Clone GH12701 Report

Search the DGRC for GH12701

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:127
Well:1
Vector:pOT2
Associated Gene/TranscriptCG32432-RA
Protein status:GH12701.pep: gold
Sequenced Size:4507

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13257 2002-01-01 Sim4 clustering to Release 2
CG32432 2002-04-26 Blastp of sequenced clone
CG32432 2003-01-01 Sim4 clustering to Release 3
CG32432 2008-04-29 Release 5.5 accounting
CG32432 2008-08-15 Release 5.9 accounting
CG32432 2008-12-18 5.12 accounting

Clone Sequence Records

GH12701.complete Sequence

4507 bp (4507 high quality bases) assembled on 2002-04-26

GenBank Submission: AY113343

> GH12701.complete
CGCAGTTCGACGTTGAAAATTGCGGGCTGCCTGTTCAGCGGACCGATGAT
GCCACGCGACCGAGAGAAATCCAGAGAAAGTGTTCAGTAAAAAATAAATT
TATACATAAGTTAAAATAAATATTTCCCGCGAAAAGGTGGCCAATAAATC
TCGTAAGGTGCAAGGGTGCAAATTGTGCTTTTAATCGGTGGAATATCCAC
ATTGGAATCGCGAATCGAAGCGCAAACTTTAAATTTAACTGTGAATTATA
TTGCTATTAAGTTCATCCACTCTACATTGGTGCTACCCAAGAATGCTCAA
CTAGGCGTATACGTGATAAAATCTAACCAAAGCCATTACGTAAAGTTCAA
CAGCCAGAATTGTTGCGTCTGACGATATGAACACAACAGTAATGACATTG
AAATGGCGCCAGAAATACAAAAGCAGAAAAAGGCCAAAGAAACTAAGACA
ACGAATATTTGCAACAAACACTGCCCCAGCAAAAGCAACAACAACACCAA
ACCATAAAGCAACAACAAAAGCAACCAGCAGACTGAGAGAAACAAGATGC
AAACTGAGGAGGCACAATAAATGTCTGCCAAGTGAACAACACAGAAATGT
AGCTAAAATGCGGCTGAAAGTGTCGACAAGTGCAACACAATGTCGCGCAA
TTAAAGCAACAGAAACACCAGCAACATCCAAAATGACTTCCAGCTGCAGC
GGCCATTGTCAGTCGCAACAGCAACAGCAGCAACAGCAGCACCAGTTGCA
GCAGCAGCATCAGCAGTCGCAACATCAACAGCGGCGACATCCACTTCCGG
CGACGCTGACGCTGCTCCTCTGCCTGGGAATCAGTTTGGGCATGGCTGCC
ACAGCAGCAGCCGCCGGCGGAGGAGGAGGTGGCGGAGGCGGAGCTGCACC
CGTTTCCGGATCCGGAGCAGCTGGCTTCCCATCCAGCTCTAGCTCCATCT
CGAGCTCCTTGGGGCCGGGCAAACCTGTCAATTTGCAACTGGCACCCGGC
TCCTCCTCGACGGGCTGTTCCCTCGCCGAATTCAGCTGCTCCAATGGAAG
ATGCGTGCCACTCAGCAAGTACTGCAACAATCTAAACGACTGCGGCGACG
GTAGTGACGAGCCGCGATTTTGTACACGCTGCAATCGCACCTACTACGGA
GACATTGGACAGACCTACGCCCTGGAGCTGCACCGCCCCAAACAGGATCG
CGTGCCCTTCGTGTGCGTGCTCACCTTCACGGCGGCAGGTGGACAACACG
GCGATGTGGTGCAGGTCACCCTGGACAGCTTCACGATTGGCAGGTTCACC
TCGTACGTCCATGAGGGTTGTCCGGATGGATACATGCAGATAGCGGAGTC
GGCACGGACTCCGATCGGTGGCATGTGGTGCGGCAGCTCCTGGGGACCAG
TGCTCTTCTACAGCGAGACCCGCTCCCTGATATTCACCATCCGGCTGAAC
AGACTGGCGAGGGATCAGAGTGGCTACAACTTCGACTTTCGCATCAGATA
CAAGGTTTTGTCCAGGGACAGTTCGGTGACCCGCTACGGGGGCATTAAGC
TGGCAGAGCTGGCCCAGTGGCACAACCGCAGTAGCTTTCTCAATCAGCAA
CAGCAACAGCAACAGCAACAGCAACAGCAGCAGCAGCAACAACAAGGCGC
TCCCGGTATCCTGGAGGATTTTACCAACTCCAGTGTAGCCCGTTCGGACC
GCTATGGCCAGGACTTTAGCCTTTTCAGCGCTTATGCCAACAACAAGACC
TTCATGGCCTCACTGGAGAAATCCTTGGCCAAGGACGAGCAGAACTACAC
GGAGCCCAAGTACTACCTGGGTGACCTCATACCCGGAACGTACTGCTCCA
GGATCTTCAGCGACTGCGACAAGAAGCCGTGTCGCCTGCAGTCGCCCAAC
