BDGP Sequence Production Resources |
Search the DGRC for GH13134
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 131 |
Well: | 34 |
Vector: | pOT2 |
Associated Gene/Transcript | nrv2-RC |
Protein status: | GH13134.pep: gold |
Preliminary Size: | 2181 |
Sequenced Size: | 2149 |
Gene | Date | Evidence |
---|---|---|
CG9261 | 2001-01-01 | Release 2 assignment |
CG9261 | 2001-07-04 | Blastp of sequenced clone |
CG9261 | 2003-01-01 | Sim4 clustering to Release 3 |
nrv2 | 2008-04-29 | Release 5.5 accounting |
nrv2 | 2008-08-15 | Release 5.9 accounting |
nrv2 | 2008-12-18 | 5.12 accounting |
2149 bp (2149 high quality bases) assembled on 2001-07-04
GenBank Submission: AY060289
> GH13134.complete CGGCGCACAGCGGTGTCAACTTGTCGTGTGCAGCGCATATCCAAAGTGTT ACAGAGTAAAACCATCAGCCTTTCCAGCCATAGACCAAAGCCAACCGAGC CTTACACGGGATCTACACCGAACTGCCCAGGAGTCCAGTTGGATACACGA TCCACCTCACATATCCATACCCCTACACATTCCAATTTCCAATCCAGTGA TTCGAAAACCTTTGCCCACGCGATCCCGATCACGAAACCGTTTAGCCGTT GAACTGAGGAAGCGCCAGCCAAAGAAGAAGCCTGGTATAATGCCTACCAT AACCGAGGATTGCATAGATGGATTCCAACAGTACTACTCGCGGCCACCGG AGAGGCCCAAGAAGAAGTCCCTGAAGCAGATGGTCTACGACTCGGAGGAC AACTCCTACTTCGGACGCTCGATGGACAGCTGGGCCAAAATCGGAATCTT CTATGTGGCCTTCTACGGAGTCCTAGCCGCCCTCGTTGCCATCTGCATGT GGGCCTTCTTCCAAACTCTCGATCCTCGCATTCCCAAGTGGACCCTGGAC CGTTCCCTGATAGGTACAAATCCAGGTCTAGGTTTTCGACCCCTGCCACC GGTGGACAATGTGGAAAGCACTTTGATCTGGTACAAGGGCACCCAACACG AGAACTACAAGCACTGGACAGACTCCCTGGATGATTTCCTTGCGGTGTAC AAAGTACCTGGTCTAACACCCGGCCGTGGTCAGAACATCTACAACTGCGA CTACAACCAGCCGCCGCCAAAGGGTCAGGTGTGCGACGTGGACATCAAGA CGTGGTCGCCGTGCACCAAGGAGAATAACTACAGCTACCACAAGAGTGCG CCGTGTATCTTCCTCAAGCTGAACAAGATCTACGGCTGGATTCCGGAGTA CTACAACAGATCGAATGACTTGCCCGCGAACATGCCCGCCAGCTTGAAGA CCTACATCGCAGAGGTCGAGAAGACGCAGCCAGAAAAGCTAAACACCATT TGGGTATCGTGCGAGGGCGAGAACCCAGCCGACCAGGAGAACATTGGTGC TGTCAACTACCTGCCAATCAGGGGATTCCCCGGCTACTTCTATCCCTACC AGAACTCCGAGGGCTACTTGAGTCCCCTGGTGGCGGTGCACTTCCAGCGC CCCAAACGCGGAATCATCATCAACGTGGAGTGCAGGGCTTGGGCTCGCAA CATCATACACGATCGCAAGGAGAGAATCGGATCGGTGCACTATGAGCTCC TCATTGATTAAATTGTACCACACTATTACAACATAACATAATAGCAAACA CAATAACAAGAATCTCCGATTAACAAGAATCTCGGTATCAGAGGTGTGTG AGGACGATAAGTCTCGTCTAAGACAATCCTACCAGAGGCAAACCACCAGA TGTTGTAGTGAAGATTGTGAAAGGTTCAGATTTTCGAATGTCATTAAAAA TCCAAATTATTTAAACTTGTTTTCCGCGTTATAAAGCATACAAAATATAT ATTCAAGACTTGCAACGCCTATAAACATACAAATTTTGAATTCCAATAAC TTTTTATGCACTTTACGATGAAAGTTAGACGTAAGATTGTAAAGCTAAAC CACCAAGATGGGAACTCAATGGACAGGATGGAACTAAACCAGCCTGAATC TCGTTTGGCGCTGACCAGTAAATTTGGCGCTGACCAGTAAATAGTAAATC AATCAAATGCAACAAATTTACAGCAATTAATCCAAACTGCCATTTCCAAT GAATTAACAAACGAATCCCTAGATATTACAAATTTATAAAGAAAATTTAA GAATCATTTTTGAGTCTGCCGCTATGTAACATGTAACCGAAAACAGACCA ATTTTGTCTACCAAAAATCTAAATATTTACAGCTAGCTTCAGAATTTACC ATATTTATTAATAACTTAGTCAAAAGTGAAGCCTATATACATATACATCA CATTTTGATAGACGACAAAAGTGCAACATTTGGAAAACAGAAAATCGTAA CTTCGGTTAACTTGTAAGCTTATGATATAATAATTGCGAAGATTGAAATT TAAGGAAATAAATTGAGACGGCTAAGAGACACAAAACACTTTCAATTCCT TTTCAATAAAAATCAAATGAAAGTAGTCAGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 6788817..6789792 | 2130..1158 | 4710 | 99.1 | Minus |
