Clone GH12888 Report

Search the DGRC for GH12888

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:128
Well:88
Vector:pOT2
Associated Gene/TranscriptCenB1A-RC
Protein status:GH12888.pep: wuzgold
Preliminary Size:2835
Sequenced Size:3264

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6742 2001-01-01 Release 2 assignment
CG6742 2001-11-12 Blastp of sequenced clone
CG6742 2003-01-01 Sim4 clustering to Release 3
cenB1A 2008-04-29 Release 5.5 accounting
cenB1A 2008-08-15 Release 5.9 accounting
cenB1A 2008-12-18 5.12 accounting

Clone Sequence Records

GH12888.complete Sequence

3264 bp (3264 high quality bases) assembled on 2001-11-12

GenBank Submission: AY069114

> GH12888.complete
CTCTAGTAGAAAGTGAGACGTTTTAATTTGTTGTCTCTGCGCGCTGTGTA
AATTTGGTAAATTCGGCCCCGAATCGCGTAAATTGGCGAGTTTCGCTAAT
TAGGGCCAGTGCTCAACGTGTGTAGCCGTCGATTGCCAAGGATGCGACTA
ATCACCATATCTCCTGCTGCCCGCAATTAGCTTCTCCCAGAGCCGCCCTC
GAAAATCGCGCATCGAAATCCCCACTTCAGCAAGGAAAGCAAAGCAAAGC
AGAGCAGCAGCAACAGGCCAACAAAGATTCACGGGCCTCAATTAGCGTAG
CGAAATAGCCAGCAGTGCAGTCTAGGTGCTGCTTGCGTGGTGGCCAAAAT
GCGCGCCACCATCGAGTTCGAGGAGTGCCTGAAGGATTCTCCCAGATTCA
GACAATTTGTTTCCAAGGAGGAGAGCGACATCGAGCACTTGGAGCAGCGC
TTGGAGAAAATCATCAAGCTGTGCAATGTGGCCGTGGACTCGGGCAAGGA
GTATGTCAAGAACCAGAGCGCCTTTGCCATGTCCCTGTGGGATCTACAAC
AGCACTTTCTCGACAATAAGAACGCGCACAATGCGCTGGGCAAGCTGATT
CACTGCTTCCAGGAGATGAACAAGTTCCACACCATACTCTTGGATCAGGC
TAGCCGCACGGTGCTTAAAAATCTCAGTGTGTTCGTGAAGGACGACATTA
ACCAGGTGAAGGACTATAAGGGACATTTTCTCAAGGTTTCCGAAGGCTAT
GACAATGCGCTGATTAAAAACGCTCAGGCCAGCAAAAACCGACCGCAGGA
GATGCAGGAGGCTGCCAATATCCTTTCTGCCTCGAAATCGTGCTTCCAAC
ACACCGCTCTGGATTATGTCAACTATATAACGCTAGCGCAGGCTCGCAAG
GTCCCCTCAATACTATCCACGCTGTTGGATTACTATCAGGCGTGCGTGAC
CTATTACCACCAGGGCTTCGATCTGTGCAACGACTTCGACGAGTTCTTTA
AGAATATCAGCGAGGATTTGAACGCTTTGCGCGGTGACTATCAGCAGCTG
GAGAAGGCCATGCAGAATCGCCATATGAGCGTTAATCGCTACTGCGACTC
GAACACCAATAGCACGTCCAACAAGATCGAGGGCTACCTATTCAAGAAGA
AGTCCAAGGGCTTCAAGACCTGGTGCCGACGATGGTTCTACCTCAGCGAC
AACCAGCTCGTATATAGAAAACGCAGCAACGAGGACTCGTTCTCGGTCAT
GGAGGAGGATCTGCGCATCTGCAGCGTGCGCCCGGTAAACGAGGGTGACC
