BDGP Sequence Production Resources |
Search the DGRC for GH12784
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 127 |
Well: | 84 |
Vector: | pOT2 |
Associated Gene/Transcript | Fer1HCH-RE |
Protein status: | GH12784.pep: gold |
Sequenced Size: | 1177 |
Gene | Date | Evidence |
---|---|---|
CG2216 | 2002-11-11 | Blastp of sequenced clone |
Fer1HCH | 2008-04-29 | Release 5.5 accounting |
Fer1HCH | 2008-08-15 | Release 5.9 accounting |
Fer1HCH | 2008-12-18 | 5.12 accounting |
1177 bp (1177 high quality bases) assembled on 2002-11-11
GenBank Submission: BT001419
> GH12784.complete AAAGGCCTTAGCTCCACTGAAAAATCAGATTAAAGCTGTCAGCAGAAGAC TACGTTCGACGATCAAAGATGGTGAAACTAATTGCTAGCCTGCTCCTGTT GGCCGTGGTGGCCCAGGCCTATGGAGATTTCAAGTGCTCCCTGGCTGTTC CTGAGATTACCAAGGACTGGGTGGACATGAAGGATGCCTGCATAAAGGGC ATGCGCAATCAGATCCAGGAGGAGATCAACGCCTCCTACCAGTACTTGGC CATGGGCGCCTACTTCTCCCGCGACACCGTCAACCGCCCTGGATTCGCCG AGCACTTCTTCAAGGCCGCCAAGGAGGAACGTGAGCACGGATCCAAGCTG GTGGAGTACCTGTCCATGCGCGGTCAACTGACCGAGGGAGTCAGCGATCT GATCAATGTGCCGGTAAGTCGACGACTCGCCTAGAAAACCCAAAAGCCCA GCTAATCCTGGCGAATCCCCCACAGACTGTGGCCAAGCAGGAGTGGACCG ATGGTGCCGCCGCCCTGTCCGACGCCCTCGACCTGGAGATCAAGGTGACC AAGTCCATCCGCAAGCTGATCCAGACCTGCGAGAACAAGCCCTACAACCA CTACCACCTGGTGGACTACCTGACCGGTGTCTATCTGGAGGAGCAGCTCC ACGGACAGCGCGAGCTCGCCGGCAAGCTGACCACTCTCAAGAAGATGATG GACACCAACGGCGAACTGGGCGAGTTCCTGTTCGACAAGACCCTGTAAGG AGGTGGAGATAGAGAAGGCGCAGCGCCCAGTCACGCATCAAAATTATCAG CCAGTCGAGTTATCTGTTATCTGTCAGCCCAGAGAGCCTTCCCGAGGGTC CGCTATTAAATCATCACCAGCCAAGTCGGCGACTGGCCAATAAATTATCC GTTCGACTGCGATCCTCAAACCAGCACAGCAAAATTCCACGTCTGTTCTT TCTTATCAACCACTTGTGATTTCCGTACACCTCGGGAGGGGGCTCCACAT TATGCAATCGCCGAGATTTCGCCTAGGCTTAAGTGGAATCGCTCATTCGC ATAGTAAGACACTCAGCACAACCCATTCAATACATCCTATATCTTTATAT TTTTCTGTCAATTAGACGAGCAAGTTCTTAAATAAATAACAATATATATG TAACGAAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fer1HCH-RE | 1464 | Fer1HCH-RE | 303..1464 | 1..1162 | 5810 | 100 | Plus |
Fer1HCH-RC | 1505 | Fer1HCH-RC | 807..1494 | 475..1162 | 3440 | 100 | Plus |
Fer1HCH-RD | 1465 | Fer1HCH-RD | 767..1454 | 475..1162 | 3440 | 100 | Plus |
Fer1HCH-RC | 1505 | Fer1HCH-RC | 440..807 | 46..413 | 1840 | 100 | Plus |
Fer1HCH-RD | 1465 | Fer1HCH-RD | 400..767 | 46..413 | 1840 | 100 | Plus |
Fer1HCH-RC | 1505 | Fer1HCH-RC | 303..350 | 1..48 | 240 | 100 | Plus |
Fer1HCH-RD | 1465 | Fer1HCH-RD | 303..350 | 1..48 | 240 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 26208098..26209121 | 1159..136 | 5075 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 26209987..26210078 | 136..45 | 460 | 100 | Minus |
chr3R | 27901430 | chr3R | 26210299..26210346 | 48..1 | 240 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 30385570..30386596 | 1162..136 | 5135 | 100 | Minus |
3R | 32079331 | 3R | 30387463..30387553 | 136..46 | 455 | 100 | Minus |
3R | 32079331 | 3R | 30387775..30387822 | 48..1 | 240 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 30126401..30127427 | 1162..136 | 5135 | 100 | Minus |
