BDGP Sequence Production Resources |
Search the DGRC for GH12731
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 127 |
Well: | 31 |
Vector: | pOT2 |
Associated Gene/Transcript | Gfat2-RA |
Protein status: | GH12731.pep: gold |
Preliminary Size: | 2219 |
Sequenced Size: | 2532 |
Gene | Date | Evidence |
---|---|---|
CG1345 | 2001-01-01 | Release 2 assignment |
CG1345 | 2002-04-09 | Blastp of sequenced clone |
CG12449 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1345 | 2003-01-01 | Sim4 clustering to Release 3 |
Gfat2 | 2008-04-29 | Release 5.5 accounting |
Gfat2 | 2008-08-15 | Release 5.9 accounting |
Gfat2 | 2008-12-18 | 5.12 accounting |
2532 bp (2532 high quality bases) assembled on 2002-04-09
GenBank Submission: AY095175
> GH12731.complete AAATAATTGGGTTGGTTTATCAGAGAAAAACAAAAAAAATTCCAGCCAGT GTCGCGATAAAAACACGACAATCGCATTGCAGCCGCCTCAGAAGTGTAAG ATCAGCCTCAGCTGACCGGAAAGTTAACATTGCGACGTGGAAAACCACGA ATCACCAGCAAATTTCAGCAAAAGCAATCGCATTTCAGAATGTGTGGCAT ATTCGCGTACCTAAACTACTTGACGCCCAAGTCGCGACAGGAGGTCCTGG ATCTCCTGTTGCAGGGACTGAAGCGGCTGGAGTACCGCGGCTACGACTCC ACGGGCATAGCCATCGATGCGCTGAACTCTGGCGAGGCACAGTCCATAAT GCTGGTGAAGCGCACCGGGAAGGTGAAGGTGCTGGAGGATGCGGTGGCGG AGGTGTGTCGCGGCCAGGACTACTCGCTGCCCATCGACACCCACATAGGC ATAGCACACACGCGCTGGGCCACCCACGGTGTGCCCTCCGAGGTCAACTC GCATCCGCAGCGATCCGATGAGGATAATAGCTTTGTGGTGGTGCACAATG GCATTATAACCAACTACAAGGATGTGAAGACGCTGCTGGAGAAGCGCGGA TATGTATTTGAGTCCGACACGGACACGGAGGTGATTGCCAAGCTGGTACA CCACCTGTGGCAGCAGCATCCTGGCTACACTTTCGGCGAGCTCGTGGAGC AGGCCATTCAGCAGCTGGAGGGCGCCTTCGCCATCGCCTTCAAGTCGAAG CACTTCCCGGGCGAGTGCGTGGCCTCCAGGCGAGGCTCACCGCTTCTGGT GGGCATCAAGGCCAAGACCAAGCTGGCCACCGATCACATACCCATCCTGT ACGCCAAGGCCCATCGGCCACATGGTCAGCCGCAGCAGCAGGCCTATCAA CTATTGCCGCCCGGCGATTGCAACGCCGAGTTTCAACCGCTGGAGCGCAA GGAAGTGGAGTACTTCTTCGCCTCGGACGCATCGGCTGTTATAGAGCACA CGAATCGGGTGATTTACCTGGAAGATGACGACGTGGCCGCCGTCAAGAGC GATGGCACGCTCAGCATTCATCGCCTAAACAAATCATCCGATGATCCGCA CGCCCGCGAGATCATCACGCTGAAAATGGAGATCCAGCAGATCATGAAGG GCAACTACGACTACTTTATGCTGAAGGAGATCTTCGAGCAGCCGGAATCC GTGGTCAACACCATGCGCGGCAGGATGAGGTTCGATACGCAGACCGTGGT TCTGGGTGGCATCAAGGAGTACATACCGGAGATCAAGCGCTGCCGCCGCT TGATGCTAATTGCGTGCGGCACATCCTACCACAGTGCGGTGGCCACCAGG CAGCTGCTGGAGGAACTGACCGAACTGCCCGTTATGGTGGAACTGGCCTC CGATTTTCTGGACAGAAACACGCCCATTTTCCGGGACGACGTGTGCTTCT TCATCTCCCAATCGGGCGAGACAGCGGACACCCTGATGGCGCTCAGATAC TGCAAGCAGCGAGGAGCGCTCATCGTGGGCGTTACCAACACGGTGGGCAG CAGCATCTGCCGCGAGTCGCACTGTGGCGTCCACATCAACGCTGGACCCG AGATCGGAGTGGCCTCCACGAAGGCCTACACCTCCCAGTTCATTTCGCTG GTTATGTTCGCCTTGGTCATGTCGGAGGATCGTCTCTCGCTGCAACAGCG