BDGP Sequence Production Resources |
Search the DGRC for GH12946
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 129 |
Well: | 46 |
Vector: | pOT2 |
Associated Gene/Transcript | CG32548-RC |
Protein status: | GH12946.pep: gold |
Preliminary Size: | 1383 |
Sequenced Size: | 1407 |
Gene | Date | Evidence |
---|---|---|
CG6306 | 2001-01-01 | Release 2 assignment |
CG32548 | 2001-11-12 | Blastp of sequenced clone |
CG32548 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32548 | 2008-04-29 | Release 5.5 accounting |
CG32548 | 2008-08-15 | Release 5.9 accounting |
CG32548 | 2008-12-18 | 5.12 accounting |
1407 bp (1407 high quality bases) assembled on 2001-11-12
GenBank Submission: AY069115
> GH12946.complete CTCAGTCGGTTCAGATCGGTTCGTTTTACAATTTTTCCCGCTACAGACTT CGTAAACAAATTGTATCAAAATCTGAATTTGAAAATCAATTTTTGGCTAT CCACACTCGAGCTACACAACCTCTCGTCAAAACTTTTAAGTTTACATCGC GACAAACGGAACAACAGGGAATCATGAGATCCAGCAAAGTTCGTGGGGGC AACGCCAGTCGATTGGCTGACGCGGAGGGACAGTGGGGAAAGGGATGCCT GGGTTCCCAGCACTCAATTATCAAGAATCACGGGCGTGGCCTTTCATCCC AAACTCCCACGCAATTTGGTGGATTCTCGCCGTCGGGACAGCAGTATCCT GCCGTGTACTCGCAGCCAGGATTCCGGGCCGATGGTAAGCTGAAGGTCAC GCCCAACTCGCTGCTCCAGCAGCAGCAACAGCAGCAACAGCAGCAACAGC AGCAACAGCAGCAACAGCAGCAACAGCAGCAACAGCAGCTCCTGGCGCAG CAGCAGCAGCAACTCCTGGCCGCCACATCGCCGCAGGTAGCAGCTGCATC CGGACCAGGAGTGGGCGTTAGCGGTGGCGTGGTCAACATGCCCAGCTATG CGGACCAGATGCACGCCGCCTTCCTCGATTATCAGCGCCAACGAGCCGAG TTCGAGCAGCAGCAGCAGCACCTGCTGCAGAAGCTCTACCACTACTATCC CGATGTATCCGGCGGCCTAACATCACCGGCTCATCAGATTCAACCCCAAA CCCCCCAGATAGCTGCTCCCGCCGATGTGGGAGGCGCTCCGGCGGGCGTG GCAGCACAGAACGCAGCTGGCCGCTTCGCCTACCGTCGGCCGCAGTTCAG CAACAATGGCCTGCAGCCCGAGCGCCTTGCATCCGGATCCATTGTGCCCG GAGGTCCAGTAAGAGGAGGTCCAGTTGGAGTCATCCCGGGAGGAGTGATC GGATCAGCGCCTTTGCGCTCCAACAGTCTGGGAGGGGGAGCAAGTGGAGA CTTCTACTCCACGCAACAGCACATGGGCTTCATGCAGCAGCAGCAGCAGG ACGTGCTCCGTGACCAGCAGCAGTCGGTGGCCCATCAGTTCGCCACCAGC CAGTTGGCGCCCACCACCCGCCAGAGCTATGGGATGGCCGTTCCCATGTC CTCCGTGCTGGGATCCCCCACCTACCAGCAATCGCCGGACGTCTCTCATG TGAGCTTCTCAAGCGGCAATCTCAACTACAGCTTCTAATGATGATGAGCT GTTATTCCAAGGACTTCCAAAACTAGTATTTTCATTTTTTTTTCACACAC CTTTTTTTTTGCGTAAATTTTCGTGGTATTTGATAAGAGGAATTGTTTAG GGCAAGCAAGAATAAATTTTGTAAGTGATGATAAAAAAAAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6814..7102 | 410..686 | 298 | 59.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2409..2539 | 417..548 | 252 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6659..6924 | 394..673 | 203 | 56.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 18324886..18325757 | 512..1382 | 99 | == | Minus |
chrX | 18325853..18325969 | 300..416 | 100 | <- | Minus |