GCCGTTTCTGCTTCGAGGTCATCTCGCCGACCAAATCTCACATCCTGCAG
GCTGACTCCGCTGACATGCTTTCCCTGTGGATTTCCGCGCTACAGCACAG
CATCGGTGCTGCCATCCAGCATGACTCCACGCATCACTCGCGACCACAAT
CGACGAACGCACCCAATAATTCGCTGCCCGCAAAGCGTAGAATCCACTGG
GAAGAGTTCCTGAAGATACCGGGCAACGCATATTGTTGCGATTGCAGGAG
CCCCGAACCACGCTGGGCCTCCATTAACTTGGGCATCACCCTGTGCATCG
AGTGCTCCGGAGTGCACAGAAGCCTGGGTGTGCACTACAGCAAGGTGCGT
TCCCTGACGCTGGATGCCTGGGAGTCGGAGAACGTGAAGGTAATGATGGA
GCTCGGCAACGAGGTGGTTAACCGCATCTATGAGGCACGCATCGGCGATG
ATTGTGGGCTCAAAAAGCCCACGGAGCAGTGCGAGATCGGAGTGCGCGAG
GCTTGGATCAAGGCGAAGTACGTGGAGCGGCGGTTCGTCTGCGGTATGCC
CAAACCGCAGGAGCTGCTGGCCAGCGAGACAGCCGAAGTGCTGAGCATAG
ACAGTGGCGGCGTGGTAGAGGACGGCGAGAGTGGAGGCAGTGGTATCGCT
AAGCGAGCTACTCTGTCGCTGGGCGGCACGCGAAAGTGGGCGGTGAAGAA
ACTTCGACGAAGGCAGAAGCAGCGCTCGATCCCAAAAACGTTGAGCGATG
ATCCGAGCATCTATAACACAGCCAAAACCGGCGACGAGTTGGAAGATGAC
GATGATGATGAATCCATCAACATTCCCTCGATGTCACTAAGCATTTCACG
CGACGATTTGCTTGTGATCGGCGATGACCTGGCTCTTGACAGACTAGAGA
CTCCCGGCATTCTGGGCAGCGATCAAGAGAGCACCGATGGCGAGTCAGAT
GCGGAGTCGCCAGAGGAACTGCCCTTCTCCCAGCTAGACGCCAATCAATT
GCTGTACATGGCTTCGGTGGTGCACAATCTACCAGTGATGTGCATGGCCT
TCGCATTGGGTGCCGACAAGATGTGGAAAAATCCCCAAGACCGGCAACGA
TCGTTTCTGCACCAGGCCGTCATTTCCGGCTCCGTGATGGCCTGCGAGTT
TTTGCTACTAAACGGAGCCGCCATCGATGCTGTGGACGAGATGGGCTACA
GCGCCCTGCACATATCAACGGCCAAGGGTCACATCGCCCAAGTGTATTTG
CTGTTGAAGCATAAAGCTGCATACGACCTCTCCTCCAGTGACGGAAAGAA
GGCTCTGGACATTGCAGTGGACCAGGAAAACGCAGACATTGTAACGCTGT
GAACTCCGATTGACACAACTGAATGACGAGATTGGACCCAACGACGAGTA
CAATGGCGAAGATGAGACGTACAAGAACGTAATGAAGGACTTCTCCAAGT
TACCAGCCAGCCAGACGCGAGTTCTGCGCCAGCGGCACGACTCAAATACA
CTCGAATCGCAGCGCAGCTCGCTTACAAACTCCGACTAGCAGTGGCAGAA
GGGCCGCAAGAGTTAGGACCTTACTGGATATTATGGAATAATTTGTTCCA
ATTATTAGGATAGCGTGATATTGGATTGTTATTGGCTTTATAACGCATTA
ACCAGGAATGTTAAACGGTTTCGACCTCTAAGGATGTCGTTGCGGGCTTG
TTTCCCTTGGTAATCTCATTTGAAAAGCGCTTCCGATTATACAAGAAAAT
ATTATTCATTGCATTTGGCATTCGAATGGCAGGCACGATCGTTCGTTTTC
TCTTAGGCGCATTTTGAATCCGTTTTTGGCGATTAGCTTAAGTTTAAAGT
ATTCGTAGAGCAGTTGAGTTTATTAAAAATACGTATATTTGCCTATAAAA
TTGTACATCGTCTTATGTGGTATTTATTAAACGATATTGTAAAATGTAAA
AAAAAAAAAAAAAA