CCGCTTGGAGATCATCGATGGCCTATCGCAGCTGGACGAGCACATTAGGA CTGTCCTCAAGCTGAACTCGCAGGTGCAGCAGCTTGCCAAGGAGTTGTAC GAGCACAAGTCGCTGCTCATTATGGGCAGGGGCTTCAACTTCGCCACCTG TTTGGAGGGCGCACTGAAAGTCAAGGAGCTGACGTACATGCACAGCGAAG GAATCCTGGCTGGAGAACTGAAACACGGACCACTGGCCCTGGTGGACAAG GAGATGCCCGTGCTGATGATCGTGCTGCGGGATCCGGTGTACACCAAGTG CATGAATGCACTGCAGCAGGTGACGTCCCGCAAGGGCAGACCGATCCTAA TCTGCGAGGAGGGCGACAACGAGACCATGTCCTTCTCCACGCGTTCGCTG CAGATCCCGAGGACCGTGGACTGCCTGCAGGGCGTGCTCACGGTGATTCC GCTCCAGCTGCTGTCCTACCACATCGCCGTGCTCCGCGGCTGCGACGTGG ACTGCCCCAGGAACCTGGCCAAGTCGGTGACCGTGGAGTAGGCGCCCCAA CTATCTGGCTAACTGGCTCGCACCGTCTCAAGAATTCCATTTTAGTATCT GCCTGAGAAAAACAAAACAAACCCTAGCACTTAAGTTAAAATTTTCTGGT ATTTTGTCGGATCAAAATCCGAACCCTTAACCCATTTGTGCTCCTTCTGG CTGAAGCCACATATGTTTAACCCCTACATTTGTAGCTGTACTGACCCTTT GTGTTGTGGACCCACTACTTTTTGTGAATGTGCAATTGAAATATAATTAT TTCCAGTTTTTCTCTAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gfat2-RA | 2773 | Gfat2-RA | 113..2631 | 1..2519 | 12580 | 99.9 | Plus |
Gfat1.f | 2352 | Gfat1.f | 1174..1613 | 1261..1700 | 865 | 79.7 | Plus |
Gfat1.d | 2385 | Gfat1.d | 1167..1606 | 1261..1700 | 865 | 79.7 | Plus |
Gfat1.f | 2352 | Gfat1.f | 1717..2001 | 1804..2088 | 540 | 79.2 | Plus |
Gfat1.d | 2385 | Gfat1.d | 1710..1994 | 1804..2088 | 540 | 79.2 | Plus |
Gfat1.f | 2352 | Gfat1.f | 1003..1133 | 1090..1220 | 370 | 85.4 | Plus |
Gfat1.d | 2385 | Gfat1.d | 996..1126 | 1090..1220 | 370 | 85.4 | Plus |
Gfat1.f | 2352 | Gfat1.f | 397..618 | 439..660 | 345 | 77 | Plus |
Gfat1.d | 2385 | Gfat1.d | 303..524 | 439..660 | 345 | 77 | Plus |
Gfat1.f | 2352 | Gfat1.f | 156..266 | 189..299 | 210 | 79.2 | Plus |
Gfat1.d | 2385 | Gfat1.d | 62..172 | 189..299 | 210 | 79.2 | Plus |
Gfat1.f | 2352 | Gfat1.f | 2026..2153 | 2113..2240 | 205 | 77.3 | Plus |
Gfat1.d | 2385 | Gfat1.d | 2019..2146 | 2113..2240 | 205 | 77.3 | Plus |
Gfat1.f | 2352 | Gfat1.f | 865..947 | 949..1031 | 190 | 81.9 | Plus |
Gfat1.d | 2385 | Gfat1.d | 858..940 | 949..1031 | 190 | 81.9 | Plus |
Gfat1.f | 2352 | Gfat1.f | 633..811 | 675..853 | 175 | 73.1 | Plus |
Gfat1.d | 2385 | Gfat1.d | 539..717 | 675..853 | 175 | 73.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 24160803..24162669 | 1866..1 | 9210 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 24159955..24160602 | 2513..1866 | 3210 | 99.7 | Minus |
chr3RHet | 2517486 | chr3RHet | 2480228..2480838 | 1090..1700 | 1150 | 79.2 | Plus |
chr3RHet | 2517486 | chr3RHet | 2481063..2481437 | 1866..2240 | 570 | 76.8 | Plus |
