BDGP Sequence Production Resources |
Search the DGRC for GH13214
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 132 |
Well: | 14 |
Vector: | pOT2 |
Associated Gene/Transcript | IntS4-RA |
Protein status: | GH13214.pep: gold |
Preliminary Size: | 3480 |
Sequenced Size: | 3472 |
Gene | Date | Evidence |
---|---|---|
CG12113 | 2001-01-01 | Release 2 assignment |
CG12113 | 2001-07-04 | Blastp of sequenced clone |
CG12113 | 2003-01-01 | Sim4 clustering to Release 3 |
l(1)G0095 | 2008-04-29 | Release 5.5 accounting |
l(1)G0095 | 2008-08-15 | Release 5.9 accounting |
l(1)G0095 | 2008-12-18 | 5.12 accounting |
3472 bp (3472 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051460
> GH13214.complete AACCAGGTGGAAGAGTGCAACTCTAGTCTGCATTGGTTGAATCGCGCAAA GGAAAAGGAAACCATGGCGCTGGCCATTAAGAAGCGCGTAGGCACCTACG TGGAAACGGTGGACGGGTCGCCGCCGGTGAAGAAGCTGCGTCTGCAAACG CTGGCCGCTGATGCCAAGGGCGGGAAATCCGGAAAAGTGGGCAATGTGGA GCGCAAGCTGACGGCGCTCAACCAATTGGACGCCTATGTGGGCAACCTGC CCGCCGGTGCGTTGGTCCTGCCCACTGGGACACCAGTTGCTTCGACGGGA GCCCCGTCAACAGGTGTCATCGGAAATCCGCCGGCTGCGGCGACTGGAGC TCCCCCAATGACGGCCGCGAATAGCAGGGAACTGCTGGAGCTCTTGGTCA AGATAACCGATGAGATATCCTATGAGGACGTGGAAATGGGCGAGCTTAAG GAGGTGGCCAGCAAGATCTTCCAACTGTATCAGCTGCAGGAACGCGATAG CGACACCTCCATCCGGGTGAAGCTGCTCGAGCTGCTGTCCGGATTGGGTT GCGAGTGTGCCACCGAGCAGGCGCTTACCATGATCATCGACTACTTTATC TTCTTGTTGAGGAAGGAGGTGTCCCAAAAGGTGCTCGCCCAGGGCATGAT GTGCCTGTTTCGAATCGGGGAGCGCAGGAAGCACATGTTGCCCATATCGT ACAAAACCCAGGTGGCCCACCTAGCCAAGGAGCAGCTGCGCTCCGGTTCG GCGCATACGCAGAAGAACGCCATGCTGGTAATCGGTCGTTTTGCCACCAA AATGGAGGGTGAGCGTCATTACGTATGGAAGTTAGCCTTCTACATCGACT CGCAGGACTCGAGCGTTCGTGCCCAGGCTCTGCACGCCCTGCTGACCCTC GGCGAACGGGGATCCCAACTGCCGGCGGTGCTCTATAAGCGTGCCGTCGA GGCCATGAAGGATGACTACGAGTGTGTGCGCAAGGAAGCTCTACAGCTGG TCTTCATGCTGGGCAATCGGCATCCGGACTACATTTTACCCTCGGACCGC CAGCAGGAGGAGCTGCGCATGATAGACGCTGCGTTCAGCAAGGTCTGCGA AGCCCTGTGCGATCTATCGCTGCAAATTCGCGTGCTCGCAGCGGAATTGC TCGGTGGGATGACCGCCGTAAGCAGGGAGTTCCTACACCAGACACTCGAC AAAAAGCTGATGAGCAATCTGCGCCGGAAGCGAACGGCGCACGAGAGAGG TGCTCGCCTGGTGGCCAGCGGTGAGTGGTCATCGGGTAAACGGTGGGCGG ACGATGCGCCGCAAGAGCACCTCGATGCTCAGAGCATCTCAATTATAGCC AGCGGCGCCTGTGGCGCCCTTATACATGGCCTAGAGGATGAGTTCCTCGA GGTGCGTACTGCGGCAGTGGCCTCCATGTGCAAGCTGGCCCTCTCTCGAC CGGATTTCGCGGTGACCAGCCTAGATTTCCTTGTGGACATGTTCAACGAT GAGATCGAGGATGTGCGGCTGAAGGCCATCTATAGTTTAACGGCCATTGC CAAGCACATAGTGCTGCGCGAGGATCAGCTGGAGATAATGCTTGGATCGC TTGAGGATTACTCCGTGGACGTGCGTGAGGGACTACATCTCATGCTGGGC GCCTGTAGAGTGTCCACACAAACGTGCCTGCTAATGGTGGTGCAGAAGCT