GH12888.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:56:25
Subject Length Description Subject Range Query Range Score Percent Strand
cenB1A-RC 3462 cenB1A-RC 39..3286 1..3248 16240 100 Plus
cenB1A-RA 3529 cenB1A-RA 107..3350 1..3248 16155 99.8 Plus
cenB1A-RB 2594 cenB1A-RB 385..2413 1216..3248 10080 99.8 Plus
cenB1A-RB 2594 cenB1A-RB 68..365 920..1217 1490 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:37:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 18945652..18946810 1494..2652 5735 99.7 Plus
chr3R 27901430 chr3R 18946862..18947456 2653..3247 2960 99.8 Plus
chr3R 27901430 chr3R 18941856..18942256 1..401 1945 99 Plus
chr3R 27901430 chr3R 18944754..18945050 921..1217 1470 99.7 Plus
chr3R 27901430 chr3R 18945432..18945590 1335..1493 795 100 Plus
chr3R 27901430 chr3R 18944029..18944200 607..778 785 97.1 Plus
chr3R 27901430 chr3R 18944257..18944403 775..921 720 99.3 Plus
chr3R 27901430 chr3R 18943682..18943801 399..518 600 100 Plus
chr3R 27901430 chr3R 18945244..18945362 1216..1334 565 98.3 Plus
chr3R 27901430 chr3R 18943877..18943973 517..613 470 99 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:47:55 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:37:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23122233..23123391 1494..2652 5795 100 Plus
3R 32079331 3R 23123443..23124038 2653..3248 2980 100 Plus
3R 32079331 3R 23118441..23118841 1..401 2005 100 Plus
3R 32079331 3R 23121336..23121632 921..1217 1485 100 Plus
3R 32079331 3R 23120611..23120782 607..778 860 100 Plus
3R 32079331 3R 23122013..23122171 1335..1493 795 100 Plus
3R 32079331 3R 23120839..23120985 775..921 735 100 Plus
3R 32079331 3R 23120264..23120383 399..518 600 100 Plus
3R 32079331 3R 23121826..23121944 1216..1334 595 100 Plus
3R 32079331 3R 23120459..23120555 517..613 485 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:21:45
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 22863064..22864222 1494..2652 5795 100 Plus
3R 31820162 3R 22864274..22864869 2653..3248 2980 100 Plus
3R 31820162 3R 22859272..22859672 1..401 2005 100 Plus
3R 31820162 3R 22862167..22862463 921..1217 1485 100 Plus
3R 31820162 3R 22861442..22861613 607..778 860 100 Plus
3R 31820162 3R 22862844..22863002 1335..1493 795 100 Plus
3R 31820162 3R 22861670..22861816 775..921 735 100 Plus
3R 31820162 3R 22861095..22861214 399..518 600 100 Plus
3R 31820162 3R 22862657..22862775 1216..1334 595 100 Plus
3R 31820162 3R 22861290..22861386 517..613 485 100 Plus
Blast to na_te.dros performed on 2019-03-15 12:37:50 has no hits.

