BDGP Sequence Production Resources |
Search the DGRC for GH13256
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 132 |
Well: | 56 |
Vector: | pOT2 |
Associated Gene/Transcript | Thiolase-RA |
Protein status: | GH13256.pep: gold |
Preliminary Size: | 1610 |
Sequenced Size: | 1576 |
Gene | Date | Evidence |
---|---|---|
CG4581 | 2001-01-01 | Release 2 assignment |
CG4581 | 2001-11-08 | Blastp of sequenced clone |
CG4581 | 2003-01-01 | Sim4 clustering to Release 3 |
Thiolase | 2008-04-29 | Release 5.5 accounting |
Thiolase | 2008-08-15 | Release 5.9 accounting |
Thiolase | 2008-12-18 | 5.12 accounting |
1576 bp (1576 high quality bases) assembled on 2001-11-08
GenBank Submission: AY069124
> GH13256.complete AAAAGCGAGAAAAGAAATCAGAAAACTTTCGCAAGATGAGCCTTCAAAAT GTCTGCCGCAAGGGTAACGCCTTCAACCTGTTGAATGTCGCCAGGAAAGT TCAATGCCGCGCTCTATCGGCCGCTGTGGCGAATCCACAACCGAAGCAGA AGAACAGCCAGAATATCGTGCTCGTGGATGGAGTCCGCACACCCTTTCTG ACCTCCGGAACCACCTACTCCAAGCTGATGCCCCATGAACTGGCCAGGCA CTCGCTTTTGTCATTGCTGCAAAAGAACCGCCTGGACAAGGAGCTCATCG ACTACATCGTGTACGGCAGCGTCATCCAGGAGGTGAAGACCTCCAACATT GCCAGGGAGGCAGCCTTGGCAGCTGGATTCAGCAACAAGACACCTGCCCA CACCGTCACCATGGCCTGCATCAGTTCCAATGCGGCCATCACCACGGGCA TGGGTCTGATAGCCACCAACACCTACGATGTCATCGTTGCCGGCGGCGTG GAGTTCATGTCCGATGTGCCCATTCGCCACTCCCGCAAGATGCGCTCCCT GCTCCTGAAAGCCAACAAGGCAAAGACCCTGGGCCAGCGGCTGGCCCTGC TGTCCACCTTCAGGCCAGACTTCCTGGCCCCCGAGCTGCCCGCCGTTGCG GAGTTCTCCTCCGGCGAGACCATGGGACACTCGGCCGATCGCTTGGCATC CGCCTTCAACGTATCCCGGAGCGAGCAGGACGAGTACGCCCTGCGATCCC ACACACTGGCCAAGGAGGCCCAGGAGAAGGGCTACTTCACCGATCTGGTT CCCTTCAAGGTGTCCGGCGTGGACCAGATCGTGGACAAGGACAACGGCAT CCGCGTGTCTAGTCCCGAGAGCCTGGCAAAGCTGAGGCCCGCCTTTGTGA AGCCCTACGGCACTGTGACAGCAGCCAACGCCTCCTTCCTCACGGACGGA GCTTCTGCTTGCATTATCATGACCGAGGAGAAGGCCAAGCAGCTGGGCCT CAAGCCCAAGGCCTATCTGCGCGACTTCCTGTTCGTGTCGCAGGATCCCG TCAACCAGCTGCTGCTGGGACCCGCCTACGGAATTCCCAAGCTGCTCAAG AAGGCTGGACTCACGCTGAAGGACATTGACTCGTGGGAGATCCACGAGGC GTTCGCCGGACAGATCGTGGCCAATCTGAAGGCCCTGGACTCCGACTGGT TCTGCAAGACTTACTTGGGCCTGAACGAGAAGGTCGGCACTCCCGACCTG TCCAAGTGGAACAACTGGGGCGGTTCTCTGTCCATCGGCCACCCCTTCGC CGCCACAGGAGTCCGCCTCTGCATGCACACCGCCAACCGCCTGGTGCGCG AGGATGGCAAGTTGGGCGTGGTCGCCGCCTGCGCGGCCGGTGGACAGGGC GTGGCTATGCTCATTGAGCGCTATCCGGGCGCCACAGCCGACTGAAATCG CCAATTAATCGACAAGGAGGAGAGTGCAGTTTAACTGCGAGATTGCTAGC TTTTATACACCTTACAACTACGTCTATACGAATAAAGAAATCTGAATTTT AAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Thiolase-RA | 1654 | Thiolase-RA | 58..1613 | 1..1556 | 7765 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 19752691..19753807 | 1550..434 | 5555 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 19753862..19754037 | 435..260 | 880 | 100 | Minus |
chr2R | 21145070 | chr2R | 19754094..19754257 | 261..98 | 820 | 100 | Minus |
chr2R | 21145070 | chr2R | 19754505..19754603 | 99..1 | 495 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 23866642..23867764 | 1556..434 | 5600 | 99.9 | Minus |
