BDGP Sequence Production Resources |
Search the DGRC for GH13040
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 130 |
Well: | 40 |
Vector: | pOT2 |
Associated Gene/Transcript | mlt-RA |
Protein status: | GH13040.pep: gold |
Preliminary Size: | 1896 |
Sequenced Size: | 2192 |
Gene | Date | Evidence |
---|---|---|
CG12214 | 2001-01-01 | Release 2 assignment |
CG12214 | 2001-07-04 | Blastp of sequenced clone |
CG12214 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12214 | 2008-04-29 | Release 5.5 accounting |
CG12214 | 2008-08-15 | Release 5.9 accounting |
CG12214 | 2008-12-18 | 5.12 accounting |
2192 bp (2192 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051458
> GH13040.complete GTGGCATTGCGAGCGGACGGAGAGTGATTCGGAAAAGCAGAATAGCTGAA AAGCGGAAAAGCTGGCCACTGCGACAAAGGTTAAGCAGCAGCGACAAACA CAAAACGACAACAAAGGGAAAACGCATCTAAGCTGGCGCAGAGATCCCAA AAAAAATACACTCCAAAAACCAGCCCAGACCAACGCACTTTGGGTTTCTT TGTTACGATCTTTTTAACATCGAGTCGAAGCACGGAGTCAAAAAAGTCTT CGAATTAGTGCGCAATATTTAACGGAATAACAAGAAACACAACGAACGCG AAACGTGCGCAATAATTTGTTTAAAATCAATGAAGACTGCAACTGCGCAA AACTGAAAAATTGCATCATAGCCAACACAGAACGGGGCAGGGAAAAGTCT ATGAGCGCGGAAAAGTGGAAAATCAATAGGGGGCAGAATAAGTAAAGCCC GAATAAATATAGGGGGATCCAAAACCAATCCCATCTAAGTAATCATCAAA AGTGCAAGTTCGCTATGCCTTCCCTTTTGGAGGCGCTGGAGCGCAAGTAC TTCGCAGAATGCGAATTCGAGAATGCCCACCAACCGGAACTCCACAAACG AAGCGACCTGCCCAATGACTTTACGGTCACCAAGTGCGGCGGACGCATGG AGTTCTCCATCTTCATACCCCGCCTATCCCCGCTGACCAGTGTGCCAGCC TTGCTAGTCCTCAACGACTGTGACATCGATTCGGCCGGGGACTTCGACAG CATCCGGGAGAAGTGCCAGCGGGTGAGGGAACTGGATCTGGCCCAGAACA AGCTGAGCGACTGGTCGGAGGTCTTCAGCATACTGGAGCACATGCCGCGC ATTGAGTTCCTCAACCTGAGCAAGAACCAGCTGGCCAGTCCGATCGGCAC GTTGCCCACGGCTCCCACGATCAATCTGAAGAGCCTGGTGCTGAACGGCA CCTACTTGGACTGGGCCTGCGTGGATACCCTGCTGAAGAATTTGCCCGTG CTCCAGGAACTGCATCTCAGCCTGAACAACTACAGGCAGGTGCTGATCGA TGCTGAGGAGGCGGAACAGCGGCTGCAGGAAACGGAAACGCCAGAGGAAA CCGAGCGGCGAATCACCAAAGCACATCCTGCTCTAAAGACCCTGCATTTC ACCGGTAATCCCGTCGAGCACTGGCAGGAAATCTGCCGGCTGGGCCGGCT GTTTCCCAACCTCGAGGCCCTCGTTCTGGCAGACTGTCCCATCAAATCGC TGCAGGCCGAGGAGAGCAGCGAGACACATAGATACTTCCCCAGCCTGAGG CTTTTGAACCTAAGTTCCGCGCAACTGGATAGCTGGGCGGCCATCGATGA GCTGGCCAAGTTTAGCGAGCTACGCAACCTCCGTGTGAAACACTGGCCCC TCTGGGAAAGTCTGGAGTGCACGGAGCACGAGAGAAGGCAGCTCCTGATA GCCAGGCTGCCCAACGTGGAGATGCTCAACGGAGGCGGCAAGATCAGTAG CGATGAGCGCGTCGACTCGGAGCGAGCTTTTGTCAGATACTATATGGACA AGCCGGAGGAGGAACGGCCTGCGCGCTACCAAGAGCTTCTGCAGATCCAC GGCAAGCTGGATCCCTTGGTCAATGTGAGCCTGAAACCAGACAAGCGGGT CAAGGTCCTGTTCACCTACAACGATGTGAGCGAGAGCCGGTTCGTGGACA TCTATCTGACCGTCAACGATTTGAAGGTGAAGCTGGAGAAGCTGGTGGGT CTGGCGCCCAACAAGATGCGCCTCTACTATCTGGATCAGGACTACAAGGA ATTCGGGCCGGAGGAGATGAGGTACCCCAACAAGCAGTTGTACAGCTACA ACATCCAGTCGGGCGACGAGATCATCATCGATGCCAAGAAGTGAGGCGCG ACGTATGGGCTACATGCTTCCGTATCTGGAGAGGATTACCATTAACCCGA ACCGCCCTTCGTCCCCCGCCTGGTGCTACAACTTGTGATCTTGTACACGA ATCATTTACATTTACTTTACTCTACTGTTAGTGCCGTTCTGTTCTCCGCA GCGAACCCCTGTGTACATACGTTCTGAAAATGGCCAAGCGAGCATTACTG CGCACCCACATCGTATATTTTAATTATTACTGCCTAACCTAAGCCACACA CAAAATACAAATACAAACCACCACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 6043932..6046110 | 2174..1 | 10645 | 99.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 10156372..10158566 | 2192..1 | 10865 | 99.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 10157571..10159765 | 2192..1 | 10875 | 99.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