GH12888.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:38:41 Download gff for GH12888.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 18945246..18945362 1218..1334 98 -> Plus
chr3R 18945432..18945590 1335..1493 100 -> Plus
chr3R 18941856..18942256 1..401 99 -> Plus
chr3R 18943685..18943801 402..518 100 -> Plus
chr3R 18943879..18943972 519..612 98 -> Plus
chr3R 18944035..18944199 613..777 96 -> Plus
chr3R 18944260..18944403 778..921 99 -> Plus
chr3R 18944755..18945050 922..1217 99 -> Plus
chr3R 18945652..18946810 1494..2652 99 -> Plus
chr3R 18946862..18947456 2653..3247 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:39:10 Download gff for GH12888.complete
Subject Subject Range Query Range Percent Splice Strand
cenB1A-RA 1..2487 349..2839 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:28:02 Download gff for GH12888.complete
Subject Subject Range Query Range Percent Splice Strand
cenB1A-RA 1..2487 349..2839 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:47:52 Download gff for GH12888.complete
Subject Subject Range Query Range Percent Splice Strand
CenB1A-RA 1..2487 349..2839 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:55:39 Download gff for GH12888.complete
Subject Subject Range Query Range Percent Splice Strand
cenB1A-RA 1..2487 349..2839 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:06:41 Download gff for GH12888.complete
Subject Subject Range Query Range Percent Splice Strand
CenB1A-RA 1..2487 349..2839 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:05:04 Download gff for GH12888.complete
Subject Subject Range Query Range Percent Splice Strand
cenB1A-RA 39..3281 1..3247 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:28:02 Download gff for GH12888.complete
Subject Subject Range Query Range Percent Splice Strand
cenB1A-RC 39..3285 1..3247 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:47:52 Download gff for GH12888.complete
Subject Subject Range Query Range Percent Splice Strand
CenB1A-RC 42..3288 1..3247 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:55:40 Download gff for GH12888.complete
Subject Subject Range Query Range Percent Splice Strand
cenB1A-RA 39..3281 1..3247 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:06:41 Download gff for GH12888.complete
Subject Subject Range Query Range Percent Splice Strand
CenB1A-RA 42..3284 1..3247 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:38:41 Download gff for GH12888.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23122013..23122171 1335..1493 100 -> Plus
3R 23118441..23118841 1..401 100 -> Plus
3R 23120267..23120383 402..518 100 -> Plus
3R 23120461..23120554 519..612 100 -> Plus
3R 23120617..23120781 613..777 100 -> Plus
3R 23120842..23120985 778..921 100 -> Plus
3R 23121337..23121632 922..1217 100 -> Plus
3R 23121828..23121944 1218..1334 100 -> Plus
3R 23122233..23123391 1494..2652 100 -> Plus
3R 23123443..23124037 2653..3247 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:38:41 Download gff for GH12888.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23122013..23122171 1335..1493 100 -> Plus
3R 23118441..23118841 1..401 100 -> Plus
3R 23120267..23120383 402..518 100 -> Plus
3R 23120461..23120554 519..612 100 -> Plus
3R 23120617..23120781 613..777 100 -> Plus
3R 23120842..23120985 778..921 100 -> Plus
3R 23121337..23121632 922..1217 100 -> Plus
3R 23121828..23121944 1218..1334 100 -> Plus
3R 23122233..23123391 1494..2652 100 -> Plus
3R 23123443..23124037 2653..3247 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:38:41 Download gff for GH12888.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23122013..23122171 1335..1493 100 -> Plus
3R 23118441..23118841 1..401 100 -> Plus
3R 23120267..23120383 402..518 100 -> Plus
3R 23120461..23120554 519..612 100 -> Plus
3R 23120617..23120781 613..777 100 -> Plus
3R 23120842..23120985 778..921 100 -> Plus
3R 23121337..23121632 922..1217 100 -> Plus
3R 23121828..23121944 1218..1334 100 -> Plus
3R 23122233..23123391 1494..2652 100 -> Plus
3R 23123443..23124037 2653..3247 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:47:52 Download gff for GH12888.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18944163..18944563 1..401 100 -> Plus
arm_3R 18945989..18946105 402..518 100 -> Plus
arm_3R 18946183..18946276 519..612 100 -> Plus
arm_3R 18946339..18946503 613..777 100 -> Plus
arm_3R 18946564..18946707 778..921 100 -> Plus
arm_3R 18947059..18947354 922..1217 100 -> Plus
arm_3R 18947550..18947666 1218..1334 100 -> Plus
arm_3R 18947735..18947893 1335..1493 100 -> Plus
arm_3R 18947955..18949113 1494..2652 100 -> Plus
arm_3R 18949165..18949759 2653..3247 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:31:42 Download gff for GH12888.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22861098..22861214 402..518 100 -> Plus
3R 22861292..22861385 519..612 100 -> Plus
3R 22861448..22861612 613..777 100 -> Plus
3R 22861673..22861816 778..921 100 -> Plus
3R 22859272..22859672 1..401 100 -> Plus
3R 22862168..22862463 922..1217 100 -> Plus
3R 22862659..22862775 1218..1334 100 -> Plus
3R 22862844..22863002 1335..1493 100 -> Plus
3R 22863064..22864222 1494..2652 100 -> Plus
3R 22864274..22864868 2653..3247 100   Plus

