Clone GH12991 Report

Search the DGRC for GH12991

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:129
Well:91
Vector:pOT2
Associated Gene/TranscriptCG11594-RB
Protein status:GH12991.pep: wuzgold
Preliminary Size:2688
Sequenced Size:2858

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11594 2001-01-01 Release 2 assignment
CG11594 2001-07-04 Blastp of sequenced clone
CG11594 2008-04-29 Release 5.5 accounting
CG11594 2008-08-15 Release 5.9 accounting
CG11594 2008-12-18 5.12 accounting

Clone Sequence Records

GH12991.complete Sequence

2858 bp (2858 high quality bases) assembled on 2001-07-04

GenBank Submission: AY060286

> GH12991.complete
CTCGTTGCGACTGGTTGTGCGACAGGTGTCGGAATAAATAAAAGCAAAAA
CATTCGACGGCTTTTGTTTGCGCTGATAAACAACCTGCGCATATGTACAA
GCAAAGCAAAATACTGCTCGAATAATTGTTTGTTCAAAACAATCAGGTGT
GCCTTTTATAAAACTAAAAGTTTCTAATTTCTAAACGAGTAGGTGTGCGC
GCTTCTAATAAAAAATTTCGGTATTAAAAATTAAGTTGTTTTAAAATTAA
ATGCTCTTCAGCTTTTTAAGATGCAGCAGAACTATTGTGCTAAAGAAAAT
AAACAAGCACAAATCACAAATTACGGTAAATGCAAAAATATAAACAAAAA
CGTGCCTGAAAGATACGGGGTTACTGCGATCGTGGTTTAAATAAAATCAA
AAGATACAAAACCATAGCGATACAATACAGATGCAGATACATGTGCGTCT
GTGGAGTTTGGAAAATCAAAAATTATACCAAAAATAAACCATAATTGATA
TAAAAAAAGCTTATCATCATTTTTCTATATTTATTGCCTCTGACAATTGT
CGATAACAATTAAGAATATAAATATCTCACTTCTTCTGTGGCAAATTAAG
ATATTTCATAACTGTAACTCAATTATAAGTAATCAAATGAGATCTTTAGA
AACCGGTACTTGGGTTAATTTACACAGTTTCTAGCTGTACAGGGTCTCTA
GGCGTTCGCATATCAGGTTGCTTATCAGTTCGCGTCCGACGCTCGACGAC
TTCGCTTCGCTTTTGGTCTGGGATTGGGTTTGGGTTTTCGCATCGAGCCA
ATAACATTTATTTGACCGCCAAGGTGATTAGAGGCGTCTGTGACGGAGAC
GGCGACTTGGAAATGTCATCCGGACCGTTTTTTGTGGGCGTGGACGTGGG
CACGGGCAGTGCGAGGGCGGCCCTGGTCGCCTGCGATGGGCGTGTCCTGG
AGCAGGCGGTGCAGACGATCCAAACGTGGAATCCTGAGCCGGGCTACTAC
AACCAGTCATCCGATAATATATGGCAGTCCATCTGCCAGGTGGTGAAGGT
AGGCAAAGTTGTTCTTATACATAAAATAGTACCATTAACTATATTTAATT
ATATTCATATTTCGAAATGCATTGAGAATTTTTAAAATGAAATGACTCTA
AAAATAATAATTTAACGACTTTAATTTGGGTCTATAAACCCAGTAATGAT
CTTCCCCCATTTGCTCTGTGCGATAACCTCTGTCGTTCGGCGACGTTTCT
CGCGAAGATTAGATTAACCCAGTGCCGATTTTACAGAAAGTCATTGGCGG
CGTCGATAAGTCAAAAGTCAAGGGCATTGGCTTCGATGCCACCTGCTCCT
TGGTGGTTCTGGGCCCCCAGGGATCGCCGCTGACGGTGAGCAAGTCCGGT
GAGGCGGAGCAGAACATAATCCTCTGGATGGACCATCGTGCCGAGCAGGA
AACCCAAGAGATCAATGCCTTCAAACACTCGCTGCTGAAATATGTGGGTG
GTCAGGTTTCGCTGGAAATGGAGGTTCCCAAATTGCTGTGGCTGAAGAGG
AATCTGTCACAGACTTTTGGAAATATTTGGAGGGTCTTTGACCTGCCCGA
CTTTCTGACCTGGCGAGCCACTGGAGTGGACACCCGATCACTTTGCTCGG
TGGTGTGCAAGTGGAACTACGATGCAGCGAATGGCAGTTGGAACAAGGAG
TTCCTGAAGCAGGCGGACTTGGAGGAGTTGACACAGAATAACTTCGAGAA
ATTGGGCAGTGATGTCCAGCCGCCTGGCCGAACGGTGGGCAAAGGACTCA
CGGCCAAGGCTGCTGGGGAACTGGGCTTATCCGCCGGCACTGTGGTGAGC
ACCTCCCTAATCGATGCCCATGCTGGCGCCTTGGGAATGTTTGGATGCCG
CTCAAAGGAGTCCAAGGGTGCCGACGATGTCCAGGGTAAAATGGCTCTGA
TTGCCGGTACATCCACCTGCCACATGAGCATCACCCGGAAGGCATGCTTC
GCACAAGGTGTTTGGGGTCCCTATCAGGATGCCATTATTCCCGGCTACTT
CCTAAACGAGGGTGGTCAGAGCATCGCAGGACATCTCCTAGATCACGTCC
TCAAGTCGCATGAATCCTACGCCGAACTGAAATCCCAATTGGGAGAGGAT
AAGTTTATCTACCAGCATCTTAATAAGTTGCTGCCGGAACTGGCAGCAGC
TCGAGGATTAAGCCAGGTGGGCTGTCTCACCCAGGATGTCCATGTCTGGC
CGGACTTGCATGGCAATCGGTCGCCCATCGCAGATCCCACGCTGCGAGGA
GTGATTACTGGACTGGACATGACGCGAGGAACTGAATCTCTGGCCATCAA
ATACTTGGCGTTCGTCCAAGCTCTGGCTTACGGCACACGTCACATTATTG
AAAACCTTTACCAGTACGGTAGAGCTCCCTTTCAAACGCTACTTTTCTGC
GGGGGATTGGCCAAGAATCCTCTGTACGTACAATGTCATGCGGACATTTG
CAATCTGCCCGCACTGATTCCGGATGAACAGGAAATGGTTCTGGTGGGCG
CTGCTGCCTTGGGAGCCGCTGCCTCCGGCCACTTCGACAGCTTGGAGAGC
GCCTCGAAATCCATGGGTGGCACTGGCCAGCTGGTGAAGCCGAACGCGGA
AACGCTTGAGTTCCACAATCGCAAGTACAAGGTGTTCCTGCAGCTGCTGG
AGAACCAACGACAGTACAGGCGCATTATGCAGGCAGACACAAAGTGATTT
TTTTTCATTCCGATGTCAAGACTTTCAATAATTTTAAATAAATGCCGTAC
ATGAGCATTGTAACAAATAAAAAGTTTGGCGCACACAGGTAAAAAAAAAA
AAAAAAAA