chr3RHet | 2517486 | chr3RHet | 2477243..2477657 | 439..853 | 455 | 74 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 28337870..28339735 | 1866..1 | 9330 | 100 | Minus |
3R | 32079331 | 3R | 28337015..28337668 | 2519..1866 | 3255 | 99.8 | Minus |
3R | 32079331 | 3R | 4136484..4137094 | 1090..1700 | 1150 | 79.2 | Plus |
3R | 32079331 | 3R | 4137319..4137693 | 1866..2240 | 570 | 76.8 | Plus |
3R | 32079331 | 3R | 4133499..4133913 | 439..853 | 455 | 74 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 28078701..28080566 | 1866..1 | 9330 | 100 | Minus |
3R | 31820162 | 3R | 28077846..28078499 | 2519..1866 | 3255 | 99.8 | Minus |
3R | 31820162 | 3R | 3798093..3798532 | 1261..1700 | 865 | 79.7 | Plus |
3R | 31820162 | 3R | 3798757..3798979 | 1866..2088 | 425 | 79.3 | Plus |
3R | 31820162 | 3R | 3797922..3798052 | 1090..1220 | 370 | 85.4 | Plus |
3R | 31820162 | 3R | 3794937..3795158 | 439..660 | 345 | 77 | Plus |
3R | 31820162 | 3R | 3799004..3799131 | 2113..2240 | 205 | 77.3 | Plus |
3R | 31820162 | 3R | 3794659..3794759 | 199..299 | 175 | 78.2 | Plus |
3R | 31820162 | 3R | 3795173..3795351 | 675..853 | 175 | 73.1 | Plus |
3R | 31820162 | 3R | 3796745..3796806 | 949..1010 | 175 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
transib2 | 2844 | transib2 TRANSIB2 2844bp | 318..405 | 2425..2512 | 133 | 65.6 | Plus |
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 1157..1261 | 1985..2089 | 128 | 64.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 24159953..24160601 | 1867..2515 | 99 | <- | Minus |
chr3R | 24160803..24162669 | 1..1866 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gfat2-RA | 1..2052 | 190..2241 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gfat2-RA | 1..2052 | 190..2241 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gfat2-RA | 1..2052 | 190..2241 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gfat2-RA | 1..2052 | 190..2241 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gfat2-RA | 34..2547 | 1..2515 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gfat2-RA | 34..2547 | 1..2515 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gfat2-RA | 31..2544 | 1..2515 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gfat2-RA | 34..2547 | 1..2515 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gfat2-RA | 31..2544 | 1..2515 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28337019..28337667 | 1867..2515 | 99 | <- | Minus |
3R | 28337870..28339735 | 1..1866 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28337019..28337667 | 1867..2515 | 99 | <- | Minus |
