Clone GH13257 Report

Search the DGRC for GH13257

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:132
Well:57
Vector:pOT2
Associated Gene/TranscriptCG17010-RA
Protein status:GH13257.pep: gold
Preliminary Size:1440
Sequenced Size:1404

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17010 2001-01-01 Release 2 assignment
CG6319 2001-01-01 Release 2 assignment
CG17010 2003-08-11 Blastp of sequenced clone
CG17010 2008-04-29 Release 5.5 accounting
CG17010 2008-08-15 Release 5.9 accounting
CG17010 2008-12-18 5.12 accounting

Clone Sequence Records

GH13257.complete Sequence

1404 bp assembled on 2006-11-09

GenBank Submission: BT011149

> GH13257.complete
ATTTTTCCCCCAACCAAAATCTCTGTTAAGTTTTGTTCAAAATTTCCGGC
TTACGCAGCCCTTTCAAATGGGAAAGAAGCTGGATGTGGTTGTCTTCGGG
ACGGCAAACATCGAATATATAACATATGTCCCGGAATTGCCGAAACCCGG
TGAACTTGTCGCCGGAACGTACATGGAGACCTGTTTCGGTGGCAAGGGAG
CCAATCAGTGTGTGGCAGCTGCCAAATTGGGGGCCTCCACCGTCCTGGTC
GCCAAGTTGGGCAAGGACGAATCGGGCGATGACTACCTAAACCACCTGCA
ACAGCACGAGGTTGATGTGACGCACGTCCAGCAGGTGGAGAACAATCCCA
CGGGCATGAGTGAAATCGCGGTTTCTGAGAATGGAGATCAGTACAAGATC
AACGTGGCTGGTGCGAATGTATTTCTCACGGCCAAGGATGTGACCCGGGC
TAAGAAGTCCTTTCAGGATGCGAAGGTGCTTCTCTGCCAACTGGAAACGG
ATATGAATGCCACCATGTGTGCGTTGCGTCAGTTCAAGGGGGTTTCCCTG
CTCCACATGTCGCCAATGCGAAAAGATATTCCAAATGCCATGATTGGCTT
GCCTACTATTCTGGTTGCGAATCAAGAGGCAGCTGCCAACCTAACCGATA
TGGAAGAAGTGTTAACCCCTGATCAGGCGCGAAAAGCAGCTGAAACTCTT
ATCGCAAAGGGAGCCAAGAGCGTGATCATTACCATGGGCGAGCAAGGAGC
CGTTTACATGTCCAAGAAGAGCAAAGATATGTGCACCCATGTGCCCGCCT
CCGATGTGCCGCACTTGGCCGATCCCTCGGGTGCCGGTGATGCCTTTATG
GGCAGCTTGGCCTATCACATAGCTCGATTTCCCAAACTGTCCACAGAACA
TCATATCAGTGCGGCACACTCCTGCGCCGCCTACTCCATGGGCCGCCGCG
GCACTCAGCCAAGTTTTCCGGGCAAGGAAAGCGCCAAAAGTGACCTATGC
TATTCGACGCCCACGTTTAGTGTCATTCCACCTTCTAGTCCGCAACATGA
AGATGATAATATGGTAACAAAGACGCCACCGCCTTCAATGGTAGTCCCTA
CGCCCGAAGAAGCACACTCCCAAAAGGAAGTTGTGGAAGAACCGCAAAAA
CCTGCACCTCCTCCACCGGAGGATCCGGTTGTGGAAGCACCTCCACCAAC
GACCTCCGAGGAACCTCCGAAAGCAGTGGAAACCTCCAATGAACCTCCAA
AGCCTGCGGAGACCACTGATGAACCTCCAAAGCCTGCGGAGACCGCAGAT
CAAGCTCCTGTGAAACCCGTGGAGACTGCTAATGAGCCACCTGCCAACAA
AGCATAACATTAAACTATTCGCATAGAAAATATTAAAAAAAAAAAAAAAA
AAAA