GH12991.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:36:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG11594-RB 2908 CG11594-RB 18..2858 1..2841 14190 99.9 Plus
CG11594-RA 2670 CG11594-RA 1064..2620 1285..2841 7770 99.9 Plus
CG11594.a 2125 CG11594.a 566..2122 1285..2841 7770 99.9 Plus
CG11594-RA 2670 CG11594-RA 18..1065 1..1048 5240 100 Plus
CG11594.a 2125 CG11594.a 18..344 1..327 1635 100 Plus
CG11594.a 2125 CG11594.a 342..567 823..1048 1130 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:08:06
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 4023076..4025378 2303..1 11485 99.9 Minus
chr3L 24539361 chr3L 4022360..4022604 2840..2596 1225 100 Minus
chr3L 24539361 chr3L 4022662..4022880 2597..2379 1095 100 Minus
chr3L 24539361 chr3L 4022939..4023014 2378..2303 380 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:48:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:08:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4023690..4025992 2303..1 11500 100 Minus
3L 28110227 3L 4022973..4023218 2841..2596 1230 100 Minus
3L 28110227 3L 4023276..4023494 2597..2379 1095 100 Minus
3L 28110227 3L 4023553..4023628 2378..2303 380 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:58:17
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 4023690..4025992 2303..1 11500 99.9 Minus
3L 28103327 3L 4022973..4023218 2841..2596 1230 100 Minus
3L 28103327 3L 4023276..4023494 2597..2379 1095 100 Minus
3L 28103327 3L 4023553..4023628 2378..2303 380 100 Minus
Blast to na_te.dros performed 2019-03-15 18:08:04
Subject Length Description Subject Range Query Range Score Percent Strand
I-element 5371 I-element DMIFACA 5371bp Derived from M14954 (g157749) (Rel. 44, Last updated, Version 2). 5119..5299 457..634 150 56.8 Plus
accord2 7650 accord2 QBERT 7650bp 948..1023 521..595 116 63.2 Plus