2R | 25286936 | 2R | 23867819..23867994 | 435..260 | 880 | 100 | Minus |
2R | 25286936 | 2R | 23868051..23868214 | 261..98 | 820 | 100 | Minus |
2R | 25286936 | 2R | 23868462..23868560 | 99..1 | 495 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 23867841..23868963 | 1556..434 | 5600 | 99.9 | Minus |
2R | 25260384 | 2R | 23869018..23869193 | 435..260 | 880 | 100 | Minus |
2R | 25260384 | 2R | 23869250..23869413 | 261..98 | 820 | 100 | Minus |
2R | 25260384 | 2R | 23869661..23869759 | 99..1 | 495 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19752691..19753806 | 435..1550 | 99 | <- | Minus |
chr2R | 19753863..19754037 | 260..434 | 100 | <- | Minus |
chr2R | 19754096..19754255 | 100..259 | 100 | <- | Minus |
chr2R | 19754505..19754603 | 1..99 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Thiolase-RA | 1..1410 | 36..1445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Thiolase-RA | 1..1410 | 36..1445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Thiolase-RA | 1..1410 | 36..1445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Thiolase-RA | 1..1410 | 36..1445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Thiolase-RA | 1..1410 | 36..1445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Thiolase-RA | 57..1606 | 1..1550 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Thiolase-RA | 57..1606 | 1..1550 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Thiolase-RA | 44..1593 | 1..1550 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Thiolase-RA | 57..1606 | 1..1550 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Thiolase-RA | 44..1593 | 1..1550 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23866648..23867763 | 435..1550 | 100 | <- | Minus |
2R | 23867820..23867994 | 260..434 | 100 | <- | Minus |
2R | 23868053..23868212 | 100..259 | 100 | <- | Minus |
2R | 23868462..23868560 | 1..99 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23866648..23867763 | 435..1550 | 100 | <- | Minus |
2R | 23867820..23867994 | 260..434 | 100 | <- | Minus |
2R | 23868053..23868212 | 100..259 | 100 | <- | Minus |
2R | 23868462..23868560 | 1..99 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23866648..23867763 | 435..1550 | 100 | <- | Minus |
2R | 23867820..23867994 | 260..434 | 100 | <- | Minus |
2R | 23868053..23868212 | 100..259 | 100 | <- | Minus |
2R | 23868462..23868560 | 1..99 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19754171..19755286 | 435..1550 | 100 | <- | Minus |
arm_2R | 19755343..19755517 | 260..434 | 100 | <- | Minus |
arm_2R | 19755576..19755735 | 100..259 | 100 | <- | Minus |
arm_2R | 19755985..19756083 | 1..99 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23869037..23869211 | 260..434 | 100 | <- | Minus |
2R | 23869270..23869429 | 100..259 | 100 | <- | Minus |
2R | 23869679..23869777 | 1..99 | 100 | Minus | |