TTTCCGGGCATCTATCCGCGCAACCTCACCTGCTACTATGCAGTGCGACA
GCACGACGTGCCCCATGGCAAACACGCCCTGATTCTAGTCAAACAGCCCA
AGGGCAATCTGGTCTGGATTTCCACCCAGGAAACGGCCGCGGCGAACAAA
ATGGCACCGCCACCGAGTGCCAGCGACAAGGATAAGAAATTCGAGCCGAG
GCTGAAAACATGGAATTACTGCGACTACATTCAGGAAAATGTAAAACCCA
AATGGAAATCCACGGACTACGTGACCGTGTACGACGGCTACACCACACGT
GACCCCATCATATTGAAGTTCTGCGGCGGTGGTCAGGCGGTGCCGGCGGC
CGTTTCCAGCGGTCCGGAGCTTTTGGTCGAGTTCAGCACGTCGCCGTTTG
GCACCTTCACCGGCACCTCGTCGCAGGTACTGCCGCTCTACGGATTCCAG
CTAGAGGTCGAAGTTCAATTCGTGGACATCCAGAGTCCCACGTACTCGAA
AAACAAGAAACCCTGCGAGTTTTGGATTCGCGGTGCAGGTCGTGGCATCC
TCGAGAGTCCCAAGCACTCGCTGGCTCCCAATTCCACGTGCCTGTATCAC
CTCCAAGGGCTGGGCGTCTTCAAGACCTTTGACCACCTGAGTTTGTCGCG
CAGGACGAGCAGTCAGTCGGGGATGCATCAACCGCTCTCCCGGTTCAAGG
TGTGGATTTCTGTTCTGAAGTTCAACTTGGATCCGGAGTTTGGCCAGATA
GATGAGACATCCGTGGGCGCAATTGGAGTGCTGCAAACGCAGGAGGATTG
CAGTGGAATGCTGCGCATCTGGGATGGAACACTAAGGGATGCACCCGTTT
GCAAGGACTTGAACTGTGCCACCGAGACGAGTAGTTATAACACCTTGGGT
CACTACACCCATAACTCCACTAGTGTGATTGCCAGATTTTGTCGGGGCAC
AATACCACGCACCTGTGATAGATCTAACATAAACGAGACCTACGCAAGAC
CATGCACCATCTCGGAGAGCTATGTGTCCACCAGCGATGCCATTACGCTC
GAGCTACGCAACACGGAATCCACAGTATTAAGACCACTGGATTTCAAGCT
GAAGTACGAGTTCATTGATTTGCACCAGGATGGTTTGCCTTGGGGTGGTG
GGGAACACGATTGCAATCGGAAGTTCCTTAGCAGCATGATGGATCGCAAG
GATCCTGCCATCTTCCGCAGTGTCCGCAACATATTCCTATTTGGAAGAGG
AGGAACTAGAAACCTTAAATGCATCTATAAATTCGAGGCACAGCGAGGCG
AAAGGGTCAGAATCAAGATGAGAAAAGTAACGACCACCAACAGACCGTGC
TATTCACGTGTGGATGAGGATATCAATCGCTCCTTTTGCTATGGCGATAC
CAATGTCAGAATTGAGATCTTTGAGCGACCCTACCATGATTCCATTTTAC
TTCATCGAGGCTGCATGTGCAACTCCTCTAACCAATCCCACCTACCGGTG
GAATACACGTCTACAAGTCGCGATGTGGAGGTGCACTTCATCGCCCAAAA
CATGACCACCTTGGACGATCCAGATACGGTTAACTTCGAGGGTATGTTTG
AGTTCGTCAAGGCTCCAACAAGCTGCAAGGATGGACGCAGGAAATTCGGA
CCAAGTGGCACTATAGACATGACCTTCGGAGACGTGGAGTGCCGCTCAAG
ACCCTGGCTCATTGAGCCTTCTAATGGCAACAAGTTTTTGTACGTCCGCC
TGAAGGCCATTTTCTTGAGTAAACACAATCCCACGCAGACACTGAACGCG
ACCTATGTGCAGACAGATACTTGGAGATGTGAGACCAAGTCCAGAGCTGT
ACTAACCACGTCGGAGGGCCTAACCATTGTGGCTTGTCCACTGAGTCCCG
ACTCGAATGCCTACGAGTTTGTGGAGATCTTTAGTTCCGGATGGAACGAA
AGGCCAAATTTTGCGCTTGTCAATCGATCCCGAGCCATCAGCGTCGAGTT
CCTGCGTCCTGGCAACGGGGAGTACTCCTTCAACTGGATGGAACTGATTC
CCAGGCCCACACTGAGCATGGCGGAGGACTGCCAGTTTAAGTGTGCCGAA
TTGGGTGCCTGTGTAAATGCCAGTGTTTGGTGTGATGGTGTAGTCCACTG
TCCTTCCGGGGACGATGAGACCTTCCTGCAGTGTTCAGCCTTGATGAAAC
TGCCCGCCGAGATCCTGGCCACGCTCTGCCTCATCTTTGTGCTCTCGTGT
TGTGCTTTCGCTGCCTTTGCCTACAAGAAAATCAAACGCAAGCTGCGCGG
CTCCTCGGTGCTGCAGACGCGACTCAAATCGCTGAGCTCGATGGACACGG
CCGTTCTGGATGAAAAGGAGAAAAAACCCGTCGTTGAAACCAAGATCTAA
GGCTCGGGGATCGAAAGCAAAGCAAAAAGCACGGCCTGGCCAAAAAGGAG
GGAGCAGGGATCAGGGACTCGGAAAATACAACACAACAGAGTGTGAATCA
GTCGAAATTATATTTTTGTTTAAACTCTTCTTCCTTTTCAAGAACTGTAA
ATAAAACAAATAGAAGCTGTATGATATTAACAATTTTAAAAAAAAAAAAA
AAAAAAA

