BDGP Sequence Production Resources |
Search the DGRC for GH12692
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 126 |
Well: | 92 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1889-RA |
Protein status: | GH12692.pep: gold |
Preliminary Size: | 1138 |
Sequenced Size: | 1215 |
Gene | Date | Evidence |
---|---|---|
CG1889 | 2001-01-01 | Release 2 assignment |
CG1889 | 2001-09-19 | Blastp of sequenced clone |
CG1889 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1889 | 2008-04-29 | Release 5.5 accounting |
CG1889 | 2008-08-15 | Release 5.9 accounting |
CG1889 | 2008-12-18 | 5.12 accounting |
1215 bp (1215 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058355
> GH12692.complete TTGATGTACACTTTGCGGCTTAGTTAGTTAGTTAGTCAGTCAGCCAGTTA GCTAGTCGGCCAGTAATCGAAAGTGCCAAAATGTCACAGATGCTGCAGCT GGATGCCTTGGTCATGGCCATGGCCTGTCTATCCACCACACAAACGGATC TGGGCGGAGGACTGTTGGTTCCGCCCTCCTTGGGAAATGCGAGTTCCAGC AGCTGTCCAGTTTCGGCTTTAAGTGGTCTTACCACTCGAATGCAATCGCT GAACAACGAAATAGCTAGTGTCAAGGAGCAGATAGGCAGTCTCCAGGAGC AGTTGGTGGATCTGCGAAGAGCGGGAAGTGCACCGGTGGTGGGACTCGCT TCGCCCAATGCACTGGCATCTCGATTCCTAGACATTGAGCCGCAACTCCT GGCCAACGGTGGTGCAGCGGCCGTTCCAATCACTCCGGCAAACTGCCTGA AACAGCAGCACGGTGTGGTGCGAATCAGACCCCGCTCGAACGTGGAACCG TTCTTTGTTTTTTGCGATCAGAAGGTCAGAAACGGTGGTTGGACAATGGT AGTTAATCGTTATGATGGCAGTGAGGATTTCAATCGAAAGTGGGCGGATT ACAAGATCGGTTTCGGGCCACTAACCACCGAGTTCTTCATCGGATTGGAT AAATTGCATCAGATTACGAGCAGTGACAACTATGAGCTTTTGGTTCAGCT GCAGAATCGAAAGCAGGAGCTGAGATATGCCCTATATGATCACTTTAGCA TCGGCAGTGAATCGGAACAGTATCGTCTGAATGTCTTGGGGGATTATCAC GGCGATGCTGCCGATGCATTGCGTGACCACACGGGAAAGAAATTCAGTAC CCACGATAGGGTTAATGATGAAAATGAGCAAAACTGCGCGGCTCAGCAGT CGGGAGCTTTTTGGTATGGCGGCTCTTGCAATCTCACCAACCCATTTGGC CTATATCAACGCCTTCTAGAACGGGATGTTGATGGTTTCAAGGGCATTCT ATGGCGCGGTTTCTTAAATGGACCCAAAGGTTCCCTGAAAATAGTTCGCA TGATGGTTCGTCCACGCGCCGCTTTATAAATAAGTAACTTTATTGACTAC ACCAGTCGCATATTAAACAAACGCCCAACAAGTTAAGAGATAAAAAAAAA CAAATGTAATACAAAAGATTAATTAAAAATTAAATTCTATTTAGAAAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 9857470..9858030 | 377..937 | 2775 | 99.6 | Plus |
chrX | 22417052 | chrX | 9858091..9858348 | 938..1194 | 1240 | 99.6 | Plus |
chrX | 22417052 | chrX | 9856903..9857093 | 1..191 | 955 | 100 | Plus |
chrX | 22417052 | chrX | 9857218..9857403 | 191..376 | 930 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 9965837..9966397 | 377..937 | 2805 | 100 | Plus |
X | 23542271 | X | 9966458..9966715 | 938..1195 | 1290 | 100 | Plus |
X | 23542271 | X | 9965270..9965460 | 1..191 | 955 | 100 | Plus |
X | 23542271 | X | 9965585..9965770 | 191..376 | 930 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 9973935..9974495 | 377..937 | 2805 | 100 | Plus |
X | 23527363 | X | 9974556..9974813 | 938..1195 | 1290 | 100 | Plus |
X | 23527363 | X | 9973368..9973558 | 1..191 | 955 | 100 | Plus |
X | 23527363 | X | 9973683..9973868 | 191..376 | 930 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\Mar | 610 | Dwil\Mar MAR 610bp Derived from AF518731. | 139..189 | 547..497 | 111 | 68.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9857219..9857403 | 192..376 | 100 | -> | Plus |
chrX | 9857470..9858030 | 377..937 | 99 | -> | Plus |
