Clone GH12850 Report

Search the DGRC for GH12850

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:128
Well:50
Vector:pOT2
Associated Gene/TranscriptCG30121-RA
Protein status:GH12850.pep: wuzgold
Preliminary Size:2388
Sequenced Size:2320

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG30121 2001-09-19 Blastp of sequenced clone
CG30121 2003-01-01 Sim4 clustering to Release 3
CG30121 2008-04-29 Release 5.5 accounting
CG30121 2008-08-15 Release 5.9 accounting
CG30121 2008-12-18 5.12 accounting

Clone Sequence Records

GH12850.complete Sequence

2320 bp (2320 high quality bases) assembled on 2001-09-19

GenBank Submission: AY060285

> GH12850.complete
CTAGATAGCCAGCCGATCCCTTAAGTGTTTGGAATATCTGACAGTACAAC
TGAAAGAATCGATCAAACTGAGAAAGGTTTGGCAAAGCCCTGCCAGTTAA
ATATCGACAGAGTGAAAACTGCACGCCGGAAAAACAGCTCGAGGCAATCA
AATGCTGCCCCCTACTCTTTGCTTTTCCAGCTTTTCCTGCTGTTTTTGCT
CGTTTGTTAGCACGTTGGAAAAGCTTCGCTTGATAAGCATAAGAAATGGA
AGGCAACTAACAAGTGCGTTGGCTTGAGCGTGTGTGGGATTTTGGGTGTG
TGTGTGTGTGTGTGTGTGTGGCACAACGAACGACTGCACATAACAAGCTT
CCATTCTATCCCATTTATGCTGCTCCTTGGCAGCTGATAGGACAAACCGG
AGGCGCTATAACCGTAGCTGAACTCTGTTGCACTAGTCAAACTTAAGCCG
GAAATTCACTAAACATGGAACATTCACTTGCCTGCAATTGTATTTACTGC
TGGAGAAAACGAAAACAATTGCCGCAAATATGGCAAATGGCAATTGAAAA
ACAAAAGTCCCTGGCGAAACGAGACCAGAAATCCGTTCGCCTGCTGCTTT
CACACTTTCCAGCCACGCAGGACAAAAGGCCAAAAAAGCGGCAGCAGGGA
CGTGAGTGCTGAAAAAAAAGCCAAGGATGCAGCTGCACACAGAAGAAATG
AAAAAAATGGGGACGGAGTGTGGGAAAATGCACAAAATTGGCTGTGAAAT
GAACGAGATGAGGCGGCTATTGTTAACATCTGAGGGAATACAAGGGTAAT
AGCTATGACAGCAGCGAAACTGAGGTCAACACTTGGCTTTGCGTGCGCAA
AAGGCAGGCCAAAGTCAAACGGAAATCTGCATAAGACCCTCCAGTTGCGA
TTGACAGTCCTTGAGATGTTTCCACTCAGTTTCCCATGTCTGTGGCCTCT
GACAGAACCTGAACAGCAAACCGAGCACCAAAACATCGAACAGCTGGGTG
GGCAATTAAAAGGCATTCCAGAGGTCAGCATAAATTAGTCAAATGCGTGT
ATGCAAATGCCATTTGTGCGATTAACAATGCAGGCTTCAAGACCACTGAG
CACACTACGCACAAAAGACACACATTAAAGTTATCTGAAATTATATGGCA
AAAGGTAACACATGGATATATATATACAATATATGTATATATATTGCCGT
ACCTAGGGGAACTGACCTGGCTGCCTGGCAACTTTCCCATAATTTACACT
TTATCGAACGATAACAAACAACCTGCATAATGTATGGCTCTTGGTTTTGT
CCTGGACTCGTAAGGAATGGCAGCTCACCTGTGGGTGTGGGGTTGTGGGT
GGCATTCTGGCATTGACTGGCGCTTGAGGTTACCAAAAGGGTCCTGCGTG
AGATCCTTCTCGCCTTCTAAACAAAATTCCCGTATGCAAAATGTGCCGTC
AATCAAAAATGCCACAACTGCAACTCGTTGCACCTTTGGGCCAAGTCTAC
GGAGGACCTGTTAACCCACATTTACCAGGCGATTTGGCGACCTGGGAGAC
AAAAACCATTTACATTCGAAAACCATAAAAGATACAAACGCCGACCTTCT
CCGCTCGTTTGGGGAATATGGCATAATAAAATTTTAATTCGTTGCGATTG
ATGGTGGCCCCTCAAACGTAACCACCACATCCATATACGTATACATATAT
ACAAGCATCGATGGTTGATTTCCCAGAGCCGAGGGATACAACCAATACAT
TACATTTTATAACCCCAGCTAATTTGCATATATGCAGGCATACGTACGAC
CATAGAAATACGAGTATATGTGTCTGCGTAACATTGATTGGATTTGTTTG
ACTTTCACACTGCCTGATGGCATCGCATCGAAGATGGCTGGGGTTTTTCG
GCCTGGGATGGTGAAAGGTGGTTTTTAGGGCTTTCTGATGGTTTTTAGGC
GGTGGTGCGCTGGAAGGCTAAGTGCCTGACATTTACTAAATGGCAAAGGG
AACGGCTTCACAGGCTTTTGCTGGTTATACTTTCCCCATTTGCTCAACCG
AAAATTGCACTTGCCTCGTTAGTCGAAATGGCTGGGTAATTACGAGTGGT
CGGAATTGCCTCCCAACAACTCATCGCCTACTTGGCTTATAACCTTCAAA
GTTGCAGCTAACAAAGAAAAACTGGTCATGCCTTTTGGTATCCTTTAAAT
AGATAATGAACTTACAAGTTTGCACTTAGTAGATTGTTCAAGTATCTGTT
GATTATTATAATAGAGCTCAAATAAAGGTAATTCATACAATCAATCAGTA
AAAAAAAAAAAAAAAAAAAA