chrX | 18326170..18326468 | 1..299 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32548-RC | 1..1065 | 174..1238 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32548-RC | 1..1065 | 174..1238 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32548-RC | 1..1065 | 174..1238 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32548-RC | 1..1065 | 174..1238 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32548-RC | 1..1065 | 174..1238 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32548-RC | 1..1382 | 1..1382 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32548-RC | 1..1382 | 1..1382 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32548-RC | 1..1382 | 1..1382 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32548-RC | 1..1382 | 1..1382 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32548-RC | 1..1382 | 1..1382 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18435719..18436801 | 300..1382 | 100 | <- | Minus |
X | 18437002..18437300 | 1..299 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18435719..18436801 | 300..1382 | 100 | <- | Minus |
X | 18437002..18437300 | 1..299 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18435719..18436801 | 300..1382 | 100 | <- | Minus |
X | 18437002..18437300 | 1..299 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 18329752..18330834 | 300..1382 | 100 | <- | Minus |
arm_X | 18331035..18331333 | 1..299 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18445100..18445398 | 1..299 | 100 | Minus | |
X | 18443817..18444899 | 300..1382 | 100 | <- | Minus |
Translation from 2 to 1237
> GH12946.hyp QSVQIGSFYNFSRYRLRKQIVSKSEFENQFLAIHTRATQPLVKTFKFTSR QTEQQGIMRSSKVRGGNASRLADAEGQWGKGCLGSQHSIIKNHGRGLSSQ TPTQFGGFSPSGQQYPAVYSQPGFRADGKLKVTPNSLLQQQQQQQQQQQQ QQQQQQQQQQQQLLAQQQQQLLAATSPQVAAASGPGVGVSGGVVNMPSYA DQMHAAFLDYQRQRAEFEQQQQHLLQKLYHYYPDVSGGLTSPAHQIQPQT PQIAAPADVGGAPAGVAAQNAAGRFAYRRPQFSNNGLQPERLASGSIVPG GPVRGGPVGVIPGGVIGSAPLRSNSLGGGASGDFYSTQQHMGFMQQQQQD VLRDQQQSVAHQFATSQLAPTTRQSYGMAVPMSSVLGSPTYQQSPDVSHV SFSSGNLNYSF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32548-PC | 354 | CG32548-PC | 1..354 | 58..411 | 1833 | 100 | Plus |
CG32548-PB | 385 | CG32548-PB | 74..385 | 100..411 | 1612 | 100 | Plus |
ptip-PA | 2294 | CG32133-PA | 1158..1367 | 137..359 | 171 | 32.9 | Plus |
N-PB | 2703 | CG3936-PB | 2455..2647 | 42..247 | 169 | 29.2 | Plus |
N-PA | 2703 | CG3936-PA | 2455..2647 | 42..247 | 169 | 29.2 | Plus |
ptip-PA | 2294 | CG32133-PA | 229..346 | 139..257 | 167 | 40.5 | Plus |
ptip-PA | 2294 | CG32133-PA | 846..988 | 109..252 | 165 | 37.7 | Plus |
Translation from 173 to 1237