chrX | 9858091..9858348 | 938..1194 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1889-RC | 1..999 | 81..1079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1889-RC | 1..999 | 81..1079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1889-RA | 1..999 | 81..1079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1889-RC | 1..999 | 81..1079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1889-RA | 1..999 | 81..1079 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1889-RC | 30..1223 | 1..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1889-RC | 30..1223 | 1..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1889-RA | 30..1223 | 1..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1889-RC | 30..1223 | 1..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1889-RA | 30..1223 | 1..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9965270..9965460 | 1..191 | 100 | -> | Plus |
X | 9965586..9965770 | 192..376 | 100 | -> | Plus |
X | 9965837..9966397 | 377..937 | 100 | -> | Plus |
X | 9966458..9966714 | 938..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9965270..9965460 | 1..191 | 100 | -> | Plus |
X | 9965586..9965770 | 192..376 | 100 | -> | Plus |
X | 9965837..9966397 | 377..937 | 100 | -> | Plus |
X | 9966458..9966714 | 938..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9965270..9965460 | 1..191 | 100 | -> | Plus |
X | 9965586..9965770 | 192..376 | 100 | -> | Plus |
X | 9965837..9966397 | 377..937 | 100 | -> | Plus |
X | 9966458..9966714 | 938..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9860491..9860747 | 938..1194 | 100 | Plus | |
arm_X | 9859303..9859493 | 1..191 | 100 | -> | Plus |
arm_X | 9859619..9859803 | 192..376 | 100 | -> | Plus |
arm_X | 9859870..9860430 | 377..937 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9973368..9973558 | 1..191 | 100 | -> | Plus |
X | 9973684..9973868 | 192..376 | 100 | -> | Plus |
X | 9973935..9974495 | 377..937 | 100 | -> | Plus |
X | 9974556..9974812 | 938..1194 | 100 | Plus |
Translation from 80 to 1078
> GH12692.pep MSQMLQLDALVMAMACLSTTQTDLGGGLLVPPSLGNASSSSCPVSALSGL TTRMQSLNNEIASVKEQIGSLQEQLVDLRRAGSAPVVGLASPNALASRFL DIEPQLLANGGAAAVPITPANCLKQQHGVVRIRPRSNVEPFFVFCDQKVR NGGWTMVVNRYDGSEDFNRKWADYKIGFGPLTTEFFIGLDKLHQITSSDN YELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHGDAADALRDH TGKKFSTHDRVNDENEQNCAAQQSGAFWYGGSCNLTNPFGLYQRLLERDV DGFKGILWRGFLNGPKGSLKIVRMMVRPRAAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19159-PA | 338 | GF19159-PA | 1..337 | 1..331 | 1390 | 78 | Plus |
Dana\GF19143-PA | 324 | GF19143-PA | 1..321 | 5..329 | 780 | 48.7 | Plus |
Dana\GF13877-PA | 250 | GF13877-PA | 52..246 | 129..329 | 442 | 47.5 | Plus |
Dana\GF12573-PA | 434 | GF12573-PA | 128..417 | 37..330 | 402 | 33.3 | Plus |
Dana\GF12980-PA | 268 | GF12980-PA | 51..264 | 119..329 | 377 | 40.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18333-PA | 332 | GG18333-PA | 1..330 | 1..330 | 1642 | 92.1 | Plus |
Dere\GG18953-PA | 334 | GG18953-PA | 1..330 | 5..328 | 797 | 47 | Plus |
Dere\GG24402-PA | 218 | GG24402-PA | 6..211 | 119..329 | 457 | 47.9 | Plus |
Dere\GG23629-PA | 277 | GG23629-PA | 83..273 | 138..330 | 401 | 41.5 | Plus |