GH12888.pep Sequence

Translation from 348 to 2651

> GH12888.pep
MRATIEFEECLKDSPRFRQFVSKEESDIEHLEQRLEKIIKLCNVAVDSGK
EYVKNQSAFAMSLWDLQQHFLDNKNAHNALGKLIHCFQEMNKFHTILLDQ
ASRTVLKNLSVFVKDDINQVKDYKGHFLKVSEGYDNALIKNAQASKNRPQ
EMQEAANILSASKSCFQHTALDYVNYITLAQARKVPSILSTLLDYYQACV
TYYHQGFDLCNDFDEFFKNISEDLNALRGDYQQLEKAMQNRHMSVNRYCD
SNTNSTSNKIEGYLFKKKSKGFKTWCRRWFYLSDNQLVYRKRSNEDSFSV
MEEDLRICSVRPVNEGDRRFCFEVISPTKSHILQADSADMLSLWISALQH
SIGAAIQHDSTHHSRPQSTNAPNNSLPAKRRIHWEEFLKIPGNAYCCDCR
SPEPRWASINLGITLCIECSGVHRSLGVHYSKVRSLTLDAWESENVKVMM
ELGNEVVNRIYEARIGDDCGLKKPTEQCEIGVREAWIKAKYVERRFVCGM
PKPQELLASETAEVLSIDSGGVVEDGESGGSGIAKRATLSLGGTRKWAVK
KLRRRQKQRSIPKTLSDDPSIYNTAKTGDELEDDDDDESINIPSMSLSIS
RDDLLVIGDDLALDRLETPGILGSDQESTDGESDAESPEELPFSQLDANQ
LLYMASVVHNLPVMCMAFALGADKMWKNPQDRQRSFLHQAVISGSVMACE
FLLLNGAAIDAVDEMGYSALHISTAKGHIAQVYLLLKHKAAYDLSSSDGK
KALDIAVDQENADIVTL*