McClintock | 6450 | McClintock McCLINTOCK 6450bp | 874..1094 | 240..461 | 133 | 54 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 6043932..6046110 | 1..2174 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12214-RA | 1..1380 | 515..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12214-RA | 1..1380 | 515..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mlt-RB | 1..1380 | 515..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12214-RA | 1..1380 | 515..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mlt-RB | 1..1380 | 515..1894 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12214-RA | 1..2177 | 1..2174 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12214-RA | 1..2177 | 1..2174 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mlt-RB | 366..2542 | 1..2174 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12214-RA | 1..2177 | 1..2174 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mlt-RB | 366..2542 | 1..2174 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10156390..10158566 | 1..2174 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10156390..10158566 | 1..2174 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10156390..10158566 | 1..2174 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 6043895..6046071 | 1..2174 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10157589..10159765 | 1..2174 | 99 | Minus |
Translation from 514 to 1893
> GH13040.pep MPSLLEALERKYFAECEFENAHQPELHKRSDLPNDFTVTKCGGRMEFSIF IPRLSPLTSVPALLVLNDCDIDSAGDFDSIREKCQRVRELDLAQNKLSDW SEVFSILEHMPRIEFLNLSKNQLASPIGTLPTAPTINLKSLVLNGTYLDW ACVDTLLKNLPVLQELHLSLNNYRQVLIDAEEAEQRLQETETPEETERRI TKAHPALKTLHFTGNPVEHWQEICRLGRLFPNLEALVLADCPIKSLQAEE SSETHRYFPSLRLLNLSSAQLDSWAAIDELAKFSELRNLRVKHWPLWESL ECTEHERRQLLIARLPNVEMLNGGGKISSDERVDSERAFVRYYMDKPEEE RPARYQELLQIHGKLDPLVNVSLKPDKRVKVLFTYNDVSESRFVDIYLTV NDLKVKLEKLVGLAPNKMRLYYLDQDYKEFGPEEMRYPNKQLYSYNIQSG DEIIIDAKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12136-PA | 469 | GF12136-PA | 1..469 | 1..459 | 2216 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25228-PA | 459 | GG25228-PA | 1..459 | 1..459 | 2393 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20121-PA | 496 | GH20121-PA | 1..496 | 1..459 | 2013 | 77.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mlt-PC | 459 | CG12214-PC | 1..459 | 1..459 | 2390 | 100 | Plus |
mlt-PA | 459 | CG12214-PA | 1..459 | 1..459 | 2390 | 100 | Plus |
mlt-PB | 459 | CG12214-PB | 1..459 | 1..459 | 2390 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20213-PA | 488 | GI20213-PA | 1..488 | 1..459 | 2055 | 80.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10489-PA | 462 | GL10489-PA | 1..462 | 1..459 | 2088 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11483-PA | 466 | GA11483-PA | 1..466 | 1..459 | 2121 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20547-PA | 459 | GM20547-PA | 1..459 | 1..459 | 2430 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD26002-PA | 459 | GD26002-PA | 1..459 | 1..459 | 2425 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20163-PA | 491 | GJ20163-PA | 1..491 | 1..459 | 2032 | 78.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10690-PA | 454 | GK10690-PA | 1..454 | 1..459 | 1967 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21743-PA | 459 | GE21743-PA | 1..459 | 1..459 | 2402 | 98.3 | Plus |
Translation from 514 to 1893
> GH13040.hyp MPSLLEALERKYFAECEFENAHQPELHKRSDLPNDFTVTKCGGRMEFSIF IPRLSPLTSVPALLVLNDCDIDSAGDFDSIREKCQRVRELDLAQNKLSDW SEVFSILEHMPRIEFLNLSKNQLASPIGTLPTAPTINLKSLVLNGTYLDW ACVDTLLKNLPVLQELHLSLNNYRQVLIDAEEAEQRLQETETPEETERRI TKAHPALKTLHFTGNPVEHWQEICRLGRLFPNLEALVLADCPIKSLQAEE SSETHRYFPSLRLLNLSSAQLDSWAAIDELAKFSELRNLRVKHWPLWESL ECTEHERRQLLIARLPNVEMLNGGGKISSDERVDSERAFVRYYMDKPEEE RPARYQELLQIHGKLDPLVNVSLKPDKRVKVLFTYNDVSESRFVDIYLTV NDLKVKLEKLVGLAPNKMRLYYLDQDYKEFGPEEMRYPNKQLYSYNIQSG DEIIIDAKK*