGTACTCCGGGCGAAGATCGCAGAGACAA CAGCGCTGGGAGCTGCAATGGCAGCCTACAAAGCCGTTGAAAACCGATAC CAAATGGAGGCTCCACTCTCTAAATCTGGCCCCCGAGAAGCCATAAAGCC ATCGATCAGTGCCACCGATCGCAACCTGCGCTACCAAAAGTGGAAAATGG CTATCGATCGTTCACTGAACTGGGAGACTTCGACGCTTCCACAGGGCGAA CGGGAGGCCTTTGACGGAGCGTGATCACAGCTAATGTCTGGTAACGTTCA TGTTCTTCTATTCGTAAATCAATTGCTTGGTTTTTCGTATTCGAAATTTC CATTTATTACATATACATATAAAAATGTTAATTAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gyk-RA | 1938 | Gyk-RA | 145..1932 | 1..1788 | 8940 | 100 | Plus |
Gyk.a | 2110 | Gyk.a | 317..2104 | 1..1788 | 8940 | 100 | Plus |
Gyk-RB | 1746 | Gyk-RB | 173..1740 | 221..1788 | 7840 | 100 | Plus |
Gyk-RB | 1746 | Gyk-RB | 145..174 | 1..30 | 150 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 202443..203576 | 1459..326 | 5670 | 100 | Minus |
chr3L | 24539361 | chr3L | 205322..205649 | 328..1 | 1640 | 100 | Minus |
chr3L | 24539361 | chr3L | 202060..202385 | 1783..1458 | 1630 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 202060..202384 | 1459..1783 | 100 | <- | Minus |
chr3L | 202444..203574 | 328..1458 | 100 | <- | Minus |
chr3L | 205323..205649 | 1..327 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gyk-RA | 1..1617 | 58..1674 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gyk-RA | 1..1617 | 58..1674 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gyk-RA | 1..1617 | 58..1674 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gyk-RA | 1..1617 | 58..1674 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gyk-RA | 1..1617 | 58..1674 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gyk-RA | 126..1908 | 1..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gyk-RA | 151..1933 | 1..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gyk-RA | 151..1933 | 1..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gyk-RA | 126..1908 | 1..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gyk-RA | 151..1933 | 1..1783 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 202105..202429 | 1459..1783 | 100 | <- | Minus |
3L | 202489..203619 | 328..1458 | 100 | <- | Minus |
3L | 205368..205694 | 1..327 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 202105..202429 | 1459..1783 | 100 | <- | Minus |
3L | 202489..203619 | 328..1458 | 100 | <- | Minus |
3L | 205368..205694 | 1..327 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 202105..202429 | 1459..1783 | 100 | <- | Minus |
3L | 202489..203619 | 328..1458 | 100 | <- | Minus |
3L | 205368..205694 | 1..327 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 202105..202429 | 1459..1783 | 100 | <- | Minus |
arm_3L | 202489..203619 | 328..1458 | 100 | <- | Minus |
arm_3L | 205368..205694 | 1..327 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 202105..202429 | 1459..1783 | 100 | <- | Minus |
3L | 202489..203619 | 328..1458 | 100 | <- | Minus |
3L | 205368..205694 | 1..327 | 100 | Minus |
Translation from 1 to 1673
