BDGP Sequence Production Resources |
Search the DGRC for GH13213
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 132 |
Well: | 13 |
Vector: | pOT2 |
Associated Gene/Transcript | CG32392-RB |
Protein status: | GH13213.pep: gold |
Preliminary Size: | 2458 |
Sequenced Size: | 2514 |
Gene | Date | Evidence |
---|---|---|
CG10099 | 2001-01-01 | Release 2 assignment |
CG32392 | 2001-07-04 | Blastp of sequenced clone |
CG32392 | 2008-04-29 | Release 5.5 accounting |
CG32392 | 2008-08-15 | Release 5.9 accounting |
CG32392 | 2008-12-18 | 5.12 accounting |
2514 bp (2514 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051459
> GH13213.complete CCATTCGAGCCGTGCGGTACGTGTTCCGCGACAAAATCAAACAATCAACC AACGAACGCAACACCTGAGCGGCGCACAAAAGGGAAAAATATAGGAAAAG TATTGATTAAGTTTTTCGGTGCGGCGGGTGAGAGAACCGTGTGGTGGCTA TTTATAATGAACGAGGTGACCGGCGGCCGGGAGCAGGGATAACCGAGACG GTAGCGGAGACCATGCCAGAGACGGAGCAGCAGCAGCACCCAGCACACTC ACATCCTGAACTTAAGCCAGATCCACAGCCAGTGCCAGAACTGGAGCACC TCACCGACAATAGACCGAATCGCGTGCAGAACTTCTCCTTCGCCAGCAGC TATCCCTACGCACCAGGACGCGTCTCGTCCAGCTCCAATTCGAACACCAA CTACAGCTCCACCAACTACAACGCCGGCGGCTTCAACGTCCAGCGCTATC AGAGTCCCTACAATTTCCAGCACGTGGTGACCAACGCATTCTCGGTGCTG CGCCATCAGCCCTCCGAGGAGCCCGAATTCGATTCCTATCCAACGCGACC CCAACAGGCCATCGTGCGTCCGATTAGACGTGAGGCGGGCATAGCTGATA ACCGTGATAATCATGTAGGGAATCCTCCACAGCGATCGCACTTCTCGCGC AGCAACCAGGAGGTGCGCAGCTTCGCCGATGAGCTGAGCCAGAAGCTGCG CTTCCTGGCGCCGGAGGAGCAGAACTACGGCGGTCGCCAGAGCGCCAATT CCGGTGCCTGGATGGATCCAGCGATGTCGCAGCGACCACGATTCGAGACC ACAGTGCCGCAGGGCATCTTCCTGCCGCCTCCGCATGAGGTCCAAATGAT ACCGGCCACCATGCTGAGGAGGCATGTCTACGCCTACTCCTCATATCCCA TGATCCTCCAAGGGTATCTCACCAAGGAGACCGGCAGTGAGAGCAAGGAG CAGAAGGTGACCGCCACCCGGCTGAACGGTTTGCGTGCCACGGCGGCAGT GGCGGCGGCCACAGCTGCGGCCTCCAAATCCTCCCGTAACGATACGCAAT CCCTCGCCGGTGGACTCCACATCACCAAGGCTCAGTTCCAACAACAACTG CAACAGCGTCGCTCCACCAGCAACAACAACAACAACAGCAGCAGCAACAT CAGCGACAAGAGACCCGTCGTCCCGCCGCCGGAACCCTACAAGAACGTCA TGTACGACCGTCGCGTCATAAAGGGCAGCAACTTCGGCAACGCCTCTCTG GTGACGGATGTGGATCCCTTCGACAAGGCCGCCGAATTGAGGCGTCGCAA TATGTTGCGCAAACGGACGATGCAGTGCCGCAATCAGAGAAATGTCCTGG GCACACCGCCGCCGGTCAAGGGGCGGAAGCACGAGACCATACAGACGGAG AAGTATCTGGAGAAGTTGGTGCAGCGTCCGCCGGAGTTCACCATCGACAC GCAGACGGACCTGTTCCTCGAGAAGCCGCCGACGCCTCCGTTCATACCGG CCAAGGTGGGCGTGGATGTGGCCACCGAGATCGGTGAGGGCGAACTCTTC CACTTCGATGCCGAGGCGCAGCCAATCATCGATGTCCTGGTGGACGCCTG CATTGAACAAAGCATGCTGGAGGTGGCTCACGAGATGGAACTGTCCAGTC TGCGACGCAAACAGGAAGAATTCCTGGCCCAGAGGGAGGCGGAACTGGCC GAGCTGCGCCGTTTGGAGGCTGAGGAGCTGCGCTTGCAGGCGGAGAAGGA GCGTCGCCTGCGACAAGATGCGATTGCCAAGGAGCTGGACGCTGAGATGC AGAAGAGCGTGACGGCGGCCAAGTTGCTCCAGGGACACATTGCCAGTCTG GTGCCGGAGGTGCTGGAGAACATTGAGCCGGCCAGCGATGCCGTTAAGAA GGAGCAGCTTATGAAGAGCGTCTGCCCGTGGTTGTCCGCCGAGGTGGCCG AGGAAGTGGGCCATATAGTGGACTCGCGCGAGATTCTCACCGCCATCATT CAGGAGATTATCAAGCAGCGTGCCGAGATCTATGCCGGCTACAAGGAACC TGAATCGGAACCATCCGGACCGGATGCGGGCGTTTGTGAGGAGGAGGGCT GTGCCATCGATGAGATGGAGGCGTGTCCCTGCGAATCGGAAACGGAAATG GAGGAGTGCCCCGAACCGCCACCACCGGCTCCTCATCTCTAAGTGATTGC GTTCGAGTTTTAGTTCATATATATATTTCGAGTGGGATACTGATTCCGCA CACATGTAACACTAACACACTCCTGCTATTAAATCAAGGTTGGCTGCAAC TTTGTGGTTGTGTCTGGTGAAGAACTCAATTCGCCGCAGGATTCGAATCG AGCCTGGGCGCCAAACACAATTGCATAGCGGCGGCGGCGAAATGGCATCG AAAAAATGGAATGGCATATTGTAAACTGGATACTTGTTAAAGGTTTTTGT GTTACCGAAAATTCAACCAATAAAGCTCAACAAAATAAGCCGAACAAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 6752316..6753495 | 1162..1 | 5350 | 97.3 | Minus |