chr2L | 23010047 | chr2L | 6795386..6795819 | 434..1 | 2155 | 99.8 | Minus |
chr2L | 23010047 | chr2L | 6790080..6790377 | 988..691 | 1475 | 99.7 | Minus |
chr2L | 23010047 | chr2L | 6789847..6790018 | 1158..987 | 815 | 98.3 | Minus |
chr2L | 23010047 | chr2L | 6790748..6790891 | 577..434 | 720 | 100 | Minus |
chr2L | 23010047 | chr2L | 6790567..6790689 | 695..573 | 615 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6789766..6790742 | 2134..1158 | 4885 | 100 | Minus |
2L | 23513712 | 2L | 6796337..6796770 | 434..1 | 2170 | 100 | Minus |
2L | 23513712 | 2L | 6791031..6791328 | 988..691 | 1475 | 99.7 | Minus |
2L | 23513712 | 2L | 6790798..6790969 | 1158..987 | 860 | 100 | Minus |
2L | 23513712 | 2L | 6791699..6791842 | 577..434 | 720 | 100 | Minus |
2L | 23513712 | 2L | 6791518..6791640 | 695..573 | 615 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6789766..6790742 | 2134..1158 | 4885 | 100 | Minus |
2L | 23513712 | 2L | 6796337..6796770 | 434..1 | 2170 | 100 | Minus |
2L | 23513712 | 2L | 6791031..6791328 | 988..691 | 1475 | 99.6 | Minus |
2L | 23513712 | 2L | 6790798..6790969 | 1158..987 | 860 | 100 | Minus |
2L | 23513712 | 2L | 6791699..6791842 | 577..434 | 720 | 100 | Minus |
2L | 23513712 | 2L | 6791518..6791640 | 695..573 | 615 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 925..961 | 1150..1185 | 119 | 83.8 | Plus |
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 4633..4686 | 536..483 | 117 | 68.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6788817..6789792 | 1158..2130 | 99 | <- | Minus |
chr2L | 6789848..6790016 | 989..1157 | 98 | <- | Minus |
chr2L | 6790080..6790372 | 696..988 | 100 | <- | Minus |
chr2L | 6790567..6790686 | 576..695 | 100 | <- | Minus |
chr2L | 6790750..6790890 | 435..575 | 100 | <- | Minus |
chr2L | 6795386..6795819 | 1..434 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv2-RF | 1..972 | 290..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv2-RF | 1..972 | 290..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv2-RC | 1..972 | 290..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv2-RF | 1..972 | 290..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv2-RC | 1..972 | 290..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv2-RF | 11..2140 | 1..2130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv2-RF | 11..2140 | 1..2130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv2-RC | 539..2668 | 1..2130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv2-RF | 11..2140 | 1..2130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nrv2-RC | 539..2668 | 1..2130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6790799..6790967 | 989..1157 | 100 | <- | Minus |