> GH12641.hyp KACWHLLTVKVNSGHHVKKMDSPTTETTPPPPTLSGPFVGAIDEGTTSAR FIIFRAGTDEIVCFHQIEVESIFQKEGWCEQDPMAIVNTVNECITGACKK LVAVGGKVEEIITIGITNQRESTVVWDRNSGQPLVNAIIWLDNRTTSTVE ELLETIPNNARNINYLRPLCGLPLSPYFSGVKLRWLRDNVPVVSQAMEKG TAMFGTIDTWLMYNLTGGKDCGVHKTDVTNASRTMLMNIETLQWDANLLK FFGLPKTILPEICSSSEFYGSIAQGVLQGIGITSVLGDQQAALVGQQCLA KGQAKATYGTGCFLLYNTGPSIVHSTHGLLTTVGYQLGRKAVPFYALEGS VSIAGAAFNWLRDNMNLIQNSGQIETMASTVDNSLDVYFVPAFNGLYAPY WNQDARGVICGLSEETTSEHIVRATLEAVCFQVRDILDSMHKDCKIPLAK LMVDGGMTVNNLFLQLQSDLVGIQVLRAKIAETTALGAAMAAYKAVENRY QMEAPLSKSGPREAIKPSISATDRNLRYQKWKMAIDRSLNWETSTLPQGE REAFDGA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gyk-PA | 538 | CG18374-PA | 1..538 | 20..557 | 2807 | 100 | Plus |
Gyk-PB | 474 | CG18374-PB | 1..474 | 84..557 | 2459 | 100 | Plus |
Gk-PF | 576 | CG7995-PF | 33..533 | 39..541 | 1212 | 46.3 | Plus |
Gk-PA | 576 | CG7995-PA | 33..533 | 39..541 | 1212 | 46.3 | Plus |
Gk-PB | 576 | CG7995-PB | 33..533 | 39..541 | 1212 | 46.3 | Plus |
Translation from 57 to 1673
> GH12641.pep MDSPTTETTPPPPTLSGPFVGAIDEGTTSARFIIFRAGTDEIVCFHQIEV ESIFQKEGWCEQDPMAIVNTVNECITGACKKLVAVGGKVEEIITIGITNQ RESTVVWDRNSGQPLVNAIIWLDNRTTSTVEELLETIPNNARNINYLRPL CGLPLSPYFSGVKLRWLRDNVPVVSQAMEKGTAMFGTIDTWLMYNLTGGK DCGVHKTDVTNASRTMLMNIETLQWDANLLKFFGLPKTILPEICSSSEFY GSIAQGVLQGIGITSVLGDQQAALVGQQCLAKGQAKATYGTGCFLLYNTG PSIVHSTHGLLTTVGYQLGRKAVPFYALEGSVSIAGAAFNWLRDNMNLIQ NSGQIETMASTVDNSLDVYFVPAFNGLYAPYWNQDARGVICGLSEETTSE HIVRATLEAVCFQVRDILDSMHKDCKIPLAKLMVDGGMTVNNLFLQLQSD LVGIQVLRAKIAETTALGAAMAAYKAVENRYQMEAPLSKSGPREAIKPSI SATDRNLRYQKWKMAIDRSLNWETSTLPQGEREAFDGA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10570-PA | 540 | GF10570-PA | 8..540 | 2..538 | 2601 | 89.2 | Plus |
Dana\GF24829-PA | 576 | GF24829-PA | 32..533 | 19..522 | 1234 | 46.2 | Plus |
Dana\GF24830-PA | 552 | GF24830-PA | 1..504 | 15..522 | 1171 | 44.6 | Plus |
Dana\GF12283-PA | 596 | GF12283-PA | 10..556 | 17..535 | 1007 | 37.5 | Plus |
Dana\GF24265-PA | 558 | GF24265-PA | 26..557 | 2..522 | 487 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14680-PA | 538 | GG14680-PA | 1..538 | 1..538 | 2867 | 98.7 | Plus |
Dere\GG14819-PA | 576 | GG14819-PA | 32..533 | 19..522 | 1237 | 46.2 | Plus |
Dere\GG20235-PA | 596 | GG20235-PA | 10..556 | 17..535 | 989 | 37 | Plus |
Dere\GG14901-PA | 534 | GG14901-PA | 20..533 | 16..522 | 432 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15662-PA | 536 | GH15662-PA | 1..536 | 1..538 | 2446 | 83.8 | Plus |
Dgri\GH15761-PA | 573 | GH15761-PA | 32..533 | 19..522 | 1242 | 46.8 | Plus |
Dgri\GH20851-PA | 596 | GH20851-PA | 10..556 | 17..535 | 970 | 37.1 | Plus |
Dgri\GH14570-PA | 513 | GH14570-PA | 2..512 | 27..522 | 448 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gk1-PA | 538 | CG18374-PA | 1..538 | 1..538 | 2807 | 100 | Plus |
Gk1-PB | 474 | CG18374-PB | 1..474 | 65..538 | 2459 | 100 | Plus |
Gk2-PF | 576 | CG7995-PF | 33..533 | 20..522 | 1212 | 46.3 | Plus |
Gk2-PA | 576 | CG7995-PA | 33..533 | 20..522 | 1212 | 46.3 | Plus |
Gk2-PB | 576 | CG7995-PB | 33..533 | 20..522 | 1212 | 46.3 | Plus |
Gk2-PD | 576 | CG7995-PD | 33..533 | 20..522 | 1212 | 46.3 | Plus |
Gk2-PE | 576 | CG7995-PE | 33..533 | 20..522 | 1212 | 46.3 | Plus |
Gk2-PC | 576 | CG7995-PC | 33..533 | 20..522 | 1212 | 46.3 | Plus |
CG8298-PC | 596 | CG8298-PC | 10..556 | 17..535 | 971 | 36.8 | Plus |