GH12701.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:12:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG32432-RA 4513 CG32432-RA 20..4507 1..4488 22440 100 Plus
fru.c 2852 fru.c 2481..2555 715..789 210 85.3 Plus
fru-RH 4526 fru-RH 4349..4423 715..789 210 85.3 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:50:49
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 20848699..20849446 1128..381 3740 100 Minus
chr3L 24539361 chr3L 20836857..20837268 2766..2355 2060 100 Minus
chr3L 24539361 chr3L 20836199..20836534 3316..2981 1680 100 Minus
chr3L 24539361 chr3L 20835873..20836143 3585..3315 1355 100 Minus
chr3L 24539361 chr3L 20843621..20843891 1824..1554 1355 100 Minus
chr3L 24539361 chr3L 20833353..20833571 4487..4269 1095 100 Minus
chr3L 24539361 chr3L 20836586..20836802 2982..2766 1085 100 Minus
chr3L 24539361 chr3L 20835370..20835577 3974..3767 1040 100 Minus
chr3L 24539361 chr3L 20835110..20835313 4177..3974 1020 100 Minus
chr3L 24539361 chr3L 20874010..20874208 199..1 995 100 Minus
chr3L 24539361 chr3L 20837342..20837536 2358..2164 975 100 Minus
chr3L 24539361 chr3L 20844124..20844313 1452..1263 950 100 Minus
chr3L 24539361 chr3L 20841599..20841786 2135..1948 940 100 Minus
chr3L 24539361 chr3L 20835632..20835816 3768..3584 925 100 Minus
chr3L 24539361 chr3L 20870650..20870830 380..200 905 100 Minus
chr3L 24539361 chr3L 20845444..20845582 1266..1128 695 100 Minus
chr3L 24539361 chr3L 20843077..20843208 1951..1820 660 100 Minus
chr3L 24539361 chr3L 20843957..20844064 1556..1449 540 100 Minus
chr3L 24539361 chr3L 20834950..20835043 4270..4177 470 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:47:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:50:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20859679..20860426 1128..381 3740 100 Minus
3L 28110227 3L 20847836..20848247 2766..2355 2060 100 Minus
3L 28110227 3L 20847178..20847513 3316..2981 1680 100 Minus
3L 28110227 3L 20846852..20847122 3585..3315 1355 100 Minus
3L 28110227 3L 20854601..20854871 1824..1554 1355 100 Minus
3L 28110227 3L 20844331..20844550 4488..4269 1100 100 Minus
3L 28110227 3L 20847565..20847781 2982..2766 1085 100 Minus
3L 28110227 3L 20846349..20846556 3974..3767 1040 100 Minus
3L 28110227 3L 20846089..20846292 4177..3974 1020 100 Minus
3L 28110227 3L 20884990..20885188 199..1 995 100 Minus
3L 28110227 3L 20848321..20848515 2358..2164 975 100 Minus
3L 28110227 3L 20855104..20855293 1452..1263 950 100 Minus
3L 28110227 3L 20852578..20852765 2135..1948 940 100 Minus
3L 28110227 3L 20846611..20846795 3768..3584 925 100 Minus
3L 28110227 3L 20881630..20881810 380..200 905 100 Minus
3L 28110227 3L 20856424..20856562 1266..1128 695 100 Minus
3L 28110227 3L 20854057..20854188 1951..1820 660 100 Minus
3L 28110227 3L 20854937..20855044 1556..1449 540 100 Minus
3L 28110227 3L 20845929..20846022 4270..4177 470 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:42:37
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 20852779..20853526 1128..381 3740 100 Minus
3L 28103327 3L 20840936..20841347 2766..2355 2060 100 Minus
3L 28103327 3L 20840278..20840613 3316..2981 1680 100 Minus
3L 28103327 3L 20847701..20847971 1824..1554 1355 100 Minus
3L 28103327 3L 20839952..20840222 3585..3315 1355 100 Minus
3L 28103327 3L 20837431..20837650 4488..4269 1100 100 Minus
3L 28103327 3L 20840665..20840881 2982..2766 1085 100 Minus
3L 28103327 3L 20839449..20839656 3974..3767 1040 100 Minus
3L 28103327 3L 20839189..20839392 4177..3974 1020 100 Minus
3L 28103327 3L 20878090..20878288 199..1 995 100 Minus
3L 28103327 3L 20841421..20841615 2358..2164 975 100 Minus
3L 28103327 3L 20848204..20848393 1452..1263 950 100 Minus
3L 28103327 3L 20845678..20845865 2135..1948 940 100 Minus
3L 28103327 3L 20839711..20839895 3768..3584 925 100 Minus
3L 28103327 3L 20874730..20874910 380..200 905 100 Minus
3L 28103327 3L 20849524..20849662 1266..1128 695 100 Minus
3L 28103327 3L 20847157..20847288 1951..1820 660 100 Minus
3L 28103327 3L 20848037..20848144 1556..1449 540 100 Minus
3L 28103327 3L 20839029..20839122 4270..4177 470 100 Minus
3R 31820162 3R 18163572..18163646 789..715 210 85.3 Minus
3L 28103327 3L 20844512..20844544 2165..2133 165 100 Minus
Blast to na_te.dros performed 2019-03-16 07:50:47
Subject Length Description Subject Range Query Range Score Percent Strand
springer 7546 springer SPRINGER 7546bp Derived from BACR06P08 by Sue Celniker, 29 March 2001. 2913..2960 1067..1020 123 72.9 Minus