2L | 6789770..6790742 | 1158..2130 | 100 | <- | Minus |
2L | 6791031..6791323 | 696..988 | 100 | <- | Minus |
2L | 6791518..6791637 | 576..695 | 100 | <- | Minus |
2L | 6791701..6791841 | 435..575 | 100 | <- | Minus |
2L | 6796337..6796770 | 1..434 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6790799..6790967 | 989..1157 | 100 | <- | Minus |
2L | 6789770..6790742 | 1158..2130 | 100 | <- | Minus |
2L | 6791031..6791323 | 696..988 | 100 | <- | Minus |
2L | 6791518..6791637 | 576..695 | 100 | <- | Minus |
2L | 6791701..6791841 | 435..575 | 100 | <- | Minus |
2L | 6796337..6796770 | 1..434 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6790799..6790967 | 989..1157 | 100 | <- | Minus |
2L | 6789770..6790742 | 1158..2130 | 100 | <- | Minus |
2L | 6791031..6791323 | 696..988 | 100 | <- | Minus |
2L | 6791518..6791637 | 576..695 | 100 | <- | Minus |
2L | 6791701..6791841 | 435..575 | 100 | <- | Minus |
2L | 6796337..6796770 | 1..434 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6791701..6791841 | 435..575 | 100 | <- | Minus |
arm_2L | 6791031..6791323 | 696..988 | 100 | <- | Minus |
arm_2L | 6790799..6790967 | 989..1157 | 100 | <- | Minus |
arm_2L | 6791518..6791637 | 576..695 | 100 | <- | Minus |
arm_2L | 6789770..6790742 | 1158..2130 | 100 | <- | Minus |
arm_2L | 6796337..6796770 | 1..434 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6791518..6791637 | 576..695 | 100 | <- | Minus |
2L | 6791701..6791841 | 435..575 | 100 | <- | Minus |
2L | 6791031..6791323 | 696..988 | 100 | <- | Minus |
2L | 6790799..6790967 | 989..1157 | 100 | <- | Minus |
2L | 6789770..6790742 | 1158..2130 | 100 | <- | Minus |
2L | 6796337..6796770 | 1..434 | 100 | Minus |
Translation from 1 to 1260
> GH13134.hyp GAQRCQLVVCSAYPKCYRVKPSAFPAIDQSQPSLTRDLHRTAQESSWIHD PPHISIPLHIPISNPVIRKPLPTRSRSRNRLAVELRKRQPKKKPGIMPTI TEDCIDGFQQYYSRPPERPKKKSLKQMVYDSEDNSYFGRSMDSWAKIGIF YVAFYGVLAALVAICMWAFFQTLDPRIPKWTLDRSLIGTNPGLGFRPLPP VDNVESTLIWYKGTQHENYKHWTDSLDDFLAVYKVPGLTPGRGQNIYNCD YNQPPPKGQVCDVDIKTWSPCTKENNYSYHKSAPCIFLKLNKIYGWIPEY YNRSNDLPANMPASLKTYIAEVEKTQPEKLNTIWVSCEGENPADQENIGA VNYLPIRGFPGYFYPYQNSEGYLSPLVAVHFQRPKRGIIINVECRAWARN IIHDRKERIGSVHYELLID*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nrv2-PG | 323 | CG9261-PG | 1..323 | 97..419 | 1792 | 100 | Plus |