GCTAGATGTGCTGGCCAAGTATCCACAGGATCGTAACTCCACCTATGCCT GCATGCGCAAGATTGGCCAGAAGCATCCACATTTGGTGATGGCTGTCGCC GTTCACCTGCTTTACGTGCATCCCTTTTTCGAGACGCCCGAACGCGATGT CGAGGATCCAGCGTATCTGTGCGTTCTGATACTTGTCTTCAATGCTGCAG AACATTTGGTGCCCATTATCAGTTTGCTGCCCACGGCCACCCATCGCCAT TACGCCTATCTGAGAGACTCGATGCCGAATCTGGTGCCCCAGTTGCCCAT TGAGGGTGCGTCCTCGGCGAGTGCGACGCACAGGATCGATTCGGCTATGC ACCAAGCGGGCAGTTCGGCGGAGTACCTGCAGATGATTCTCAGTCACATC GAAGAGATCTTCACCATGACTGACGAGCGCTTGGAGCTGCTCCAGACTGC CCAATCTAATCTGCAGCGCCTGGGATCCATTGATGCGGGCATGTACGGCA CCTCAAACTTTCTAGAGACCTTCTTGGCGGCCCAGATCCAGATCGAACAG ATGCAGCGTTGCGCCAGCACGCAACGAAGCAGGGTGCCCTTGAAGGAATC ACTGGCAGCACTCATCCGAAACTGTCTCAAGCTGCAGCACACTTTCTCCG GCCTCAATTACGGCGATATCTTGCAGGTGAAGCAGCTGCGCCTGAGGGCT TGCGCGCTTCACTTGGTCCTCGTGGTCAGGGATCGCTCACAGAGTGCATT GGGCCCGTGCCAGATGCTTTTGCAAACCGCCGGCGATATAAGTGAGTTCA TCAAGGCGAATACGAAGGATGAGGAGGAGAAGCCACCGGTGGTAGAGACC GATATGCCCATGAAAGAGTCGGTCAGTAGGGATGCCCAGCCGGATAGCTT CACCCGCCAGCTGCTAATCAAACTGGATGGCATATCGGATCCCAAGCCGG GTCGCGTCTTTCGCGAAATTCTGCCGCTGGTCCAGCAGGCTCCTCCGCTT GCATTGCCACCCGCCAATGACAAAATACGCCGCTGTGTGGCCAACATCCT TGAGCCGTGTCCGCTGCAATCGCAGGATAATGTAATTAAGGTCACGGCTG GCCTGATAGCAGCCGTTCCTTTTGTTGCGGAAATCGACAATCTGCTGGAG TCCCAGAAGGCGGACATGCGGATCAAGATCAAGTATCCGGACCAGCACAT GCACACCGTGGTGCCGAAGCAGAGTGACTTCAAGCCCATTATGACGGAGC AGGGCGAGCACAAGACCAATGTGCGCCTGCGCACCACAATCCTGCTGTCG CACAGCGTTTGGACGGAGTCGTCGCTGGTGGAGATCCAACTGTGCCTGGC CGTGCGTCCCGGCAGCGAACTGGAGCTCTGCAAGCCGGCAAAGGTGCTGT TCGCACCCAAACCAGTCAGGCGGGGCATTTAGCCTGACTTCCAGGTAATG GACTAGGTGCTTTTTGTCCTGGCGACGCGGAGCGAGAAGCTGACAAGGCC ACACAGCCGCTGGAGGAGGAGGAGAAGGAGGGGGAGGAGGAGAGCCCAGG GAATTGGCGCAACGAGCAACTGTTATTTAAATATATGTATGTGATTGTTT AAGATACCATAGCAGTTGGTTGCCAAAGTTCTTTCTAAATCGAAAAAACC GAATGTTTAGAGCATCAGTTGTGCGTAGCTTACTTATATCATAATCATAT GTTTAAGATGAATTCATTTCAAATAAAGTGTGTACCATAAATCTTTAAAA AAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(1)G0095-RA | 3542 | l(1)G0095-RA | 89..3541 | 1..3453 | 17250 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 8446957..8448236 | 2167..3446 | 97 | <- | Minus |
chrX | 8448315..8450480 | 1..2166 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0095-RA | 1..3069 | 64..3132 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0095-RA | 1..3069 | 64..3132 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
IntS4-RA | 1..3069 | 64..3132 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0095-RA | 1..3069 | 64..3132 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