3R | 31820162 | 3R | 30128294..30128384 | 136..46 | 455 | 100 | Minus |
3R | 31820162 | 3R | 30128606..30128653 | 48..1 | 240 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
G3 | 4605 | G3 G3 4605bp | 639..682 | 8..52 | 114 | 75.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 26208098..26209121 | 136..1159 | 99 | <- | Minus |
chr3R | 26209988..26210074 | 49..135 | 100 | <- | Minus |
chr3R | 26210299..26210346 | 1..48 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fer1HCH-RC | 1..345 | 69..413 | 100 | == | Plus |
Fer1HCH-RC | 346..618 | 476..748 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fer1HCH-RC | 346..618 | 476..748 | 100 | Plus | |
Fer1HCH-RC | 1..345 | 69..413 | 100 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fer1HCH-RE | 1..366 | 69..434 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fer1HCH-RC | 1..345 | 69..413 | 100 | == | Plus |
Fer1HCH-RC | 346..618 | 476..748 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fer1HCH-RE | 1..366 | 69..434 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fer1HCH-RE | 303..1461 | 1..1159 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fer1HCH-RE | 303..1461 | 1..1159 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fer1HCH-RE | 39..1197 | 1..1159 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fer1HCH-RE | 303..1461 | 1..1159 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fer1HCH-RE | 39..1197 | 1..1159 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30385573..30386596 | 136..1159 | 100 | <- | Minus |
3R | 30387464..30387550 | 49..135 | 100 | <- | Minus |
3R | 30387775..30387822 | 1..48 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30385573..30386596 | 136..1159 | 100 | <- | Minus |
3R | 30387464..30387550 | 49..135 | 100 | <- | Minus |
3R | 30387775..30387822 | 1..48 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30385573..30386596 | 136..1159 | 100 | <- | Minus |
3R | 30387464..30387550 | 49..135 | 100 | <- | Minus |
3R | 30387775..30387822 | 1..48 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 26211295..26212318 | 136..1159 | 100 | <- | Minus |
arm_3R | 26213186..26213272 | 49..135 | 100 | <- | Minus |
arm_3R | 26213497..26213544 | 1..48 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30126404..30127427 | 136..1159 | 100 | <- | Minus |
3R | 30128295..30128381 | 49..135 | 100 | <- | Minus |
3R | 30128606..30128653 | 1..48 | 100 | Minus |
Translation from 68 to 433
> GH12784.hyp MVKLIASLLLLAVVAQAYGDFKCSLAVPEITKDWVDMKDACIKGMRNQIQ EEINASYQYLAMGAYFSRDTVNRPGFAEHFFKAAKEEREHGSKLVEYLSM RGQLTEGVSDLINVPVSRRLA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fer1HCH-PE | 121 | CG2216-PE | 1..121 | 1..121 | 614 | 100 | Plus |
Fer1HCH-PD | 205 | CG2216-PD | 1..115 | 1..115 | 588 | 100 | Plus |
Fer1HCH-PC | 205 | CG2216-PC | 1..115 | 1..115 | 588 | 100 | Plus |
