BDGP Sequence Production Resources |
Search the DGRC for GH12970
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 129 |
Well: | 70 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9951-RA |
Protein status: | GH12970.pep: gold |
Preliminary Size: | 1828 |
Sequenced Size: | 1828 |
Gene | Date | Evidence |
---|---|---|
CG9951 | 2001-01-01 | Release 2 assignment |
CG9951 | 2001-09-19 | Blastp of sequenced clone |
CG9951 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9951 | 2008-04-29 | Release 5.5 accounting |
CG9951 | 2008-08-15 | Release 5.9 accounting |
CG9951 | 2008-12-18 | 5.12 accounting |
1828 bp (1828 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058359
> GH12970.complete CACAATTGGGTCACAAAAAAAACACTCCCATTAAAATGCGAAAATAAATA GTAAATAAAGCGAATCATGGACGAAGTGGACAAGATAATCATGCACCAGC TGCACCAGGTGGACGCGACCATCGAGCCGACGGATGAGCTGTCCGACTTC ACCCCGGAACAGGTGGTGCGAGCAGTCTCCGGCTGTCTGGCGGAGATTCG TCCAGACTTGCAGCTTCCACGCACTCTCCCCGGCGGAGCGATGGCCCAGC GCTTCGGAGTGGCCAGCTCCTTGGCGCAGGGTTGCAAGGATAGCGGTTAC CGAGGCGATATTGGTTATCAGACCTTTTTGTATCCCAATGCCGTGGAATT GCGGCGACTGCTAATGTTTCTCATCGAACAACTTCCGCGGGAGCGTCAAG GCACAGAGGACGGTGCCAGCAAGTCGCAAACCCTGAGCCACAGGCAACTC CTGGAGCGGAAGATCCGAAAGGAGCTCGCCCAACAACTGAAGACACCCTG GGTCCCACAGTTTGCCCGGTCCGTGGGCAATCGTAAATTACTCGGTTGCA GTAGCCTGGGCATTGAATTTCGACCAAACATCAATCTCAACATTCCATCC GCCAATCCCGAGGAGCGTTCCAAGGAGCAGCAGCAGTATCTCGACCAACA GGCACCCAATCTCTTCCAGCAAACATCCTCCACCTCGACGGATCTCATTG CCTCCGTGCTGCACAAGAATGAGCTGGACAGGTGGGGCCAGATATTGCCG GATTCAACACTTATCTTTGTGAGCAGCGAGGATCCAGCGCCGCCCCTGAT TCCGACCGTAAAACCGCCCGCCAGTGCGGAGAAGGAGGAGGAGCCTTCAC CCATCCAAGAACTGAGCGACCAAGTCCAGGAGTTGCGAGTCCAATGCGAA AACCTGCTAGCGGAACGCAAAGCACATGCTGTTGCCATTGCAGCTCTGAA ACAGCGGGAAACTAAAGCGAGAGAGGAGATCAGTCGCATTCAGCCCACGC TTAAACTGCACGAACGCACCTCCTTGGTTCTCGCCGATTCCGAGGAAAAC CTGGCCAAACTGGAGGCCCTGCTAAAATCCACGCAAAGCAAAAGGCTCAC GCTTACCCAGCAGTGGCAGGATTACAGGAAACCGCTGCTGGAAAGCCTAG AGAAACTAAAGACCGCCAAGGAGGCTCAGGAGGTCCAGGGCATTCGCAAC AGCATCGAGCAGCTGGAGCAGGAGCTTCTGGCCAAGACCCAACAGCACAA CGAACTTAATGCCACCCTGCGTAGCGCCAGTCAGTCCTTGGCACCTCGCA AGGAGTACACCCGCAGGATACATGAATTCATCGGGAACATACGCAAGCAA CGAGCGGATATCTACAAAGTTCTGGATGACACGCGACAACTCCAAAAGCA GCTTAATGTCGTGGGTGCCCAGTTGCAGCGCCAGTTCAACTACACGGACG ACCTGCTCTTCCAGAGCGCCAAGCATGATCTCCACGCGAAGCGGGCCTAC AAGCTACTGGCCCAACTGCACGCCAATTGCAATGAGCTGGTCGAGTGCGT CTCCCTCACGGGAAACGTGACCAAGCAGATCCGCGAACTTGAGGTCCAAA TCGATGGGGAGAAACTGAAGAACGTGCTGACCAGTCTGCAGCAGATCACC GGCGATATCCAGAAGTTCGAGCAGCATATCCAGGAGCTCCAGGAGCAAAT ACGTGCCGTGGAGCAGACGAACGCAGGGAGTTAGTTACGCGGAATCACTT GTTTACCAGTGCCAATCACAATAAACGAATTGATGCACGCCAAGCGTTCA TTTTATTAGTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9951-RA | 1826 | CG9951-RA | 17..1826 | 1..1810 | 9050 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 16852672..16854481 | 1..1810 | 9035 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 16863180..16864999 | 1..1820 | 9085 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 16856280..16858099 | 1..1820 | 9085 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16852672..16854481 | 1..1810 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9951-RA | 1..1668 | 67..1734 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9951-RA | 1..1668 | 67..1734 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9951-RA | 1..1668 | 67..1734 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9951-RA | 1..1668 | 67..1734 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9951-RA | 