IntS4-RA | 1..3069 | 64..3132 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0095-RA | 1..3442 | 1..3442 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0095-RA | 1..3442 | 1..3442 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
IntS4-RA | 21..3466 | 1..3446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0095-RA | 1..3442 | 1..3442 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
IntS4-RA | 21..3466 | 1..3446 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8555239..8556518 | 2167..3446 | 100 | <- | Minus |
X | 8556596..8558761 | 1..2166 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8555239..8556518 | 2167..3446 | 100 | <- | Minus |
X | 8556596..8558761 | 1..2166 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8555239..8556518 | 2167..3446 | 100 | <- | Minus |
X | 8556596..8558761 | 1..2166 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 8449272..8450551 | 2167..3446 | 100 | <- | Minus |
arm_X | 8450629..8452794 | 1..2166 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8563337..8564616 | 2167..3446 | 100 | <- | Minus |
X | 8564694..8566859 | 1..2166 | 100 | Minus |
Translation from 1 to 3131
> GH13214.hyp NQVEECNSSLHWLNRAKEKETMALAIKKRVGTYVETVDGSPPVKKLRLQT LAADAKGGKSGKVGNVERKLTALNQLDAYVGNLPAGALVLPTGTPVASTG APSTGVIGNPPAAATGAPPMTAANSRELLELLVKITDEISYEDVEMGELK EVASKIFQLYQLQERDSDTSIRVKLLELLSGLGCECATEQALTMIIDYFI FLLRKEVSQKVLAQGMMCLFRIGERRKHMLPISYKTQVAHLAKEQLRSGS AHTQKNAMLVIGRFATKMEGERHYVWKLAFYIDSQDSSVRAQALHALLTL GERGSQLPAVLYKRAVEAMKDDYECVRKEALQLVFMLGNRHPDYILPSDR QQEELRMIDAAFSKVCEALCDLSLQIRVLAAELLGGMTAVSREFLHQTLD KKLMSNLRRKRTAHERGARLVASGEWSSGKRWADDAPQEHLDAQSISIIA SGACGALIHGLEDEFLEVRTAAVASMCKLALSRPDFAVTSLDFLVDMFND EIEDVRLKAIYSLTAIAKHIVLREDQLEIMLGSLEDYSVDVREGLHLMLG ACRVSTQTCLLMVVQKLLDVLAKYPQDRNSTYACMRKIGQKHPHLVMAVA VHLLYVHPFFETPERDVEDPAYLCVLILVFNAAEHLVPIISLLPTATHRH YAYLRDSMPNLVPQLPIEGASSASATHRIDSAMHQAGSSAEYLQMILSHI EEIFTMTDERLELLQTAQSNLQRLGSIDAGMYGTSNFLETFLAAQIQIEQ MQRCASTQRSRVPLKESLAALIRNCLKLQHTFSGLNYGDILQVKQLRLRA CALHLVLVVRDRSQSALGPCQMLLQTAGDISEFIKANTKDEEEKPPVVET DMPMKESVSRDAQPDSFTRQLLIKLDGISDPKPGRVFREILPLVQQAPPL ALPPANDKIRRCVANILEPCPLQSQDNVIKVTAGLIAAVPFVAEIDNLLE SQKADMRIKIKYPDQHMHTVVPKQSDFKPIMTEQGEHKTNVRLRTTILLS HSVWTESSLVEIQLCLAVRPGSELELCKPAKVLFAPKPVRRGI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
IntS4-PA | 1022 | CG12113-PA | 1..1022 | 22..1043 | 5167 | 100 | Plus |
Translation from 63 to 3131