GH12701.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:51:28 Download gff for GH12701.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 20833353..20833569 4271..4487 100 <- Minus
chr3L 20834950..20835043 4177..4270 100 <- Minus
chr3L 20835111..20835312 3975..4176 100 <- Minus
chr3L 20835370..20835576 3768..3974 100 <- Minus
chr3L 20835633..20835816 3584..3767 100 <- Minus
chr3L 20835875..20836141 3317..3583 100 <- Minus
chr3L 20836199..20836532 2983..3316 100 <- Minus
chr3L 20836586..20836801 2767..2982 100 <- Minus
chr3L 20836857..20837266 2357..2766 100 <- Minus
chr3L 20837344..20837535 2165..2356 100 <- Minus
chr3L 20840434..20840463 2135..2164 100 <- Minus
chr3L 20841600..20841782 1952..2134 100 <- Minus
chr3L 20843077..20843207 1821..1951 100 <- Minus
chr3L 20843625..20843888 1557..1820 100 <- Minus
chr3L 20843957..20844060 1453..1556 100 <- Minus
chr3L 20844124..20844311 1265..1452 100 <- Minus
chr3L 20845446..20845582 1128..1264 100 <- Minus
chr3L 20848700..20849446 381..1127 100 <- Minus
chr3L 20870650..20870830 200..380 100 <- Minus
chr3L 20874010..20874208 1..199 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:19:13 Download gff for GH12701.complete
Subject Subject Range Query Range Percent Splice Strand
CG32432-RA 1..3924 377..4300 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:57:17 Download gff for GH12701.complete
Subject Subject Range Query Range Percent Splice Strand
CG32432-RA 1..3924 377..4300 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:48:48 Download gff for GH12701.complete
Subject Subject Range Query Range Percent Splice Strand
CG32432-RA 1..3924 377..4300 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:50:36 Download gff for GH12701.complete
Subject Subject Range Query Range Percent Splice Strand
CG32432-RA 1..3924 377..4300 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:41:37 Download gff for GH12701.complete
Subject Subject Range Query Range Percent Splice Strand
CG32432-RA 1..3924 377..4300 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:19:11 Download gff for GH12701.complete
Subject Subject Range Query Range Percent Splice Strand
CG32432-RA 1..4487 1..4487 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:57:16 Download gff for GH12701.complete
Subject Subject Range Query Range Percent Splice Strand
CG32432-RA 1..4487 1..4487 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:48:48 Download gff for GH12701.complete
Subject Subject Range Query Range Percent Splice Strand
CG32432-RA 1..4487 1..4487 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:50:36 Download gff for GH12701.complete
Subject Subject Range Query Range Percent Splice Strand
CG32432-RA 1..4487 1..4487 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:41:37 Download gff for GH12701.complete
Subject Subject Range Query Range Percent Splice Strand
CG32432-RA 1..4487 1..4487 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:51:28 Download gff for GH12701.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20846612..20846795 3584..3767 100 <- Minus
3L 20856426..20856562 1128..1264 100 <- Minus
3L 20846349..20846555 3768..3974 100 <- Minus
3L 20844332..20844548 4271..4487 100 <- Minus
3L 20845929..20846022 4177..4270 100 <- Minus
3L 20846090..20846291 3975..4176 100 <- Minus
3L 20846854..20847120 3317..3583 100 <- Minus
3L 20847178..20847511 2983..3316 100 <- Minus
3L 20847565..20847780 2767..2982 100 <- Minus
3L 20847836..20848245 2357..2766 100 <- Minus
3L 20848323..20848514 2165..2356 100 <- Minus
3L 20851413..20851442 2135..2164 100 <- Minus
3L 20852579..20852761 1952..2134 100 <- Minus
3L 20854057..20854187 1821..1951 100 <- Minus
3L 20854605..20854868 1557..1820 100 <- Minus
3L 20854937..20855040 1453..1556 100 <- Minus
3L 20855104..20855291 1265..1452 100 <- Minus
3L 20859680..20860426 381..1127 100 <- Minus
3L 20881630..20881810 200..380 100 <- Minus
3L 20884990..20885188 1..199 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:51:28 Download gff for GH12701.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20846612..20846795 3584..3767 100 <- Minus