1..1668 | 67..1734 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9951-RA | 17..1826 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9951-RA | 17..1826 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9951-RA | 17..1826 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9951-RA | 19..1828 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9951-RA | 17..1826 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16863180..16864989 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16863180..16864989 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16863180..16864989 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16856280..16858089 | 1..1810 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16856280..16858089 | 1..1810 | 100 | Plus |
Translation from 66 to 1733
> GH12970.pep MDEVDKIIMHQLHQVDATIEPTDELSDFTPEQVVRAVSGCLAEIRPDLQL PRTLPGGAMAQRFGVASSLAQGCKDSGYRGDIGYQTFLYPNAVELRRLLM FLIEQLPRERQGTEDGASKSQTLSHRQLLERKIRKELAQQLKTPWVPQFA RSVGNRKLLGCSSLGIEFRPNINLNIPSANPEERSKEQQQYLDQQAPNLF QQTSSTSTDLIASVLHKNELDRWGQILPDSTLIFVSSEDPAPPLIPTVKP PASAEKEEEPSPIQELSDQVQELRVQCENLLAERKAHAVAIAALKQRETK AREEISRIQPTLKLHERTSLVLADSEENLAKLEALLKSTQSKRLTLTQQW QDYRKPLLESLEKLKTAKEAQEVQGIRNSIEQLEQELLAKTQQHNELNAT LRSASQSLAPRKEYTRRIHEFIGNIRKQRADIYKVLDDTRQLQKQLNVVG AQLQRQFNYTDDLLFQSAKHDLHAKRAYKLLAQLHANCNELVECVSLTGN VTKQIRELEVQIDGEKLKNVLTSLQQITGDIQKFEQHIQELQEQIRAVEQ TNAGS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23941-PA | 556 | GF23941-PA | 1..556 | 1..555 | 2371 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13587-PA | 553 | GG13587-PA | 1..553 | 1..555 | 2752 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16599-PA | 554 | GH16599-PA | 1..548 | 1..549 | 1937 | 68.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9951-PA | 555 | CG9951-PA | 1..555 | 1..555 | 2793 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12445-PA | 558 | GI12445-PA | 1..552 | 1..549 | 1927 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20854-PA | 553 | GL20854-PA | 1..547 | 1..549 | 2180 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22148-PA | 553 | GA22148-PA | 1..547 | 1..549 | 2180 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25667-PA | 554 | GM25667-PA | 1..554 | 1..555 | 2800 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14674-PA | 554 | GD14674-PA | 1..554 | 1..555 | 2849 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12344-PA | 551 | GJ12344-PA | 1..545 | 1..549 | 1951 | 69.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20894-PA | 571 | GK20894-PA | 1..565 | 1..549 | 1879 | 66.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19884-PA | 554 | GE19884-PA | 1..554 | 1..555 | 2749 | 94.6 | Plus |
Translation from 66 to 1733
> GH12970.hyp MDEVDKIIMHQLHQVDATIEPTDELSDFTPEQVVRAVSGCLAEIRPDLQL PRTLPGGAMAQRFGVASSLAQGCKDSGYRGDIGYQTFLYPNAVELRRLLM FLIEQLPRERQGTEDGASKSQTLSHRQLLERKIRKELAQQLKTPWVPQFA RSVGNRKLLGCSSLGIEFRPNINLNIPSANPEERSKEQQQYLDQQAPNLF QQTSSTSTDLIASVLHKNELDRWGQILPDSTLIFVSSEDPAPPLIPTVKP PASAEKEEEPSPIQELSDQVQELRVQCENLLAERKAHAVAIAALKQRETK AREEISRIQPTLKLHERTSLVLADSEENLAKLEALLKSTQSKRLTLTQQW QDYRKPLLESLEKLKTAKEAQEVQGIRNSIEQLEQELLAKTQQHNELNAT LRSASQSLAPRKEYTRRIHEFIGNIRKQRADIYKVLDDTRQLQKQLNVVG AQLQRQFNYTDDLLFQSAKHDLHAKRAYKLLAQLHANCNELVECVSLTGN VTKQIRELEVQIDGEKLKNVLTSLQQITGDIQKFEQHIQELQEQIRAVEQ TNAGS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9951-PA | 555 | CG9951-PA | 1..555 | 1..555 | 2793 | 100 | Plus |