GH12888.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 10:35:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16981-PA 824 GF16981-PA 1..763 1..767 3706 91.5 Plus
Dana\GF11212-PA 1157 GF11212-PA 32..542 15..497 329 23.7 Plus
Dana\GF14267-PA 932 GF14267-PA 610..755 344..500 313 38.2 Plus
Dana\GF12215-PA 507 GF12215-PA 27..127 393..498 261 42.5 Plus
Dana\GF24981-PA 472 GF24981-PA 4..88 377..462 181 40.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:35:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11190-PA 828 GG11190-PA 1..767 1..767 4135 99.6 Plus
Dere\GG10676-PA 1155 GG10676-PA 32..540 15..497 331 24.2 Plus
Dere\GG23894-PA 927 GG23894-PA 605..750 344..500 315 37.6 Plus
Dere\GG23397-PA 513 GG23397-PA 30..130 393..498 262 42.5 Plus
Dere\GG13833-PA 466 GG13833-PA 4..101 377..477 184 38.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 10:35:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23954-PA 847 GH23954-PA 1..786 1..767 3683 89.5 Plus
Dgri\GH19987-PA 1157 GH19987-PA 32..549 15..497 319 23.6 Plus
Dgri\GH11124-PA 948 GH11124-PA 622..767 344..500 297 34.4 Plus
Dgri\GH23110-PA 533 GH23110-PA 34..134 393..498 267 43.4 Plus
Dgri\GH16066-PA 477 GH16066-PA 4..88 377..462 182 40.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:49:11
Subject Length Description Subject Range Query Range Score Percent Strand
CenB1A-PA 828 CG6742-PA 1..767 1..767 4003 100 Plus
CenB1A-PB 598 CG6742-PB 1..537 238..767 2751 98.7 Plus
Asap-PC 1127 CG30372-PC 32..540 15..497 340 24 Plus
Asap-PD 1143 CG30372-PD 32..540 15..497 340 24 Plus
Asap-PB 1155 CG30372-PB 32..540 15..497 340 24 Plus
CenG1A-PC 763 CG31811-PC 408..583 314..497 312 35.3 Plus
CenG1A-PA 927 CG31811-PA 572..747 314..497 312 35.3 Plus
CenG1A-PB 995 CG31811-PB 640..815 314..497 312 35.3 Plus
CG8243-PA 517 CG8243-PA 23..129 386..497 248 41.1 Plus
Graf-PJ 1016 CG8948-PJ 14..374 5..348 206 23.8 Plus
Graf-PA 1016 CG8948-PA 14..374 5..348 206 23.8 Plus
Graf-PE 1016 CG8948-PE 14..374 5..348 206 23.8 Plus
Graf-PD 1016 CG8948-PD 14..374 5..348 206 23.8 Plus
Graf-PI 1025 CG8948-PI 14..383 5..348 184 22.4 Plus
Graf-PH 1025 CG8948-PH 14..383 5..348 184 22.4 Plus
Graf-PG 1025 CG8948-PG 14..383 5..348 184 22.4 Plus
ArfGAP1-PB 448 CG4237-PB 4..88 377..462 176 40.7 Plus
ArfGAP1-PA 468 CG4237-PA 4..88 377..462 176 40.7 Plus
Git-PA 731 CG16728-PA 49..161 396..497 163 36.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 10:35:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23022-PA 832 GI23022-PA 1..771 1..767 3739 90.4 Plus
Dmoj\GI20274-PA 1170 GI20274-PA 32..542 15..497 332 24.1 Plus
Dmoj\GI12625-PA 949 GI12625-PA 626..771 344..500 316 36.3 Plus
Dmoj\GI18933-PA 517 GI18933-PA 34..134 393..498 263 43.4 Plus
Dmoj\GI12330-PA 475 GI12330-PA 4..88 377..462 180 40.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 10:35:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13665-PA 830 GL13665-PA 1..769 1..767 3770 93.1 Plus
Dper\GL17382-PA 1173 GL17382-PA 32..542 15..497 323 24.7 Plus
Dper\GL21243-PA 903 GL21243-PA 581..726 344..500 311 36.9 Plus
Dper\GL11678-PA 523 GL11678-PA 30..130 393..498 260 42.5 Plus
Dper\GL24958-PA 441 GL24958-PA 4..88 377..462 180 40.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 10:35:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19825-PA 830 GA19825-PA 1..769 1..767 3770 93.1 Plus
Dpse\GA15795-PA 1173 GA15795-PA 32..542 15..497 332 24.9 Plus
Dpse\GA16495-PA 960 GA16495-PA 638..783 344..500 312 37.6 Plus
Dpse\GA20924-PA 523 GA20924-PA 30..130 393..498 261 42.5 Plus
Dpse\GA18052-PA 466 GA18052-PA 4..88 377..462 182 40.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:35:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26489-PA 828 GM26489-PA 1..767 1..767 4123 99.5 Plus
Dsec\GM20723-PA 700 GM20723-PA 32..540 15..497 326 24 Plus
Dsec\GM21077-PA 432 GM21077-PA 30..128 393..494 243 43.3 Plus
Dsec\GM15341-PA 867 GM15341-PA 615..696 344..433 195 38.9 Plus
Dsec\GM24658-PA 471 GM24658-PA 4..88 377..462 181 40.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:35:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21002-PA 828 GD21002-PA 1..767 1..767 4147 99.9 Plus
Dsim\GD23935-PA 927 GD23935-PA 605..750 344..500 316 37.6 Plus
Dsim\GD10613-PA 542 GD10613-PA 30..130 393..498 261 42.5 Plus
Dsim\GD12722-PA 471 GD12722-PA 4..88 377..462 181 40.7 Plus
Dsim\GD25964-PA 695 GD25964-PA 13..125 396..497 172 36.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 10:35:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24615-PA 833 GJ24615-PA 1..772 1..767 3703 91.6 Plus
Dvir\GJ20227-PA 1163 GJ20227-PA 32..543 15..497 328 24.2 Plus
Dvir\GJ18155-PA 948 GJ18155-PA 627..772 344..500 303 36.3 Plus
Dvir\GJ21305-PA 520 GJ21305-PA 34..134 393..498 269 43.4 Plus
Dvir\GJ13268-PA 473 GJ13268-PA 4..88 377..462 180 40.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 10:35:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14415-PA 823 GK14415-PA 1..765 1..767 3700 91.7 Plus
Dwil\GK23159-PA 1157 GK23159-PA 32..540 15..497 324 23.6 Plus
Dwil\GK15018-PA 959 GK15018-PA 632..774 344..497 306 37.7 Plus
Dwil\GK22097-PA 533 GK22097-PA 32..132 393..498 258 42.5 Plus
Dwil\GK20569-PA 476 GK20569-PA 4..88 377..462 181 40.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:35:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10356-PA 828 GE10356-PA 1..767 1..767 4125 99.2 Plus
Dyak\GE23312-PA 1155 GE23312-PA 32..540 15..497 336 24.6 Plus
Dyak\GE18693-PA 927 GE18693-PA 605..750 344..500 316 37.6 Plus
Dyak\GE19238-PA 509 GE19238-PA 30..130 393..498 262 42.5 Plus
Dyak\GE20123-PA 469 GE20123-PA 4..101 377..477 185 38.6 Plus