Dere\GG22162-PA | 291 | GG22162-PA | 57..276 | 111..331 | 397 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11810-PA | 331 | GH11810-PA | 1..329 | 1..331 | 1090 | 61.4 | Plus |
Dgri\GH12910-PA | 320 | GH12910-PA | 1..315 | 5..328 | 789 | 46.4 | Plus |
Dgri\GH22716-PA | 425 | GH22716-PA | 108..409 | 29..329 | 473 | 36.5 | Plus |
Dgri\GH23081-PA | 301 | GH23081-PA | 11..288 | 50..329 | 465 | 39.5 | Plus |
Dgri\GH22253-PA | 259 | GH22253-PA | 88..258 | 112..284 | 433 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1889-PC | 332 | CG1889-PC | 1..332 | 1..332 | 1731 | 100 | Plus |
CG1889-PA | 332 | CG1889-PA | 1..332 | 1..332 | 1731 | 100 | Plus |
CG1889-PD | 338 | CG1889-PD | 1..338 | 1..332 | 1714 | 98.2 | Plus |
CG1791-PC | 333 | CG1791-PC | 1..329 | 5..328 | 779 | 47.2 | Plus |
CG1791-PA | 334 | CG1791-PA | 1..330 | 5..328 | 773 | 47.2 | Plus |
CG1791-PB | 195 | CG1791-PB | 1..191 | 138..328 | 631 | 58.6 | Plus |
CG1889-PE | 99 | CG1889-PE | 1..98 | 1..98 | 472 | 100 | Plus |
CG8642-PB | 429 | CG8642-PB | 125..416 | 37..332 | 394 | 34.4 | Plus |
CG9500-PB | 292 | CG9500-PB | 88..287 | 127..329 | 391 | 39.9 | Plus |
CG30281-PA | 291 | CG30281-PA | 63..276 | 117..331 | 384 | 39.3 | Plus |
CG30280-PD | 288 | CG30280-PD | 51..282 | 105..332 | 369 | 34.9 | Plus |
CG10359-PG | 459 | CG10359-PG | 173..449 | 50..328 | 360 | 34.5 | Plus |
CG10359-PE | 485 | CG10359-PE | 199..475 | 50..328 | 360 | 34.5 | Plus |
CG6788-PA | 358 | CG6788-PA | 178..356 | 151..329 | 347 | 41.1 | Plus |
CG31832-PB | 227 | CG31832-PB | 42..225 | 139..329 | 345 | 41.7 | Plus |
CG41520-PD | 627 | CG41520-PD | 404..615 | 121..329 | 338 | 35.5 | Plus |
CG41520-PA | 745 | CG41520-PA | 522..733 | 121..329 | 338 | 35.5 | Plus |
CG5550-PA | 246 | CG5550-PA | 45..246 | 125..329 | 318 | 39.3 | Plus |
CG5550-PB | 250 | CG5550-PB | 45..250 | 125..329 | 308 | 38.3 | Plus |
CG41520-PB | 729 | CG41520-PB | 522..717 | 121..329 | 296 | 33.2 | Plus |
sca-PB | 799 | CG17579-PB | 461..734 | 41..327 | 278 | 30 | Plus |
sca-PA | 799 | CG17579-PA | 461..734 | 41..327 | 278 | 30 | Plus |
CG9593-PB | 382 | CG9593-PB | 186..370 | 144..328 | 276 | 33.2 | Plus |
CG7668-PC | 422 | CG7668-PC | 245..420 | 139..328 | 248 | 35.1 | Plus |
CG7668-PA | 422 | CG7668-PA | 245..420 | 139..328 | 248 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14614-PA | 322 | GI14614-PA | 1..318 | 5..328 | 712 | 44.1 | Plus |
Dmoj\GI15995-PA | 204 | GI15995-PA | 36..160 | 207..331 | 514 | 72.8 | Plus |
Dmoj\GI10115-PA | 380 | GI10115-PA | 195..378 | 139..329 | 421 | 46.6 | Plus |
Dmoj\GI21094-PA | 389 | GI21094-PA | 110..387 | 40..331 | 416 | 34.7 | Plus |
Dmoj\GI18820-PA | 211 | GI18820-PA | 15..204 | 138..330 | 409 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16385-PA | 352 | GL16385-PA | 1..350 | 1..331 | 1290 | 75.7 | Plus |
Dper\GL26564-PA | 224 | GL26564-PA | 23..213 | 132..329 | 465 | 50 | Plus |
Dper\GL16674-PA | 447 | GL16674-PA | 165..439 | 50..328 | 387 | 35.3 | Plus |
Dper\GL11471-PA | 436 | GL11471-PA | 142..395 | 53..308 | 386 | 36.6 | Plus |
Dper\GL11776-PA | 236 | GL11776-PA | 9..220 | 119..331 | 383 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15110-PA | 338 | GA15110-PA | 1..334 | 1..329 | 1290 | 77.7 | Plus |