> GH12946.pep MRSSKVRGGNASRLADAEGQWGKGCLGSQHSIIKNHGRGLSSQTPTQFGG FSPSGQQYPAVYSQPGFRADGKLKVTPNSLLQQQQQQQQQQQQQQQQQQQ QQQQQLLAQQQQQLLAATSPQVAAASGPGVGVSGGVVNMPSYADQMHAAF LDYQRQRAEFEQQQQHLLQKLYHYYPDVSGGLTSPAHQIQPQTPQIAAPA DVGGAPAGVAAQNAAGRFAYRRPQFSNNGLQPERLASGSIVPGGPVRGGP VGVIPGGVIGSAPLRSNSLGGGASGDFYSTQQHMGFMQQQQQDVLRDQQQ SVAHQFATSQLAPTTRQSYGMAVPMSSVLGSPTYQQSPDVSHVSFSSGNL NYSF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22507-PA | 382 | GF22507-PA | 146..382 | 130..354 | 555 | 60.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18125-PA | 332 | GG18125-PA | 1..332 | 1..354 | 1082 | 72.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32548-PC | 354 | CG32548-PC | 1..354 | 1..354 | 1833 | 100 | Plus |
CG32548-PB | 385 | CG32548-PB | 74..385 | 43..354 | 1612 | 100 | Plus |
Ptip-PA | 2294 | CG32133-PA | 1158..1367 | 80..302 | 171 | 32.9 | Plus |
Ptip-PA | 2294 | CG32133-PA | 229..346 | 82..200 | 167 | 40.5 | Plus |
mam-PD | 1594 | CG8118-PD | 774..1047 | 56..300 | 167 | 29.6 | Plus |
mam-PB | 1594 | CG8118-PB | 774..1047 | 56..300 | 167 | 29.6 | Plus |
mam-PA | 1594 | CG8118-PA | 774..1047 | 56..300 | 167 | 29.6 | Plus |
Ptip-PA | 2294 | CG32133-PA | 846..988 | 52..195 | 165 | 37.7 | Plus |
Smr-PF | 3601 | CG4013-PF | 64..395 | 56..337 | 165 | 24.9 | Plus |
Smr-PE | 3601 | CG4013-PE | 64..395 | 56..337 | 165 | 24.9 | Plus |
Smr-PD | 3601 | CG4013-PD | 64..395 | 56..337 | 165 | 24.9 | Plus |
ec-PA | 1712 | CG2904-PA | 1417..1655 | 56..275 | 164 | 29 | Plus |
ec-PB | 1746 | CG2904-PB | 1451..1689 | 56..275 | 164 | 29 | Plus |
ec-PC | 1765 | CG2904-PC | 1470..1708 | 56..275 | 164 | 29 | Plus |
hdc-PC | 1080 | CG15532-PC | 732..819 | 82..169 | 163 | 49.4 | Plus |
CG10543-PD | 1631 | CG10543-PD | 1175..1395 | 78..314 | 162 | 29.2 | Plus |
CG10543-PE | 1634 | CG10543-PE | 1178..1398 | 78..314 | 162 | 29.2 | Plus |
CG10543-PA | 1634 | CG10543-PA | 1178..1398 | 78..314 | 162 | 29.2 | Plus |
CG10543-PF | 1635 | CG10543-PF | 1179..1399 | 78..314 | 162 | 29.2 | Plus |
N-PB | 2703 | CG3936-PB | 2502..2647 | 44..190 | 162 | 34 | Plus |
N-PA | 2703 | CG3936-PA | 2502..2647 | 44..190 | 162 | 34 | Plus |
corto-PD | 550 | CG2530-PD | 23..267 | 79..303 | 160 | 29.6 | Plus |
corto-PC | 550 | CG2530-PC | 23..267 | 79..303 | 160 | 29.6 | Plus |
corto-PB | 550 | CG2530-PB | 23..267 | 79..303 | 160 | 29.6 | Plus |
corto-PE | 550 | CG2530-PE | 23..267 | 79..303 | 160 | 29.6 | Plus |
corto-PA | 550 | CG2530-PA | 23..267 | 79..303 | 160 | 29.6 | Plus |
CG3638-PH | 1136 | CG3638-PH | 749..853 | 80..170 | 159 | 44.8 | Plus |
CG3638-PL | 1224 | CG3638-PL | 837..941 | 80..170 | 159 | 44.8 | Plus |
CG43689-PF | 1251 | CG43689-PF | 809..958 | 82..250 | 159 | 33.3 | Plus |