3L 20856426..20856562 1128..1264 100 <- Minus
3L 20846349..20846555 3768..3974 100 <- Minus
3L 20844332..20844548 4271..4487 100 <- Minus
3L 20845929..20846022 4177..4270 100 <- Minus
3L 20846090..20846291 3975..4176 100 <- Minus
3L 20846854..20847120 3317..3583 100 <- Minus
3L 20847178..20847511 2983..3316 100 <- Minus
3L 20847565..20847780 2767..2982 100 <- Minus
3L 20847836..20848245 2357..2766 100 <- Minus
3L 20848323..20848514 2165..2356 100 <- Minus
3L 20851413..20851442 2135..2164 100 <- Minus
3L 20852579..20852761 1952..2134 100 <- Minus
3L 20854057..20854187 1821..1951 100 <- Minus
3L 20854605..20854868 1557..1820 100 <- Minus
3L 20854937..20855040 1453..1556 100 <- Minus
3L 20855104..20855291 1265..1452 100 <- Minus
3L 20859680..20860426 381..1127 100 <- Minus
3L 20881630..20881810 200..380 100 <- Minus
3L 20884990..20885188 1..199 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:51:28 Download gff for GH12701.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20846612..20846795 3584..3767 100 <- Minus
3L 20856426..20856562 1128..1264 100 <- Minus
3L 20846349..20846555 3768..3974 100 <- Minus
3L 20844332..20844548 4271..4487 100 <- Minus
3L 20845929..20846022 4177..4270 100 <- Minus
3L 20846090..20846291 3975..4176 100 <- Minus
3L 20846854..20847120 3317..3583 100 <- Minus
3L 20847178..20847511 2983..3316 100 <- Minus
3L 20847565..20847780 2767..2982 100 <- Minus
3L 20847836..20848245 2357..2766 100 <- Minus
3L 20848323..20848514 2165..2356 100 <- Minus
3L 20851413..20851442 2135..2164 100 <- Minus
3L 20852579..20852761 1952..2134 100 <- Minus
3L 20854057..20854187 1821..1951 100 <- Minus
3L 20854605..20854868 1557..1820 100 <- Minus
3L 20854937..20855040 1453..1556 100 <- Minus
3L 20855104..20855291 1265..1452 100 <- Minus
3L 20859680..20860426 381..1127 100 <- Minus
3L 20881630..20881810 200..380 100 <- Minus
3L 20884990..20885188 1..199 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:48:48 Download gff for GH12701.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20839712..20839895 3584..3767 100 <- Minus
arm_3L 20839954..20840220 3317..3583 100 <- Minus
arm_3L 20837432..20837648 4271..4487 100 <- Minus
arm_3L 20839029..20839122 4177..4270 100 <- Minus
arm_3L 20839190..20839391 3975..4176 100 <- Minus
arm_3L 20839449..20839655 3768..3974 100 <- Minus
arm_3L 20840278..20840611 2983..3316 100 <- Minus
arm_3L 20840665..20840880 2767..2982 100 <- Minus
arm_3L 20840936..20841345 2357..2766 100 <- Minus
arm_3L 20841423..20841614 2165..2356 100 <- Minus
arm_3L 20844513..20844542 2135..2164 100 <- Minus
arm_3L 20845679..20845861 1952..2134 100 <- Minus
arm_3L 20847157..20847287 1821..1951 100 <- Minus
arm_3L 20847705..20847968 1557..1820 100 <- Minus
arm_3L 20848037..20848140 1453..1556 100 <- Minus
arm_3L 20848204..20848391 1265..1452 100 <- Minus
arm_3L 20849526..20849662 1128..1264 100 <- Minus
arm_3L 20852780..20853526 381..1127 100 <- Minus
arm_3L 20874730..20874910 200..380 100 <- Minus
arm_3L 20878090..20878288 1..199 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:22:32 Download gff for GH12701.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20849526..20849662 1128..1264 100 <- Minus
3L 20837432..20837648 4271..4487 100 <- Minus
3L 20839029..20839122 4177..4270 100 <- Minus
3L 20839190..20839391 3975..4176 100 <- Minus
3L 20839449..20839655 3768..3974 100 <- Minus
3L 20839712..20839895 3584..3767 100 <- Minus
3L 20839954..20840220 3317..3583 100 <- Minus
3L 20840278..20840611 2983..3316 100 <- Minus
3L 20840665..20840880 2767..2982 100 <- Minus
3L 20840936..20841345 2357..2766 100 <- Minus
3L 20841423..20841614 2165..2356 100 <- Minus
3L 20844513..20844542 2135..2164 100 <- Minus
3L 20845679..20845861 1952..2134 100 <- Minus
3L 20847157..20847287 1821..1951 100 <- Minus
3L 20847705..20847968 1557..1820 100 <- Minus
3L 20848037..20848140 1453..1556 100 <- Minus
3L 20848204..20848391 1265..1452 100 <- Minus
3L 20852780..20853526 381..1127 100 <- Minus
3L 20874730..20874910 200..380 100 <- Minus
3L 20878090..20878288 1..199 100   Minus