> GH13214.pep MALAIKKRVGTYVETVDGSPPVKKLRLQTLAADAKGGKSGKVGNVERKLT ALNQLDAYVGNLPAGALVLPTGTPVASTGAPSTGVIGNPPAAATGAPPMT AANSRELLELLVKITDEISYEDVEMGELKEVASKIFQLYQLQERDSDTSI RVKLLELLSGLGCECATEQALTMIIDYFIFLLRKEVSQKVLAQGMMCLFR IGERRKHMLPISYKTQVAHLAKEQLRSGSAHTQKNAMLVIGRFATKMEGE RHYVWKLAFYIDSQDSSVRAQALHALLTLGERGSQLPAVLYKRAVEAMKD DYECVRKEALQLVFMLGNRHPDYILPSDRQQEELRMIDAAFSKVCEALCD LSLQIRVLAAELLGGMTAVSREFLHQTLDKKLMSNLRRKRTAHERGARLV ASGEWSSGKRWADDAPQEHLDAQSISIIASGACGALIHGLEDEFLEVRTA AVASMCKLALSRPDFAVTSLDFLVDMFNDEIEDVRLKAIYSLTAIAKHIV LREDQLEIMLGSLEDYSVDVREGLHLMLGACRVSTQTCLLMVVQKLLDVL AKYPQDRNSTYACMRKIGQKHPHLVMAVAVHLLYVHPFFETPERDVEDPA YLCVLILVFNAAEHLVPIISLLPTATHRHYAYLRDSMPNLVPQLPIEGAS SASATHRIDSAMHQAGSSAEYLQMILSHIEEIFTMTDERLELLQTAQSNL QRLGSIDAGMYGTSNFLETFLAAQIQIEQMQRCASTQRSRVPLKESLAAL IRNCLKLQHTFSGLNYGDILQVKQLRLRACALHLVLVVRDRSQSALGPCQ MLLQTAGDISEFIKANTKDEEEKPPVVETDMPMKESVSRDAQPDSFTRQL LIKLDGISDPKPGRVFREILPLVQQAPPLALPPANDKIRRCVANILEPCP LQSQDNVIKVTAGLIAAVPFVAEIDNLLESQKADMRIKIKYPDQHMHTVV PKQSDFKPIMTEQGEHKTNVRLRTTILLSHSVWTESSLVEIQLCLAVRPG SELELCKPAKVLFAPKPVRRGI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21815-PA | 1024 | GF21815-PA | 1..1024 | 1..1022 | 4591 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19041-PA | 1027 | GG19041-PA | 1..1027 | 1..1022 | 5133 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24735-PA | 1036 | GH24735-PA | 1..1036 | 1..1022 | 4273 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
IntS4-PA | 1022 | CG12113-PA | 1..1022 | 1..1022 | 5167 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14774-PA | 1004 | GI14774-PA | 1..1004 | 1..1022 | 4355 | 81 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22679-PA | 463 | GL22679-PA | 1..463 | 567..1022 | 2086 | 84.9 | Plus |
Dper\GL22668-PA | 472 | GL22668-PA | 15..450 | 39..459 | 1535 | 70 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11407-PA | 1025 | GA11407-PA | 1..1025 | 1..1022 | 4442 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21257-PA | 1004 | GM21257-PA | 1..1004 | 1..1022 | 5248 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19026-PA | 261 | GD19026-PA | 1..257 | 1..257 | 1210 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18819-PA | 1004 | GJ18819-PA | 1..1004 | 1..1022 | 4393 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25115-PA | 1056 | GK25115-PA | 1..1056 | 1..1022 | 4399 | 80.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17446-PA | 1025 | GE17446-PA | 1..1025 | 1..1022 | 5140 | 94.8 | Plus |