GH12991.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:09:15 Download gff for GH12991.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 4022360..4022602 2598..2840 100 <- Minus
chr3L 4022662..4022880 2379..2597 100 <- Minus
chr3L 4022939..4023013 2304..2378 100 <- Minus
chr3L 4023076..4025378 1..2303 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:39:26 Download gff for GH12991.complete
Subject Subject Range Query Range Percent Splice Strand
CG11594-RC 185..1647 1285..2747 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:27:34 Download gff for GH12991.complete
Subject Subject Range Query Range Percent Splice Strand
CG11594-RC 185..1647 1285..2747 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:53:27 Download gff for GH12991.complete
Subject Subject Range Query Range Percent Splice Strand
CG11594-RC 185..1647 1285..2747 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:00:50 Download gff for GH12991.complete
Subject Subject Range Query Range Percent Splice Strand
CG11594-RC 185..1647 1285..2747 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:53:21 Download gff for GH12991.complete
Subject Subject Range Query Range Percent Splice Strand
CG11594-RC 185..1647 1285..2747 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:27:07 Download gff for GH12991.complete
Subject Subject Range Query Range Percent Splice Strand
CG11594-RB 18..2857 1..2840 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:27:34 Download gff for GH12991.complete
Subject Subject Range Query Range Percent Splice Strand
CG11594-RB 18..2857 1..2840 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:53:27 Download gff for GH12991.complete
Subject Subject Range Query Range Percent Splice Strand
CG11594-RC 389..1944 1285..2840 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:00:50 Download gff for GH12991.complete
Subject Subject Range Query Range Percent Splice Strand
CG11594-RB 18..2857 1..2840 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:53:21 Download gff for GH12991.complete
Subject Subject Range Query Range Percent Splice Strand
CG11594-RC 389..1944 1285..2840 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:09:15 Download gff for GH12991.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4022974..4023216 2598..2840 100 <- Minus
3L 4023276..4023494 2379..2597 100 <- Minus
3L 4023553..4023627 2304..2378 100 <- Minus
3L 4023690..4025992 1..2303 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:09:15 Download gff for GH12991.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4022974..4023216 2598..2840 100 <- Minus
3L 4023276..4023494 2379..2597 100 <- Minus
3L 4023553..4023627 2304..2378 100 <- Minus
3L 4023690..4025992 1..2303 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:09:15 Download gff for GH12991.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4022974..4023216 2598..2840 100 <- Minus
3L 4023276..4023494 2379..2597 100 <- Minus
3L 4023553..4023627 2304..2378 100 <- Minus
3L 4023690..4025992 1..2303 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:53:27 Download gff for GH12991.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4023690..4025992 1..2303 99   Minus
arm_3L 4022974..4023216 2598..2840 100 <- Minus
arm_3L 4023276..4023494 2379..2597 100 <- Minus
arm_3L 4023553..4023627 2304..2378 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:38:42 Download gff for GH12991.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4022974..4023216 2598..2840 100 <- Minus
3L 4023276..4023494 2379..2597 100 <- Minus
3L 4023553..4023627 2304..2378 100 <- Minus
3L 4023690..4025992 1..2303 99   Minus