nrv2-PF | 323 | CG9261-PF | 1..323 | 97..419 | 1792 | 100 | Plus |
nrv2-PC | 323 | CG9261-PC | 1..323 | 97..419 | 1792 | 100 | Plus |
nrv2-PE | 322 | CG9261-PE | 21..322 | 118..419 | 1589 | 94.7 | Plus |
nrv2-PA | 322 | CG9261-PA | 21..322 | 118..419 | 1589 | 94.7 | Plus |
Translation from 289 to 1260
> GH13134.pep MPTITEDCIDGFQQYYSRPPERPKKKSLKQMVYDSEDNSYFGRSMDSWAK IGIFYVAFYGVLAALVAICMWAFFQTLDPRIPKWTLDRSLIGTNPGLGFR PLPPVDNVESTLIWYKGTQHENYKHWTDSLDDFLAVYKVPGLTPGRGQNI YNCDYNQPPPKGQVCDVDIKTWSPCTKENNYSYHKSAPCIFLKLNKIYGW IPEYYNRSNDLPANMPASLKTYIAEVEKTQPEKLNTIWVSCEGENPADQE NIGAVNYLPIRGFPGYFYPYQNSEGYLSPLVAVHFQRPKRGIIINVECRA WARNIIHDRKERIGSVHYELLID*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14479-PA | 323 | GF14479-PA | 1..323 | 1..323 | 1661 | 93.5 | Plus |
Dana\GF14332-PA | 311 | GF14332-PA | 8..311 | 14..323 | 872 | 50.6 | Plus |
Dana\GF14480-PA | 309 | GF14480-PA | 16..309 | 20..323 | 681 | 42.5 | Plus |
Dana\GF18471-PA | 386 | GF18471-PA | 24..260 | 22..308 | 194 | 25.5 | Plus |
Dana\GF18472-PA | 378 | GF18472-PA | 36..276 | 32..320 | 159 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23580-PA | 323 | GG23580-PA | 1..323 | 1..323 | 1692 | 96.6 | Plus |
Dere\GG21302-PA | 311 | GG21302-PA | 8..311 | 14..323 | 861 | 50.3 | Plus |
Dere\GG23582-PA | 309 | GG23582-PA | 16..309 | 20..323 | 651 | 42.2 | Plus |
Dere\GG21303-PA | 204 | GG21303-PA | 30..204 | 148..323 | 548 | 54.5 | Plus |
Dere\GG16108-PA | 345 | GG16108-PA | 20..274 | 18..320 | 213 | 22.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10786-PA | 323 | GH10786-PA | 1..323 | 1..323 | 1606 | 88.9 | Plus |
Dgri\GH13318-PA | 311 | GH13318-PA | 8..311 | 14..323 | 838 | 48.9 | Plus |
Dgri\GH10787-PA | 309 | GH10787-PA | 9..309 | 13..323 | 618 | 39.3 | Plus |
Dgri\GH22397-PA | 277 | GH22397-PA | 25..274 | 21..320 | 229 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nrv2-PG | 323 | CG9261-PG | 1..323 | 1..323 | 1792 | 100 | Plus |
nrv2-PF | 323 | CG9261-PF | 1..323 | 1..323 | 1792 | 100 | Plus |
nrv2-PC | 323 | CG9261-PC | 1..323 | 1..323 | 1792 | 100 | Plus |
nrv2-PE | 322 | CG9261-PE | 21..322 | 22..323 | 1589 | 94.7 | Plus |
nrv2-PA | 322 | CG9261-PA | 21..322 | 22..323 | 1589 | 94.7 | Plus |
nrv2-PD | 322 | CG9261-PD | 21..322 | 22..323 | 1589 | 94.7 | Plus |
nrv3-PE | 313 | CG8663-PE | 8..313 | 14..323 | 886 | 50.3 | Plus |
nrv3-PD | 311 | CG8663-PD | 8..311 | 14..323 | 884 | 50.3 | Plus |
nrv3-PC | 311 | CG8663-PC | 8..311 | 14..323 | 884 | 50.3 | Plus |
nrv3-PA | 311 | CG8663-PA | 8..311 | 14..323 | 884 | 50.3 | Plus |
nrv1-PB | 309 | CG9258-PB | 16..309 | 20..323 | 654 | 42.2 | Plus |
nrv1-PA | 309 | CG9258-PA | 16..309 | 20..323 | 654 | 42.2 | Plus |