GH12850.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:23:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG30121-RA 2303 CG30121-RA 1..2300 1..2300 11500 100 Plus
CG33998-RA 652 CG33998-RA 580..652 2300..2228 365 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:15:30
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 14626237..14628076 2299..461 8940 99.2 Minus
chr2R 21145070 chr2R 14628303..14628764 460..1 2230 99.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:47:47 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:15:28
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18739130..18740969 2300..461 9200 100 Minus
2R 25286936 2R 18741199..18741658 460..1 2300 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:45:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 18740329..18742168 2300..461 9200 100 Minus
2R 25260384 2R 18742398..18742857 460..1 2300 100 Minus
Blast to na_te.dros performed on 2019-03-16 10:15:29 has no hits.

GH12850.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:16:08 Download gff for GH12850.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 14626237..14628076 461..2299 99 <- Minus
chr2R 14628303..14628764 1..460 94   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:39:04 Download gff for GH12850.complete
Subject Subject Range Query Range Percent Splice Strand
CG30121-RA 1..234 805..1038 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:07:56 Download gff for GH12850.complete
Subject Subject Range Query Range Percent Splice Strand
CG30121-RA 1..234 805..1038 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:38:43 Download gff for GH12850.complete
Subject Subject Range Query Range Percent Splice Strand
CG30121-RA 1..234 805..1038 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:58:11 Download gff for GH12850.complete
Subject Subject Range Query Range Percent Splice Strand
CG30121-RA 1..2299 1..2299 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:07:56 Download gff for GH12850.complete
Subject Subject Range Query Range Percent Splice Strand
CG30121-RA 1..2299 1..2299 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:38:43 Download gff for GH12850.complete
Subject Subject Range Query Range Percent Splice Strand
CG30121-RA 1..2299 1..2299 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:16:08 Download gff for GH12850.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18739131..18740969 461..2299 100 <- Minus
2R 18741199..18741658 1..460 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:16:08 Download gff for GH12850.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18739131..18740969 461..2299 100 <- Minus
2R 18741199..18741658 1..460 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:16:08 Download gff for GH12850.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18739131..18740969 461..2299 100 <- Minus
2R 18741199..18741658 1..460 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:59:00 Download gff for GH12850.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14626636..14628474 461..2299 100 <- Minus
arm_2R 14628704..14629163 1..460 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:59:00 Download gff for GH12850.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14626636..14628474 461..2299 100 <- Minus
arm_2R 14628704..14629163 1..460 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:59:00 Download gff for GH12850.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14626636..14628474 461..2299 100 <- Minus
arm_2R 14628704..14629163 1..460 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:16:06 Download gff for GH12850.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18740330..18742168 461..2299 100 <- Minus
2R 18742398..18742857 1..460 100   Minus

GH12850.hyp Sequence

Translation from 804 to 1037

> GH12850.hyp
MTAAKLRSTLGFACAKGRPKSNGNLHKTLQLRLTVLEMFPLSFPCLWPLT
EPEQQTEHQNIEQLGGQLKGIPEVSIN*
Sequence GH12850.hyp has no blast hits.

GH12850.pep Sequence

Translation from 804 to 1037

> GH12850.pep
MTAAKLRSTLGFACAKGRPKSNGNLHKTLQLRLTVLEMFPLSFPCLWPLT
EPEQQTEHQNIEQLGGQLKGIPEVSIN*

GH12850.pep Blast Records

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:01:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18115-PA 113 GE18115-PA 1..81 1..77 273 69 Plus