CG43689-PD | 1309 | CG43689-PD | 867..1016 | 82..250 | 159 | 33.3 | Plus |
CG43689-PC | 1332 | CG43689-PC | 890..1039 | 82..250 | 159 | 33.3 | Plus |
CG3638-PG | 1472 | CG3638-PG | 837..941 | 80..170 | 159 | 44.8 | Plus |
CG43689-PH | 1618 | CG43689-PH | 779..928 | 82..250 | 159 | 33.3 | Plus |
CG43689-PI | 1648 | CG43689-PI | 809..958 | 82..250 | 159 | 33.3 | Plus |
CG43689-PG | 1648 | CG43689-PG | 809..958 | 82..250 | 159 | 33.3 | Plus |
CG43689-PE | 1706 | CG43689-PE | 867..1016 | 82..250 | 159 | 33.3 | Plus |
nocte-PD | 2305 | CG17255-PD | 1528..1762 | 87..344 | 159 | 29.1 | Plus |
nocte-PB | 2309 | CG17255-PB | 1528..1762 | 87..344 | 159 | 29.1 | Plus |
nocte-PA | 2309 | CG17255-PA | 1528..1762 | 87..344 | 159 | 29.1 | Plus |
nocte-PC | 2309 | CG17255-PC | 1528..1762 | 87..344 | 159 | 29.1 | Plus |
Cdk8-PA | 454 | CG10572-PA | 350..450 | 59..174 | 156 | 37.9 | Plus |
nej-PE | 3266 | CG15319-PE | 668..977 | 52..321 | 156 | 29.5 | Plus |
nej-PB | 3276 | CG15319-PB | 668..977 | 52..321 | 156 | 29.5 | Plus |
nej-PD | 3276 | CG15319-PD | 668..977 | 52..321 | 156 | 29.5 | Plus |
nej-PC | 3282 | CG15319-PC | 674..983 | 52..321 | 156 | 29.5 | Plus |
CG43689-PF | 1251 | CG43689-PF | 534..751 | 75..303 | 155 | 31.5 | Plus |
CG43689-PD | 1309 | CG43689-PD | 592..809 | 75..303 | 155 | 31.5 | Plus |
CG43689-PC | 1332 | CG43689-PC | 615..832 | 75..303 | 155 | 31.5 | Plus |
CG43689-PH | 1618 | CG43689-PH | 504..721 | 75..303 | 155 | 31.5 | Plus |
CG43689-PI | 1648 | CG43689-PI | 534..751 | 75..303 | 155 | 31.5 | Plus |
CG43689-PG | 1648 | CG43689-PG | 534..751 | 75..303 | 155 | 31.5 | Plus |
CG43689-PE | 1706 | CG43689-PE | 592..809 | 75..303 | 155 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15593-PA | 368 | GI15593-PA | 286..368 | 272..354 | 263 | 66.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27035-PA | 373 | GL27035-PA | 81..373 | 43..354 | 501 | 52.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22322-PA | 364 | GA22322-PA | 144..364 | 120..354 | 494 | 56.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22817-PA | 341 | GM22817-PA | 1..341 | 1..354 | 1205 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15637-PA | 343 | GD15637-PA | 1..343 | 1..354 | 1167 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15199-PA | 362 | GJ15199-PA | 280..362 | 272..354 | 326 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25663-PA | 332 | GK25663-PA | 255..332 | 277..354 | 349 | 87.2 | Plus |
Dwil\GK25663-PA | 332 | GK25663-PA | 154..201 | 137..184 | 192 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15530-PA | 337 | GE15530-PA | 1..337 | 1..354 | 1090 | 75.1 | Plus |