GH12701.pep Sequence

Translation from 376 to 4299

> GH12701.pep
MNTTVMTLKWRQKYKSRKRPKKLRQRIFATNTAPAKATTTPNHKATTKAT
SRLRETRCKLRRHNKCLPSEQHRNVAKMRLKVSTSATQCRAIKATETPAT
SKMTSSCSGHCQSQQQQQQQQHQLQQQHQQSQHQQRRHPLPATLTLLLCL
GISLGMAATAAAAGGGGGGGGGAAPVSGSGAAGFPSSSSSISSSLGPGKP
VNLQLAPGSSSTGCSLAEFSCSNGRCVPLSKYCNNLNDCGDGSDEPRFCT
RCNRTYYGDIGQTYALELHRPKQDRVPFVCVLTFTAAGGQHGDVVQVTLD
SFTIGRFTSYVHEGCPDGYMQIAESARTPIGGMWCGSSWGPVLFYSETRS
LIFTIRLNRLARDQSGYNFDFRIRYKVLSRDSSVTRYGGIKLAELAQWHN
RSSFLNQQQQQQQQQQQQQQQQQGAPGILEDFTNSSVARSDRYGQDFSLF
SAYANNKTFMASLEKSLAKDEQNYTEPKYYLGDLIPGTYCSRIFSDCDKK
PCRLQSPNFPGIYPRNLTCYYAVRQHDVPHGKHALILVKQPKGNLVWIST
QETAAANKMAPPPSASDKDKKFEPRLKTWNYCDYIQENVKPKWKSTDYVT
VYDGYTTRDPIILKFCGGGQAVPAAVSSGPELLVEFSTSPFGTFTGTSSQ
VLPLYGFQLEVEVQFVDIQSPTYSKNKKPCEFWIRGAGRGILESPKHSLA
PNSTCLYHLQGLGVFKTFDHLSLSRRTSSQSGMHQPLSRFKVWISVLKFN
LDPEFGQIDETSVGAIGVLQTQEDCSGMLRIWDGTLRDAPVCKDLNCATE
TSSYNTLGHYTHNSTSVIARFCRGTIPRTCDRSNINETYARPCTISESYV
STSDAITLELRNTESTVLRPLDFKLKYEFIDLHQDGLPWGGGEHDCNRKF
LSSMMDRKDPAIFRSVRNIFLFGRGGTRNLKCIYKFEAQRGERVRIKMRK
VTTTNRPCYSRVDEDINRSFCYGDTNVRIEIFERPYHDSILLHRGCMCNS
SNQSHLPVEYTSTSRDVEVHFIAQNMTTLDDPDTVNFEGMFEFVKAPTSC
KDGRRKFGPSGTIDMTFGDVECRSRPWLIEPSNGNKFLYVRLKAIFLSKH
NPTQTLNATYVQTDTWRCETKSRAVLTTSEGLTIVACPLSPDSNAYEFVE
IFSSGWNERPNFALVNRSRAISVEFLRPGNGEYSFNWMELIPRPTLSMAE
DCQFKCAELGACVNASVWCDGVVHCPSGDDETFLQCSALMKLPAEILATL
CLIFVLSCCAFAAFAYKKIKRKLRGSSVLQTRLKSLSSMDTAVLDEKEKK
PVVETKI*