2R | 23867865..23868980 | 435..1550 | 100 | <- | Minus |
Translation from 2 to 1444
> GH13256.hyp KREKKSENFRKMSLQNVCRKGNAFNLLNVARKVQCRALSAAVANPQPKQK NSQNIVLVDGVRTPFLTSGTTYSKLMPHELARHSLLSLLQKNRLDKELID YIVYGSVIQEVKTSNIAREAALAAGFSNKTPAHTVTMACISSNAAITTGM GLIATNTYDVIVAGGVEFMSDVPIRHSRKMRSLLLKANKAKTLGQRLALL STFRPDFLAPELPAVAEFSSGETMGHSADRLASAFNVSRSEQDEYALRSH TLAKEAQEKGYFTDLVPFKVSGVDQIVDKDNGIRVSSPESLAKLRPAFVK PYGTVTAANASFLTDGASACIIMTEEKAKQLGLKPKAYLRDFLFVSQDPV NQLLLGPAYGIPKLLKKAGLTLKDIDSWEIHEAFAGQIVANLKALDSDWF CKTYLGLNEKVGTPDLSKWNNWGGSLSIGHPFAATGVRLCMHTANRLVRE DGKLGVVAACAAGGQGVAMLIERYPGATAD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Thiolase-PA | 469 | CG4581-PA | 1..469 | 12..480 | 2385 | 100 | Plus |
CG9149-PA | 392 | CG9149-PA | 3..390 | 54..473 | 446 | 30 | Plus |
CG10932-PB | 410 | CG10932-PB | 25..409 | 55..473 | 441 | 29.1 | Plus |
CG10932-PA | 410 | CG10932-PA | 25..409 | 55..473 | 441 | 29.1 | Plus |
yip2-PA | 398 | CG4600-PA | 5..396 | 52..472 | 400 | 32.1 | Plus |
Translation from 35 to 1444
> GH13256.pep MSLQNVCRKGNAFNLLNVARKVQCRALSAAVANPQPKQKNSQNIVLVDGV RTPFLTSGTTYSKLMPHELARHSLLSLLQKNRLDKELIDYIVYGSVIQEV KTSNIAREAALAAGFSNKTPAHTVTMACISSNAAITTGMGLIATNTYDVI VAGGVEFMSDVPIRHSRKMRSLLLKANKAKTLGQRLALLSTFRPDFLAPE LPAVAEFSSGETMGHSADRLASAFNVSRSEQDEYALRSHTLAKEAQEKGY FTDLVPFKVSGVDQIVDKDNGIRVSSPESLAKLRPAFVKPYGTVTAANAS FLTDGASACIIMTEEKAKQLGLKPKAYLRDFLFVSQDPVNQLLLGPAYGI PKLLKKAGLTLKDIDSWEIHEAFAGQIVANLKALDSDWFCKTYLGLNEKV GTPDLSKWNNWGGSLSIGHPFAATGVRLCMHTANRLVREDGKLGVVAACA AGGQGVAMLIERYPGATAD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12060-PA | 470 | GF12060-PA | 1..470 | 1..469 | 2410 | 95.3 | Plus |
Dana\GF21242-PA | 414 | GF21242-PA | 29..413 | 44..462 | 436 | 29.3 | Plus |
Dana\GF24451-PA | 392 | GF24451-PA | 3..390 | 43..462 | 426 | 29.5 | Plus |
Dana\GF15724-PA | 398 | GF15724-PA | 5..396 | 41..461 | 413 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19986-PA | 469 | GG19986-PA | 1..469 | 1..469 | 2470 | 98.1 | Plus |
Dere\GG14778-PA | 392 | GG14778-PA | 3..390 | 43..462 | 454 | 30.1 | Plus |
Dere\GG17603-PA | 410 | GG17603-PA | 25..409 | 44..462 | 444 | 29.3 | Plus |
Dere\GG10063-PA | 398 | GG10063-PA | 5..396 | 41..461 | 409 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20195-PA | 405 | GH20195-PA | 1..405 | 65..469 | 2022 | 90.6 | Plus |
Dgri\GH17897-PA | 409 | GH17897-PA | 19..408 | 39..462 | 456 | 29.7 | Plus |
Dgri\GH15449-PA | 392 | GH15449-PA | 3..390 | 43..462 | 443 | 30.1 | Plus |
Dgri\GH11301-PA | 398 | GH11301-PA | 5..396 | 41..461 | 416 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Thiolase-PA | 469 | CG4581-PA | 1..469 | 1..469 | 2385 | 100 | Plus |
CG9149-PA | 392 | CG9149-PA | 3..390 | 43..462 | 446 | 30 | Plus |
CG10932-PB | 410 | CG10932-PB | 25..409 | 44..462 | 441 | 29.1 | Plus |
CG10932-PA | 410 | CG10932-PA | 25..409 | 44..462 | 441 | 29.1 | Plus |