chr3L | 24539361 | chr3L | 6749002..6749827 | 2495..1670 | 4055 | 99.4 | Minus |
chr3L | 24539361 | chr3L | 6749892..6750308 | 1669..1253 | 2085 | 100 | Minus |
chr3L | 24539361 | chr3L | 6750393..6750485 | 1253..1161 | 465 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 6759941..6761102 | 1162..1 | 5810 | 100 | Minus |
3L | 28110227 | 3L | 6756625..6757454 | 2499..1670 | 4150 | 100 | Minus |
3L | 28110227 | 3L | 6757519..6757935 | 1669..1253 | 2085 | 100 | Minus |
3L | 28110227 | 3L | 6758020..6758112 | 1253..1161 | 465 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 6753041..6754202 | 1162..1 | 5810 | 100 | Minus |
3L | 28103327 | 3L | 6749725..6750554 | 2499..1670 | 4150 | 100 | Minus |
3L | 28103327 | 3L | 6750619..6751035 | 1669..1253 | 2085 | 100 | Minus |
3L | 28103327 | 3L | 6751120..6751212 | 1253..1161 | 465 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6952 | 213..452 | 178 | 58 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2347..2535 | 226..422 | 154 | 57.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2632..2838 | 226..437 | 120 | 54.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 6749002..6749827 | 1670..2495 | 99 | <- | Minus |
chr3L | 6749892..6750307 | 1254..1669 | 100 | <- | Minus |
chr3L | 6750393..6750485 | 1161..1253 | 100 | == | Minus |
chr3L | 6752396..6753495 | 1..1088 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32392-RB | 1..1980 | 213..2192 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32392-RB | 1..1980 | 213..2192 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32392-RB | 1..1980 | 213..2192 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32392-RB | 1..1980 | 213..2192 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32392-RB | 1..1980 | 213..2192 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32392-RB | 1..2495 | 1..2495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32392-RB | 1..2495 | 1..2495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32392-RB | 13..2507 | 1..2495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32392-RB | 1..2495 | 1..2495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32392-RB | 13..2507 | 1..2495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6756629..6757454 | 1670..2495 | 100 | <- | Minus |
3L | 6757519..6757934 | 1254..1669 | 100 | <- | Minus |
3L | 6758020..6758110 | 1163..1253 | 100 | <- | Minus |
3L | 6759941..6761102 | 1..1162 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6756629..6757454 | 1670..2495 | 100 | <- | Minus |
3L | 6757519..6757934 | 1254..1669 | 100 | <- | Minus |
3L | 6758020..6758110 | 1163..1253 | 100 | <- | Minus |
3L | 6759941..6761102 | 1..1162 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6756629..6757454 | 1670..2495 | 100 | <- | Minus |
3L | 6757519..6757934 | 1254..1669 | 100 | <- | Minus |
3L | 6758020..6758110 | 1163..1253 | 100 | <- | Minus |
3L | 6759941..6761102 | 1..1162 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 6749729..6750554 | 1670..2495 | 100 | <- | Minus |
arm_3L | 6750619..6751034 | 1254..1669 | 100 | <- | Minus |
arm_3L | 6751120..6751210 | 1163..1253 | 100 | <- | Minus |