GH12991.pep Sequence

Translation from 1427 to 2746

> GH12991.pep
MDHRAEQETQEINAFKHSLLKYVGGQVSLEMEVPKLLWLKRNLSQTFGNI
WRVFDLPDFLTWRATGVDTRSLCSVVCKWNYDAANGSWNKEFLKQADLEE
LTQNNFEKLGSDVQPPGRTVGKGLTAKAAGELGLSAGTVVSTSLIDAHAG
ALGMFGCRSKESKGADDVQGKMALIAGTSTCHMSITRKACFAQGVWGPYQ
DAIIPGYFLNEGGQSIAGHLLDHVLKSHESYAELKSQLGEDKFIYQHLNK
LLPELAAARGLSQVGCLTQDVHVWPDLHGNRSPIADPTLRGVITGLDMTR
GTESLAIKYLAFVQALAYGTRHIIENLYQYGRAPFQTLLFCGGLAKNPLY
VQCHADICNLPALIPDEQEMVLVGAAALGAAASGHFDSLESASKSMGGTG
QLVKPNAETLEFHNRKYKVFLQLLENQRQYRRIMQADTK*

GH12991.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:07:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24780-PA 548 GF24780-PA 112..548 1..437 2031 87 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:07:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14228-PA 548 GG14228-PA 110..548 1..439 2286 96.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:07:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16469-PA 548 GH16469-PA 110..547 1..438 1921 82.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG11594-PE 548 CG11594-PE 110..548 1..439 2304 100 Plus
CG11594-PD 548 CG11594-PD 110..548 1..439 2304 100 Plus
CG11594-PC 548 CG11594-PC 110..548 1..439 2304 100 Plus
CG11594-PA 548 CG11594-PA 110..548 1..439 2304 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:07:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12141-PA 546 GI12141-PA 110..545 1..438 1665 68.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:07:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16197-PA 493 GL16197-PA 113..493 1..439 1605 73.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:07:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11088-PA 551 GA11088-PA 113..551 1..439 2006 86.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:07:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14022-PA 548 GM14022-PA 110..548 1..439 2337 98.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:07:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13301-PA 548 GD13301-PA 110..548 1..439 2328 98.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:07:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13420-PA 546 GJ13420-PA 110..545 1..438 1931 83.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:07:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20463-PA 550 GK20463-PA 113..547 1..435 2004 86.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:07:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20656-PA 549 GE20656-PA 110..546 1..437 2292 96.6 Plus

GH12991.hyp Sequence

Translation from 1427 to 2746

> GH12991.hyp
MDHRAEQETQEINAFKHSLLKYVGGQVSLEMEVPKLLWLKRNLSQTFGNI
WRVFDLPDFLTWRATGVDTRSLCSVVCKWNYDAANGSWNKEFLKQADLEE
LTQNNFEKLGSDVQPPGRTVGKGLTAKAAGELGLSAGTVVSTSLIDAHAG
ALGMFGCRSKESKGADDVQGKMALIAGTSTCHMSITRKACFAQGVWGPYQ
DAIIPGYFLNEGGQSIAGHLLDHVLKSHESYAELKSQLGEDKFIYQHLNK
LLPELAAARGLSQVGCLTQDVHVWPDLHGNRSPIADPTLRGVITGLDMTR
GTESLAIKYLAFVQALAYGTRHIIENLYQYGRAPFQTLLFCGGLAKNPLY
VQCHADICNLPALIPDEQEMVLVGAAALGAAASGHFDSLESASKSMGGTG
QLVKPNAETLEFHNRKYKVFLQLLENQRQYRRIMQADTK*

GH12991.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:38:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG11594-PE 548 CG11594-PE 110..548 1..439 2304 100 Plus
CG11594-PD 548 CG11594-PD 110..548 1..439 2304 100 Plus
CG11594-PC 548 CG11594-PC 110..548 1..439 2304 100 Plus
CG11594-PA 548 CG11594-PA 110..548 1..439 2304 100 Plus