Fer1HCH-PB | 205 | CG2216-PB | 1..115 | 1..115 | 588 | 100 | Plus |
Fer1HCH-PA | 205 | CG2216-PA | 1..115 | 1..115 | 588 | 100 | Plus |
Translation from 68 to 433
> GH12784.pep MVKLIASLLLLAVVAQAYGDFKCSLAVPEITKDWVDMKDACIKGMRNQIQ EEINASYQYLAMGAYFSRDTVNRPGFAEHFFKAAKEEREHGSKLVEYLSM RGQLTEGVSDLINVPVSRRLA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16185-PA | 205 | GF16185-PA | 1..116 | 1..116 | 528 | 81.9 | Plus |
Dana\GF20872-PA | 189 | GF20872-PA | 24..95 | 40..115 | 149 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11946-PA | 205 | GG11946-PA | 1..116 | 1..116 | 611 | 97.4 | Plus |
Dere\GG19524-PA | 189 | GG19524-PA | 23..87 | 40..104 | 152 | 43.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18415-PA | 212 | GH18415-PA | 1..119 | 1..115 | 421 | 68.1 | Plus |
Dgri\GH24547-PA | 190 | GH24547-PA | 25..86 | 41..102 | 137 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fer1HCH-PE | 121 | CG2216-PE | 1..121 | 1..121 | 614 | 100 | Plus |
Fer1HCH-PD | 205 | CG2216-PD | 1..115 | 1..115 | 588 | 100 | Plus |
Fer1HCH-PC | 205 | CG2216-PC | 1..115 | 1..115 | 588 | 100 | Plus |
Fer1HCH-PB | 205 | CG2216-PB | 1..115 | 1..115 | 588 | 100 | Plus |
Fer1HCH-PA | 205 | CG2216-PA | 1..115 | 1..115 | 588 | 100 | Plus |
Fer1HCH-PI | 245 | CG2216-PI | 1..155 | 1..115 | 537 | 74.2 | Plus |
Fer1HCH-PG | 242 | CG2216-PG | 1..152 | 1..115 | 530 | 75 | Plus |
Fer1HCH-PF | 242 | CG2216-PF | 1..152 | 1..115 | 530 | 75 | Plus |
Fer1HCH-PJ | 169 | CG2216-PJ | 1..79 | 37..115 | 409 | 100 | Plus |
Fer3HCH-PA | 186 | CG4349-PA | 23..87 | 40..104 | 156 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24318-PA | 194 | GI24318-PA | 1..103 | 14..116 | 366 | 67.3 | Plus |
Dmoj\GI16260-PA | 190 | GI16260-PA | 23..94 | 40..115 | 140 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14055-PA | 206 | GL14055-PA | 1..117 | 1..116 | 515 | 82.9 | Plus |
Dper\GL16490-PA | 194 | GL16490-PA | 24..89 | 40..105 | 148 | 40.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15307-PC | 206 | GA15307-PC | 1..117 | 1..116 | 515 | 82.9 | Plus |
Dpse\GA15307-PB | 206 | GA15307-PB | 1..117 | 1..116 | 515 | 82.9 | Plus |
Dpse\GA15307-PA | 206 | GA15307-PA | 1..117 | 1..116 | 515 | 82.9 | Plus |
Dpse\GA22605-PA | 273 | GA22605-PA | 103..168 | 40..105 | 148 | 40.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12162-PA | 205 | GM12162-PA | 1..116 | 1..116 | 606 | 96.6 | Plus |
Dsec\GM11516-PA | 186 | GM11516-PA | 23..94 | 40..115 | 160 | 42.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17157-PA | 205 | GD17157-PA | 1..116 | 1..116 | 610 | 97.4 | Plus |
Dsim\GD15908-PA | 186 | GD15908-PA | 23..94 | 40..115 | 160 | 42.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10402-PA | 212 | GJ10402-PA | 1..119 | 1..115 | 418 | 68.9 | Plus |
Dvir\GJ16902-PA | 193 | GJ16902-PA | 23..85 | 40..102 | 142 | 41.3 | Plus |