3R | 28337870..28339735 | 1..1866 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28337019..28337667 | 1867..2515 | 99 | <- | Minus |
3R | 28337870..28339735 | 1..1866 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 24162741..24163389 | 1867..2515 | 99 | <- | Minus |
arm_3R | 24163592..24165457 | 1..1866 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28077850..28078498 | 1867..2515 | 99 | <- | Minus |
3R | 28078701..28080566 | 1..1866 | 100 | Minus |
Translation from 189 to 2240
> GH12731.pep MCGIFAYLNYLTPKSRQEVLDLLLQGLKRLEYRGYDSTGIAIDALNSGEA QSIMLVKRTGKVKVLEDAVAEVCRGQDYSLPIDTHIGIAHTRWATHGVPS EVNSHPQRSDEDNSFVVVHNGIITNYKDVKTLLEKRGYVFESDTDTEVIA KLVHHLWQQHPGYTFGELVEQAIQQLEGAFAIAFKSKHFPGECVASRRGS PLLVGIKAKTKLATDHIPILYAKAHRPHGQPQQQAYQLLPPGDCNAEFQP LERKEVEYFFASDASAVIEHTNRVIYLEDDDVAAVKSDGTLSIHRLNKSS DDPHAREIITLKMEIQQIMKGNYDYFMLKEIFEQPESVVNTMRGRMRFDT QTVVLGGIKEYIPEIKRCRRLMLIACGTSYHSAVATRQLLEELTELPVMV ELASDFLDRNTPIFRDDVCFFISQSGETADTLMALRYCKQRGALIVGVTN TVGSSICRESHCGVHINAGPEIGVASTKAYTSQFISLVMFALVMSEDRLS LQQRRLEIIDGLSQLDEHIRTVLKLNSQVQQLAKELYEHKSLLIMGRGFN FATCLEGALKVKELTYMHSEGILAGELKHGPLALVDKEMPVLMIVLRDPV YTKCMNALQQVTSRKGRPILICEEGDNETMSFSTRSLQIPRTVDCLQGVL TVIPLQLLSYHIAVLRGCDVDCPRNLAKSVTVE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16128-PA | 684 | GF16128-PA | 1..684 | 1..683 | 3513 | 95.2 | Plus |
Dana\GF23135-PA | 682 | GF23135-PA | 1..682 | 1..683 | 3051 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12070-PA | 683 | GG12070-PA | 1..683 | 1..683 | 3612 | 98.2 | Plus |
Dere\GG12143-PA | 673 | GG12143-PA | 1..673 | 1..683 | 3037 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17445-PA | 698 | GH17445-PA | 1..698 | 1..683 | 3305 | 88.4 | Plus |
Dgri\GH20131-PA | 694 | GH20131-PA | 1..694 | 1..683 | 3071 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gfat2-PA | 683 | CG1345-PA | 1..683 | 1..683 | 3516 | 100 | Plus |
Gfat1-PH | 685 | CG12449-PH | 1..685 | 1..683 | 2924 | 82.6 | Plus |
Gfat1-PD | 673 | CG12449-PD | 1..673 | 1..683 | 2916 | 83.3 | Plus |
Gfat1-PA | 694 | CG12449-PA | 1..694 | 1..683 | 2916 | 81.6 | Plus |
Gfat1-PN | 694 | CG12449-PN | 1..694 | 1..683 | 2916 | 81.6 | Plus |
Gfat1-PL | 682 | CG12449-PL | 1..682 | 1..683 | 2910 | 82.8 | Plus |
Gfat1-PM | 665 | CG12449-PM | 1..665 | 1..683 | 2904 | 82.9 | Plus |
Gfat1-PJ | 643 | CG12449-PJ | 1..643 | 55..683 | 2709 | 81.9 | Plus |
Gfat1-PK | 493 | CG12449-PK | 27..493 | 208..683 | 2038 | 84.2 | Plus |