yip2-PA | 398 | CG4600-PA | 5..396 | 41..461 | 400 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20722-PA | 469 | GI20722-PA | 1..469 | 1..469 | 2227 | 87.8 | Plus |
Dmoj\GI13050-PA | 392 | GI13050-PA | 3..390 | 43..462 | 500 | 32.7 | Plus |
Dmoj\GI15420-PA | 408 | GI15420-PA | 22..407 | 43..462 | 450 | 28.5 | Plus |
Dmoj\GI17721-PA | 398 | GI17721-PA | 5..396 | 41..461 | 432 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10924-PA | 471 | GL10924-PA | 1..471 | 1..469 | 2381 | 94.1 | Plus |
Dper\GL16175-PA | 392 | GL16175-PA | 3..390 | 43..462 | 486 | 32.5 | Plus |
Dper\GL14584-PA | 412 | GL14584-PA | 25..411 | 42..462 | 435 | 28.5 | Plus |
Dper\GL18942-PA | 398 | GL18942-PA | 5..396 | 41..461 | 411 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18273-PA | 471 | GA18273-PA | 1..471 | 1..469 | 2381 | 94.1 | Plus |
Dpse\GA21576-PA | 392 | GA21576-PA | 3..390 | 43..462 | 484 | 32.5 | Plus |
Dpse\GA10651-PA | 412 | GA10651-PA | 25..411 | 42..462 | 434 | 28.5 | Plus |
Dpse\GA18290-PA | 398 | GA18290-PA | 5..396 | 41..461 | 411 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15500-PA | 469 | GM15500-PA | 1..469 | 1..469 | 2491 | 99.1 | Plus |
Dsec\GM14397-PA | 392 | GM14397-PA | 3..390 | 43..462 | 449 | 29.7 | Plus |
Dsec\GM11967-PA | 410 | GM11967-PA | 25..409 | 44..462 | 444 | 29.1 | Plus |
Dsec\GM17755-PA | 398 | GM17755-PA | 5..396 | 41..461 | 413 | 32.8 | Plus |
Dsec\GM12955-PA | 311 | GM12955-PA | 3..299 | 43..354 | 303 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25003-PA | 469 | GD25003-PA | 1..469 | 1..469 | 2491 | 99.1 | Plus |
Dsim\GD13606-PA | 392 | GD13606-PA | 3..390 | 43..462 | 448 | 29.7 | Plus |
Dsim\GD24579-PA | 410 | GD24579-PA | 25..409 | 44..462 | 442 | 29.1 | Plus |
Dsim\GD23636-PA | 397 | GD23636-PA | 29..395 | 66..461 | 412 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20459-PA | 443 | GJ20459-PA | 8..443 | 35..469 | 2185 | 92 | Plus |
Dvir\GJ12146-PA | 392 | GJ12146-PA | 3..390 | 43..462 | 469 | 31.1 | Plus |
Dvir\GJ16378-PA | 408 | GJ16378-PA | 22..407 | 43..462 | 452 | 30 | Plus |
Dvir\GJ17549-PA | 398 | GJ17549-PA | 5..396 | 41..461 | 425 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15863-PA | 473 | GK15863-PA | 1..473 | 1..469 | 2317 | 90.9 | Plus |
Dwil\GK20386-PA | 392 | GK20386-PA | 3..390 | 43..462 | 470 | 31.1 | Plus |
Dwil\GK10115-PA | 413 | GK10115-PA | 27..412 | 43..462 | 430 | 28.5 | Plus |
Dwil\GK18280-PA | 398 | GK18280-PA | 5..396 | 41..461 | 405 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11519-PA | 469 | GE11519-PA | 1..469 | 1..469 | 2476 | 98.3 | Plus |
Dyak\GE21141-PA | 392 | GE21141-PA | 3..390 | 43..462 | 453 | 29.9 | Plus |
Dyak\GE17503-PA | 410 | GE17503-PA | 25..409 | 44..462 | 440 | 29.3 | Plus |
Dyak\yip2-PA | 398 | GE18877-PA | 5..396 | 41..461 | 417 | 32.7 | Plus |