CG8298-PA | 596 | CG8298-PA | 10..556 | 17..535 | 971 | 36.8 | Plus |
CG1271-PD | 539 | CG1271-PD | 17..538 | 2..522 | 421 | 27.5 | Plus |
CG1271-PA | 556 | CG1271-PA | 17..555 | 2..522 | 420 | 27.8 | Plus |
CG1271-PB | 406 | CG1271-PB | 44..405 | 174..522 | 352 | 29.2 | Plus |
CG1271-PC | 384 | CG1271-PC | 44..336 | 174..454 | 289 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12707-PA | 535 | GI12707-PA | 12..534 | 15..537 | 2454 | 85.3 | Plus |
Dmoj\GI12540-PA | 577 | GI12540-PA | 32..533 | 19..522 | 1259 | 47.2 | Plus |
Dmoj\GI20956-PA | 596 | GI20956-PA | 10..556 | 17..535 | 994 | 37.8 | Plus |
Dmoj\GI13897-PA | 515 | GI13897-PA | 8..514 | 20..522 | 442 | 27.3 | Plus |
Dmoj\GI14566-PA | 149 | GI14566-PA | 1..105 | 421..522 | 195 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16108-PA | 474 | GL16108-PA | 1..474 | 65..538 | 2334 | 90.3 | Plus |
Dper\GL20743-PA | 576 | GL20743-PA | 32..533 | 19..522 | 1228 | 46.2 | Plus |
Dper\GL10517-PA | 596 | GL10517-PA | 10..556 | 17..535 | 984 | 37 | Plus |
Dper\GL20781-PA | 531 | GL20781-PA | 26..530 | 23..522 | 424 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14911-PA | 532 | GA14911-PA | 3..532 | 9..538 | 2597 | 89.6 | Plus |
Dpse\GA20751-PA | 576 | GA20751-PA | 32..533 | 19..522 | 1229 | 46.2 | Plus |
Dpse\GA20966-PA | 596 | GA20966-PA | 10..556 | 17..535 | 984 | 36.8 | Plus |
Dpse\GA11767-PA | 531 | GA11767-PA | 22..530 | 19..522 | 434 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14296-PA | 538 | GM14296-PA | 1..538 | 1..538 | 2887 | 99.6 | Plus |
Dsec\GM14440-PA | 576 | GM14440-PA | 32..533 | 19..522 | 1234 | 46.2 | Plus |
Dsec\GM21324-PA | 596 | GM21324-PA | 10..556 | 17..535 | 972 | 35.9 | Plus |
Dsec\GM14527-PA | 537 | GM14527-PA | 16..536 | 2..522 | 423 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13534-PA | 538 | GD13534-PA | 1..538 | 1..538 | 2887 | 99.6 | Plus |
Dsim\GD13642-PA | 553 | GD13642-PA | 32..510 | 19..522 | 1120 | 42.8 | Plus |
Dsim\GD10831-PA | 596 | GD10831-PA | 10..556 | 17..535 | 981 | 36.3 | Plus |
Dsim\GD13724-PA | 538 | GD13724-PA | 17..537 | 2..522 | 421 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12691-PA | 524 | GJ12691-PA | 1..524 | 15..538 | 2459 | 85.7 | Plus |
Dvir\GJ16056-PA | 577 | GJ16056-PA | 32..533 | 19..522 | 1255 | 46.8 | Plus |
Dvir\GJ20677-PA | 596 | GJ20677-PA | 10..556 | 17..535 | 1002 | 37.9 | Plus |
Dvir\GJ11752-PA | 515 | GJ11752-PA | 9..514 | 20..522 | 447 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16855-PA | 536 | GK16855-PA | 13..536 | 15..538 | 2447 | 85.5 | Plus |
Dwil\GK16636-PA | 576 | GK16636-PA | 32..533 | 19..522 | 1243 | 47 | Plus |
Dwil\GK19496-PA | 596 | GK19496-PA | 10..556 | 17..535 | 997 | 38 | Plus |
Dwil\GK12322-PA | 533 | GK12322-PA | 20..532 | 19..522 | 432 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21041-PA | 538 | GE21041-PA | 1..538 | 1..538 | 2854 | 98.3 | Plus |
Dyak\GE21182-PA | 576 | GE21182-PA | 32..533 | 19..522 | 1238 | 46.2 | Plus |
Dyak\GE12395-PA | 596 | GE12395-PA | 10..556 | 17..535 | 982 | 36.6 | Plus |
Dyak\GE20355-PA | 538 | GE20355-PA | 17..537 | 2..522 | 438 | 27.1 | Plus |