Gfat1-PF | 434 | CG12449-PF | 2..434 | 250..683 | 1996 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22771-PA | 683 | GI22771-PA | 1..683 | 1..683 | 3378 | 91.6 | Plus |
Dmoj\GI24373-PA | 694 | GI24373-PA | 1..694 | 1..683 | 3048 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23864-PA | 678 | GL23864-PA | 1..678 | 1..683 | 3348 | 91.8 | Plus |
Dper\GL12297-PA | 685 | GL12297-PA | 1..685 | 1..683 | 3048 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12297-PA | 678 | GA12297-PA | 1..678 | 1..683 | 3353 | 91.8 | Plus |
Dpse\GA26267-PA | 685 | GA26267-PA | 1..685 | 1..683 | 3048 | 83.2 | Plus |
Dpse\GA26267-PC | 685 | GA26267-PC | 1..685 | 1..683 | 3048 | 83.2 | Plus |
Dpse\GA26267-PD | 705 | GA26267-PD | 14..705 | 3..683 | 3027 | 82.1 | Plus |
Dpse\GA26267-PB | 434 | GA26267-PB | 2..434 | 250..683 | 2088 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16296-PA | 683 | GM16296-PA | 1..683 | 1..683 | 3656 | 99.6 | Plus |
Dsec\GM10731-PA | 694 | GM10731-PA | 1..694 | 1..683 | 3039 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18034-PA | 655 | GD18034-PA | 1..655 | 1..683 | 3460 | 95.3 | Plus |
Dsim\GD19703-PA | 470 | GD19703-PA | 16..470 | 226..683 | 2128 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22773-PA | 683 | GJ22773-PA | 1..683 | 1..683 | 3364 | 91.3 | Plus |
Dvir\GJ24380-PA | 685 | GJ24380-PA | 1..685 | 1..683 | 3081 | 83.6 | Plus |
Translation from 189 to 2240
> GH12731.hyp MCGIFAYLNYLTPKSRQEVLDLLLQGLKRLEYRGYDSTGIAIDALNSGEA QSIMLVKRTGKVKVLEDAVAEVCRGQDYSLPIDTHIGIAHTRWATHGVPS EVNSHPQRSDEDNSFVVVHNGIITNYKDVKTLLEKRGYVFESDTDTEVIA KLVHHLWQQHPGYTFGELVEQAIQQLEGAFAIAFKSKHFPGECVASRRGS PLLVGIKAKTKLATDHIPILYAKAHRPHGQPQQQAYQLLPPGDCNAEFQP LERKEVEYFFASDASAVIEHTNRVIYLEDDDVAAVKSDGTLSIHRLNKSS DDPHAREIITLKMEIQQIMKGNYDYFMLKEIFEQPESVVNTMRGRMRFDT QTVVLGGIKEYIPEIKRCRRLMLIACGTSYHSAVATRQLLEELTELPVMV ELASDFLDRNTPIFRDDVCFFISQSGETADTLMALRYCKQRGALIVGVTN TVGSSICRESHCGVHINAGPEIGVASTKAYTSQFISLVMFALVMSEDRLS LQQRRLEIIDGLSQLDEHIRTVLKLNSQVQQLAKELYEHKSLLIMGRGFN FATCLEGALKVKELTYMHSEGILAGELKHGPLALVDKEMPVLMIVLRDPV YTKCMNALQQVTSRKGRPILICEEGDNETMSFSTRSLQIPRTVDCLQGVL TVIPLQLLSYHIAVLRGCDVDCPRNLAKSVTVE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gfat2-PA | 683 | CG1345-PA | 1..683 | 1..683 | 3516 | 100 | Plus |
Gfat1-PH | 685 | CG12449-PH | 1..685 | 1..683 | 2924 | 82.6 | Plus |
Gfat1-PD | 673 | CG12449-PD | 1..673 | 1..683 | 2916 | 83.3 | Plus |
Gfat1-PA | 694 | CG12449-PA | 1..694 | 1..683 | 2916 | 81.6 | Plus |
Gfat1-PN | 694 | CG12449-PN | 1..694 | 1..683 | 2916 | 81.6 | Plus |