GH12701.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:46:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10200-PA 1292 GF10200-PA 1..1292 4..1307 5856 87.1 Plus
Dana\GF10763-PA 1264 GF10763-PA 44..242 213..388 457 43.3 Plus
Dana\GF10763-PA 1264 GF10763-PA 250..464 481..711 412 37.9 Plus
Dana\GF10763-PA 1264 GF10763-PA 668..1042 827..1190 381 29.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:46:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13276-PA 1136 GG13276-PA 1..1136 156..1307 6061 97.3 Plus
Dere\GG13410-PA 1263 GG13410-PA 48..246 213..388 459 43.8 Plus
Dere\GG13410-PA 1263 GG13410-PA 254..468 481..711 413 37.9 Plus
Dere\GG13410-PA 1263 GG13410-PA 675..1049 827..1190 380 29 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:46:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15565-PA 1132 GH15565-PA 36..1129 198..1298 5442 91.2 Plus
Dgri\GH14406-PA 1206 GH14406-PA 5..202 214..388 460 44 Plus
Dgri\GH14406-PA 1206 GH14406-PA 210..424 481..711 412 37.9 Plus
Dgri\GH14406-PA 1206 GH14406-PA 635..1009 827..1190 366 28.8 Plus
Dgri\GH14406-PA 1206 GH14406-PA 1087..1176 1201..1292 159 39.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:19:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG32432-PA 1307 CG32432-PA 1..1307 1..1307 6975 100 Plus
CG32432-PB 1297 CG32432-PB 1..1297 1..1307 6897 99.2 Plus
CG32206-PB 1260 CG32206-PB 49..246 214..388 458 44 Plus
CG32206-PE 1278 CG32206-PE 49..246 214..388 458 44 Plus
CG32206-PB 1260 CG32206-PB 254..468 481..711 412 37.9 Plus
CG32206-PE 1278 CG32206-PE 254..468 481..711 412 37.9 Plus
CG32206-PB 1260 CG32206-PB 675..1049 827..1190 375 29 Plus
CG32206-PE 1278 CG32206-PE 675..1049 827..1190 375 29 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:46:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16841-PA 1183 GI16841-PA 106..1180 216..1298 5447 92.3 Plus
Dmoj\GI13535-PA 1242 GI13535-PA 31..226 216..388 419 42.4 Plus
Dmoj\GI13535-PA 1242 GI13535-PA 234..448 481..711 413 37.9 Plus
Dmoj\GI13535-PA 1242 GI13535-PA 660..1034 827..1190 372 28.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:46:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26301-PA 421 GL26301-PA 1..421 880..1307 2163 92.3 Plus
Dper\GL26290-PA 496 GL26290-PA 187..479 566..858 1364 88.1 Plus
Dper\GL26290-PA 496 GL26290-PA 84..220 394..528 556 89.1 Plus
Dper\GL20900-PA 1269 GL20900-PA 41..238 214..388 460 44 Plus
Dper\GL20900-PA 1269 GL20900-PA 246..460 481..711 404 37.4 Plus
Dper\GL20900-PA 1269 GL20900-PA 675..1049 827..1190 374 28.8 Plus
Dper\GL26290-PA 496 GL26290-PA 27..84 197..251 246 81 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:47:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23669-PB 1337 GA23669-PB 222..1337 197..1307 5614 93.3 Plus
Dpse\GA16757-PA 1267 GA16757-PA 41..238 214..388 460 44 Plus
Dpse\GA16757-PA 1267 GA16757-PA 246..460 481..711 405 37.4 Plus
Dpse\GA16757-PA 1267 GA16757-PA 675..1049 827..1190 374 28.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:47:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22180-PA 1289 GM22180-PA 1..1289 1..1307 6803 96.6 Plus
Dsec\GM18884-PA 1242 GM18884-PA 30..228 213..388 460 43.8 Plus
Dsec\GM18884-PA 1242 GM18884-PA 236..450 481..711 414 37.9 Plus
Dsec\GM18884-PA 1242 GM18884-PA 657..1031 827..1190 381 29 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:47:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12155-PA 918 GD12155-PA 127..918 516..1307 4248 98.6 Plus
Dsim\GD12285-PA 1257 GD12285-PA 48..246 213..388 459 43.8 Plus
Dsim\GD12285-PA 1257 GD12285-PA 254..465 481..711 409 38.7 Plus
Dsim\GD12285-PA 1257 GD12285-PA 672..1046 827..1190 380 29 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:47:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12590-PA 1161 GJ12590-PA 95..1158 216..1298 5418 92.1 Plus
Dvir\GJ11894-PA 1230 GJ11894-PA 31..228 214..388 460 44 Plus
Dvir\GJ11894-PA 1230 GJ11894-PA 236..450 481..711 411 37.9 Plus
Dvir\GJ11894-PA 1230 GJ11894-PA 663..1037 827..1190 365 28.8 Plus
Dvir\GJ11894-PA 1230 GJ11894-PA 1111..1187 1201..1272 159 40.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:47:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13496-PA 1143 GK13496-PA 39..1140 202..1298 5585 94 Plus
Dwil\GK19545-PA 1271 GK19545-PA 52..249 214..388 456 43.5 Plus
Dwil\GK19545-PA 1271 GK19545-PA 257..516 481..745 414 34.4 Plus
Dwil\GK19545-PA 1271 GK19545-PA 683..1057 827..1190 376 29 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:47:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22373-PA 1050 GE22373-PA 3..1050 252..1307 5646 98.3 Plus
Dyak\GE22929-PA 1298 GE22929-PA 48..503 213..711 682 33.3 Plus
Dyak\GE22924-PA 754 GE22924-PA 166..540 827..1190 382 29 Plus
Dyak\GE22929-PA 1298 GE22929-PA 710..1084 827..1190 381 29 Plus
Dyak\GE22924-PA 754 GE22924-PA 617..693 1201..1272 158 40.3 Plus