arm_3L | 6753041..6754202 | 1..1162 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6749729..6750554 | 1670..2495 | 100 | <- | Minus |
3L | 6750619..6751034 | 1254..1669 | 100 | <- | Minus |
3L | 6751120..6751210 | 1163..1253 | 100 | <- | Minus |
3L | 6753041..6754202 | 1..1162 | 100 | Minus |
Translation from 212 to 2191
> GH13213.pep MPETEQQQHPAHSHPELKPDPQPVPELEHLTDNRPNRVQNFSFASSYPYA PGRVSSSSNSNTNYSSTNYNAGGFNVQRYQSPYNFQHVVTNAFSVLRHQP SEEPEFDSYPTRPQQAIVRPIRREAGIADNRDNHVGNPPQRSHFSRSNQE VRSFADELSQKLRFLAPEEQNYGGRQSANSGAWMDPAMSQRPRFETTVPQ GIFLPPPHEVQMIPATMLRRHVYAYSSYPMILQGYLTKETGSESKEQKVT ATRLNGLRATAAVAAATAAASKSSRNDTQSLAGGLHITKAQFQQQLQQRR STSNNNNNSSSNISDKRPVVPPPEPYKNVMYDRRVIKGSNFGNASLVTDV DPFDKAAELRRRNMLRKRTMQCRNQRNVLGTPPPVKGRKHETIQTEKYLE KLVQRPPEFTIDTQTDLFLEKPPTPPFIPAKVGVDVATEIGEGELFHFDA EAQPIIDVLVDACIEQSMLEVAHEMELSSLRRKQEEFLAQREAELAELRR LEAEELRLQAEKERRLRQDAIAKELDAEMQKSVTAAKLLQGHIASLVPEV LENIEPASDAVKKEQLMKSVCPWLSAEVAEEVGHIVDSREILTAIIQEII KQRAEIYAGYKEPESEPSGPDAGVCEEEGCAIDEMEACPCESETEMEECP EPPPPAPHL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10886-PA | 408 | GF10886-PA | 78..408 | 326..659 | 1601 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15023-PA | 411 | GG15023-PA | 69..411 | 317..659 | 1765 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17973-PA | 665 | GH17973-PA | 15..663 | 28..653 | 2169 | 69.6 | Plus |
Dgri\GH16107-PA | 404 | GH16107-PA | 75..402 | 326..653 | 1493 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32392-PB | 659 | CG32392-PB | 1..659 | 1..659 | 3422 | 100 | Plus |
CG32392-PA | 411 | CG32392-PA | 69..411 | 317..659 | 1765 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12376-PA | 686 | GI12376-PA | 16..686 | 28..659 | 2214 | 69.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13231-PA | 699 | GL13231-PA | 358..686 | 317..645 | 1586 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28596-PA | 644 | GA28596-PA | 34..628 | 40..642 | 2247 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13816-PA | 723 | GM13816-PA | 83..706 | 32..642 | 2643 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13109-PA | 413 | GD13109-PA | 72..413 | 318..659 | 1768 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12266-PA | 671 | GJ12266-PA | 15..671 | 28..659 | 2191 | 71 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12574-PA | 737 | GK12574-PA | 71..727 | 1..649 | 2111 | 67.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20467-PA | 411 | GE20467-PA | 78..411 | 326..659 | 1615 | 97 | Plus |
Translation from 212 to 2191
> GH13213.hyp MPETEQQQHPAHSHPELKPDPQPVPELEHLTDNRPNRVQNFSFASSYPYA PGRVSSSSNSNTNYSSTNYNAGGFNVQRYQSPYNFQHVVTNAFSVLRHQP SEEPEFDSYPTRPQQAIVRPIRREAGIADNRDNHVGNPPQRSHFSRSNQE VRSFADELSQKLRFLAPEEQNYGGRQSANSGAWMDPAMSQRPRFETTVPQ GIFLPPPHEVQMIPATMLRRHVYAYSSYPMILQGYLTKETGSESKEQKVT ATRLNGLRATAAVAAATAAASKSSRNDTQSLAGGLHITKAQFQQQLQQRR STSNNNNNSSSNISDKRPVVPPPEPYKNVMYDRRVIKGSNFGNASLVTDV DPFDKAAELRRRNMLRKRTMQCRNQRNVLGTPPPVKGRKHETIQTEKYLE KLVQRPPEFTIDTQTDLFLEKPPTPPFIPAKVGVDVATEIGEGELFHFDA EAQPIIDVLVDACIEQSMLEVAHEMELSSLRRKQEEFLAQREAELAELRR LEAEELRLQAEKERRLRQDAIAKELDAEMQKSVTAAKLLQGHIASLVPEV LENIEPASDAVKKEQLMKSVCPWLSAEVAEEVGHIVDSREILTAIIQEII KQRAEIYAGYKEPESEPSGPDAGVCEEEGCAIDEMEACPCESETEMEECP EPPPPAPHL*