GH12888.hyp Sequence

Translation from 348 to 2651

> GH12888.hyp
MRATIEFEECLKDSPRFRQFVSKEESDIEHLEQRLEKIIKLCNVAVDSGK
EYVKNQSAFAMSLWDLQQHFLDNKNAHNALGKLIHCFQEMNKFHTILLDQ
ASRTVLKNLSVFVKDDINQVKDYKGHFLKVSEGYDNALIKNAQASKNRPQ
EMQEAANILSASKSCFQHTALDYVNYITLAQARKVPSILSTLLDYYQACV
TYYHQGFDLCNDFDEFFKNISEDLNALRGDYQQLEKAMQNRHMSVNRYCD
SNTNSTSNKIEGYLFKKKSKGFKTWCRRWFYLSDNQLVYRKRSNEDSFSV
MEEDLRICSVRPVNEGDRRFCFEVISPTKSHILQADSADMLSLWISALQH
SIGAAIQHDSTHHSRPQSTNAPNNSLPAKRRIHWEEFLKIPGNAYCCDCR
SPEPRWASINLGITLCIECSGVHRSLGVHYSKVRSLTLDAWESENVKVMM
ELGNEVVNRIYEARIGDDCGLKKPTEQCEIGVREAWIKAKYVERRFVCGM
PKPQELLASETAEVLSIDSGGVVEDGESGGSGIAKRATLSLGGTRKWAVK
KLRRRQKQRSIPKTLSDDPSIYNTAKTGDELEDDDDDESINIPSMSLSIS
RDDLLVIGDDLALDRLETPGILGSDQESTDGESDAESPEELPFSQLDANQ
LLYMASVVHNLPVMCMAFALGADKMWKNPQDRQRSFLHQAVISGSVMACE
FLLLNGAAIDAVDEMGYSALHISTAKGHIAQVYLLLKHKAAYDLSSSDGK
KALDIAVDQENADIVTL*

GH12888.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:36:26
Subject Length Description Subject Range Query Range Score Percent Strand
CenB1A-PA 828 CG6742-PA 1..767 1..767 4003 100 Plus
CenB1A-PB 598 CG6742-PB 1..537 238..767 2751 98.7 Plus
Asap-PC 1127 CG30372-PC 32..540 15..497 340 24 Plus
Asap-PD 1143 CG30372-PD 32..540 15..497 340 24 Plus
Asap-PB 1155 CG30372-PB 32..540 15..497 340 24 Plus