GH12701.hyp Sequence

Translation from 376 to 4299

> GH12701.hyp
MNTTVMTLKWRQKYKSRKRPKKLRQRIFATNTAPAKATTTPNHKATTKAT
SRLRETRCKLRRHNKCLPSEQHRNVAKMRLKVSTSATQCRAIKATETPAT
SKMTSSCSGHCQSQQQQQQQQHQLQQQHQQSQHQQRRHPLPATLTLLLCL
GISLGMAATAAAAGGGGGGGGGAAPVSGSGAAGFPSSSSSISSSLGPGKP
VNLQLAPGSSSTGCSLAEFSCSNGRCVPLSKYCNNLNDCGDGSDEPRFCT
RCNRTYYGDIGQTYALELHRPKQDRVPFVCVLTFTAAGGQHGDVVQVTLD
SFTIGRFTSYVHEGCPDGYMQIAESARTPIGGMWCGSSWGPVLFYSETRS
LIFTIRLNRLARDQSGYNFDFRIRYKVLSRDSSVTRYGGIKLAELAQWHN
RSSFLNQQQQQQQQQQQQQQQQQGAPGILEDFTNSSVARSDRYGQDFSLF
SAYANNKTFMASLEKSLAKDEQNYTEPKYYLGDLIPGTYCSRIFSDCDKK
PCRLQSPNFPGIYPRNLTCYYAVRQHDVPHGKHALILVKQPKGNLVWIST
QETAAANKMAPPPSASDKDKKFEPRLKTWNYCDYIQENVKPKWKSTDYVT
VYDGYTTRDPIILKFCGGGQAVPAAVSSGPELLVEFSTSPFGTFTGTSSQ
VLPLYGFQLEVEVQFVDIQSPTYSKNKKPCEFWIRGAGRGILESPKHSLA
PNSTCLYHLQGLGVFKTFDHLSLSRRTSSQSGMHQPLSRFKVWISVLKFN
LDPEFGQIDETSVGAIGVLQTQEDCSGMLRIWDGTLRDAPVCKDLNCATE
TSSYNTLGHYTHNSTSVIARFCRGTIPRTCDRSNINETYARPCTISESYV
STSDAITLELRNTESTVLRPLDFKLKYEFIDLHQDGLPWGGGEHDCNRKF
LSSMMDRKDPAIFRSVRNIFLFGRGGTRNLKCIYKFEAQRGERVRIKMRK
VTTTNRPCYSRVDEDINRSFCYGDTNVRIEIFERPYHDSILLHRGCMCNS
SNQSHLPVEYTSTSRDVEVHFIAQNMTTLDDPDTVNFEGMFEFVKAPTSC
KDGRRKFGPSGTIDMTFGDVECRSRPWLIEPSNGNKFLYVRLKAIFLSKH
NPTQTLNATYVQTDTWRCETKSRAVLTTSEGLTIVACPLSPDSNAYEFVE
IFSSGWNERPNFALVNRSRAISVEFLRPGNGEYSFNWMELIPRPTLSMAE
DCQFKCAELGACVNASVWCDGVVHCPSGDDETFLQCSALMKLPAEILATL
CLIFVLSCCAFAAFAYKKIKRKLRGSSVLQTRLKSLSSMDTAVLDEKEKK
PVVETKI*

GH12701.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:34:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG32432-PA 1307 CG32432-PA 1..1307 1..1307 6975 100 Plus
CG32432-PB 1297 CG32432-PB 1..1297 1..1307 6897 99.2 Plus
CG32206-PB 1260 CG32206-PB 49..246 214..388 458 44 Plus
CG32206-PE 1278 CG32206-PE 49..246 214..388 458 44 Plus
CG32206-PB 1260 CG32206-PB 254..468 481..711 412 37.9 Plus
CG32206-PE 1278 CG32206-PE 254..468 481..711 412 37.9 Plus
CG32206-PB 1260 CG32206-PB 675..1049 827..1190 375 29 Plus
CG32206-PE 1278 CG32206-PE 675..1049 827..1190 375 29 Plus