CG11703-PA | 353 | CG11703-PA | 20..274 | 18..320 | 239 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17298-PA | 323 | GI17298-PA | 1..323 | 1..323 | 1537 | 85.8 | Plus |
Dmoj\GI12264-PA | 310 | GI12264-PA | 8..310 | 14..323 | 841 | 48.7 | Plus |
Dmoj\GI17299-PA | 309 | GI17299-PA | 11..309 | 15..323 | 668 | 42.3 | Plus |
Dmoj\GI16930-PA | 276 | GI16930-PA | 34..271 | 30..320 | 180 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25960-PA | 323 | GL25960-PA | 1..323 | 1..323 | 1655 | 93.8 | Plus |
Dper\GL26665-PA | 311 | GL26665-PA | 8..311 | 14..323 | 859 | 50 | Plus |
Dper\GL25961-PA | 309 | GL25961-PA | 20..309 | 24..323 | 659 | 42.6 | Plus |
Dper\GL25223-PA | 321 | GL25223-PA | 23..321 | 20..323 | 543 | 37.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21652-PA | 323 | GA21652-PA | 1..323 | 1..323 | 1659 | 94.1 | Plus |
Dpse\GA21243-PA | 311 | GA21243-PA | 8..311 | 14..323 | 859 | 50 | Plus |
Dpse\GA21650-PA | 309 | GA21650-PA | 20..309 | 24..323 | 657 | 42.1 | Plus |
Dpse\GA22950-PA | 321 | GA22950-PA | 23..321 | 20..323 | 548 | 37.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13825-PA | 323 | GM13825-PA | 1..323 | 1..323 | 1731 | 99.4 | Plus |
Dsec\GM23414-PA | 311 | GM23414-PA | 8..311 | 14..323 | 861 | 50.3 | Plus |
Dsec\GM13836-PA | 309 | GM13836-PA | 16..309 | 20..323 | 652 | 41.8 | Plus |
Dsec\GM26920-PA | 347 | GM26920-PA | 20..274 | 18..320 | 233 | 24 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22540-PA | 340 | GD22540-PA | 1..340 | 1..323 | 1685 | 92.9 | Plus |
Dsim\GD22541-PA | 309 | GD22541-PA | 16..309 | 20..323 | 659 | 42.2 | Plus |
Dsim\GD20125-PA | 347 | GD20125-PA | 20..274 | 18..320 | 237 | 24.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15658-PA | 323 | GJ15658-PA | 1..323 | 1..323 | 1590 | 89.8 | Plus |
Dvir\GJ17853-PA | 311 | GJ17853-PA | 8..311 | 14..323 | 843 | 48.2 | Plus |
Dvir\GJ15669-PA | 309 | GJ15669-PA | 10..309 | 14..323 | 650 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24210-PA | 323 | GK24210-PA | 1..323 | 1..323 | 1614 | 90.7 | Plus |
Dwil\GK18742-PA | 311 | GK18742-PA | 8..311 | 14..323 | 864 | 50 | Plus |
Dwil\GK24211-PA | 309 | GK24211-PA | 16..309 | 20..323 | 664 | 42.2 | Plus |
Dwil\GK13483-PA | 345 | GK13483-PA | 34..262 | 30..311 | 168 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18402-PA | 323 | GE18402-PA | 1..323 | 1..323 | 1696 | 96.6 | Plus |
Dyak\GE12918-PA | 311 | GE12918-PA | 8..311 | 14..323 | 863 | 50.3 | Plus |
Dyak\GE18403-PA | 309 | GE18403-PA | 16..309 | 20..323 | 655 | 42.2 | Plus |
Dyak\GE25144-PA | 348 | GE25144-PA | 20..273 | 18..320 | 241 | 24.4 | Plus |