Dpse\GA14719-PA | 324 | GA14719-PA | 1..320 | 5..329 | 814 | 48.5 | Plus |
Dpse\GA28982-PA | 271 | GA28982-PA | 45..260 | 104..329 | 467 | 46.9 | Plus |
Dpse\GA21232-PA | 434 | GA21232-PA | 142..417 | 53..332 | 412 | 35.3 | Plus |
Dpse\GA28101-PA | 220 | GA28101-PA | 26..215 | 138..329 | 399 | 44.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18826-PA | 242 | GM18826-PA | 9..242 | 100..332 | 1225 | 96.2 | Plus |
Dsec\GM18824-PA | 334 | GM18824-PA | 1..330 | 5..328 | 802 | 47 | Plus |
Dsec\GM17946-PA | 293 | GM17946-PA | 79..289 | 119..330 | 402 | 39.3 | Plus |
Dsec\GM20674-PA | 418 | GM20674-PA | 122..405 | 45..332 | 402 | 35 | Plus |
Dsec\GM15883-PA | 292 | GM15883-PA | 52..277 | 105..331 | 384 | 38.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24781-PA | 332 | GD24781-PA | 1..332 | 1..332 | 1746 | 97.6 | Plus |
Dsim\GD24553-PA | 306 | GD24553-PA | 1..302 | 5..328 | 707 | 44.6 | Plus |
Dsim\GD22585-PA | 292 | GD22585-PA | 67..288 | 101..330 | 417 | 38.7 | Plus |
Dsim\GD11645-PA | 292 | GD11645-PA | 52..277 | 105..331 | 392 | 38.5 | Plus |
Dsim\GD11489-PA | 192 | GD11489-PA | 6..190 | 143..329 | 366 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18721-PA | 346 | GJ18721-PA | 1..344 | 1..331 | 1213 | 65.8 | Plus |
Dvir\GJ19428-PA | 324 | GJ19428-PA | 1..320 | 5..328 | 805 | 48.6 | Plus |
Dvir\GJ12860-PA | 287 | GJ12860-PA | 53..281 | 101..330 | 443 | 40.9 | Plus |
Dvir\GJ18368-PA | 262 | GJ18368-PA | 59..260 | 120..329 | 433 | 44.3 | Plus |
Dvir\GJ21847-PA | 226 | GJ21847-PA | 9..218 | 119..329 | 423 | 42.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25364-PA | 337 | GK25364-PA | 4..334 | 3..331 | 1350 | 74.3 | Plus |
Dwil\GK25564-PA | 336 | GK25564-PA | 1..332 | 5..328 | 785 | 46.8 | Plus |
Dwil\GK15365-PA | 215 | GK15365-PA | 19..208 | 138..331 | 414 | 42.8 | Plus |
Dwil\GK19592-PA | 195 | GK19592-PA | 2..194 | 138..331 | 406 | 42.6 | Plus |
Dwil\GK15364-PA | 211 | GK15364-PA | 18..208 | 137..330 | 400 | 42.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17819-PA | 332 | GE17819-PA | 1..330 | 1..330 | 1671 | 93.6 | Plus |
Dyak\GE15425-PA | 335 | GE15425-PA | 1..331 | 5..328 | 799 | 47.5 | Plus |
Dyak\GE14792-PA | 176 | GE14792-PA | 6..175 | 117..285 | 397 | 48.5 | Plus |
Dyak\GE18450-PA | 249 | GE18450-PA | 14..245 | 91..330 | 394 | 35.4 | Plus |
Dyak\GE12242-PA | 288 | GE12242-PA | 64..277 | 117..331 | 386 | 39.4 | Plus |
Translation from 80 to 1078
> GH12692.hyp MSQMLQLDALVMAMACLSTTQTDLGGGLLVPPSLGNASSSSCPVSALSGL TTRMQSLNNEIASVKEQIGSLQEQLVDLRRAGSAPVVGLASPNALASRFL DIEPQLLANGGAAAVPITPANCLKQQHGVVRIRPRSNVEPFFVFCDQKVR NGGWTMVVNRYDGSEDFNRKWADYKIGFGPLTTEFFIGLDKLHQITSSDN YELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHGDAADALRDH TGKKFSTHDRVNDENEQNCAAQQSGAFWYGGSCNLTNPFGLYQRLLERDV DGFKGILWRGFLNGPKGSLKIVRMMVRPRAAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1889-PC | 332 | CG1889-PC | 1..332 | 1..332 | 1731 | 100 | Plus |
CG1889-PA | 332 | CG1889-PA | 1..332 | 1..332 | 1731 | 100 | Plus |
CG1889-PD | 338 | CG1889-PD | 1..338 | 1..332 | 1714 | 98.2 | Plus |
CG1791-PC | 333 | CG1791-PC | 1..329 | 5..328 | 779 | 47.2 | Plus |
CG1791-PA | 334 | CG1791-PA | 1..330 | 5..328 | 773 | 47.2 | Plus |