GH13257.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:12:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG17010-RA 1513 CG17010-RA 52..1438 1..1387 6935 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:16:38
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 12355277..12356537 124..1384 6290 99.9 Plus
chr2L 23010047 chr2L 12355101..12355223 1..123 615 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:48:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:16:36
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12356646..12357909 124..1387 6320 100 Plus
2L 23513712 2L 12356470..12356592 1..123 615 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:06:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12356646..12357909 124..1387 6320 100 Plus
2L 23513712 2L 12356470..12356592 1..123 615 100 Plus
Blast to na_te.dros performed on 2019-03-15 18:16:36 has no hits.

GH13257.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:17:15 Download gff for GH13257.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 12355101..12355223 1..123 100 -> Plus
chr2L 12355277..12356537 124..1384 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:40:07 Download gff for GH13257.complete
Subject Subject Range Query Range Percent Splice Strand
CG17010-RA 1..1290 68..1357 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:20:20 Download gff for GH13257.complete
Subject Subject Range Query Range Percent Splice Strand
CG17010-RA 1..1290 68..1357 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:59:13 Download gff for GH13257.complete
Subject Subject Range Query Range Percent Splice Strand
CG17010-RA 1..1290 68..1357 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:37:14 Download gff for GH13257.complete
Subject Subject Range Query Range Percent Splice Strand
CG17010-RA 1..1290 68..1357 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:58:35 Download gff for GH13257.complete
Subject Subject Range Query Range Percent Splice Strand
CG17010-RA 1..1290 68..1357 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:48:36 Download gff for GH13257.complete
Subject Subject Range Query Range Percent Splice Strand
CG17010-RA 30..1413 1..1384 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:20:20 Download gff for GH13257.complete
Subject Subject Range Query Range Percent Splice Strand
CG17010-RA 30..1413 1..1384 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:59:13 Download gff for GH13257.complete
Subject Subject Range Query Range Percent Splice Strand
CG17010-RA 30..1413 1..1384 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:37:14 Download gff for GH13257.complete
Subject Subject Range Query Range Percent Splice Strand
CG17010-RA 30..1413 1..1384 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:58:35 Download gff for GH13257.complete
Subject Subject Range Query Range Percent Splice Strand
CG17010-RA 30..1413 1..1384 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:17:15 Download gff for GH13257.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12356470..12356592 1..123 100 -> Plus
2L 12356646..12357906 124..1384 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:17:15 Download gff for GH13257.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12356470..12356592 1..123 100 -> Plus
2L 12356646..12357906 124..1384 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:17:15 Download gff for GH13257.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12356470..12356592 1..123 100 -> Plus
2L 12356646..12357906 124..1384 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:59:13 Download gff for GH13257.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12356470..12356592 1..123 100 -> Plus
arm_2L 12356646..12357906 124..1384 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:49:22 Download gff for GH13257.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12356470..12356592 1..123 100 -> Plus
2L 12356646..12357906 124..1384 100   Plus

GH13257.hyp Sequence

Translation from 1 to 1356

> GH13257.hyp
FFPQPKSLLSFVQNFRLTQPFQMGKKLDVVVFGTANIEYITYVPELPKPG
ELVAGTYMETCFGGKGANQCVAAAKLGASTVLVAKLGKDESGDDYLNHLQ
QHEVDVTHVQQVENNPTGMSEIAVSENGDQYKINVAGANVFLTAKDVTRA
KKSFQDAKVLLCQLETDMNATMCALRQFKGVSLLHMSPMRKDIPNAMIGL
PTILVANQEAAANLTDMEEVLTPDQARKAAETLIAKGAKSVIITMGEQGA
VYMSKKSKDMCTHVPASDVPHLADPSGAGDAFMGSLAYHIARFPKLSTEH
HISAAHSCAAYSMGRRGTQPSFPGKESAKSDLCYSTPTFSVIPPSSPQHE
DDNMVTKTPPPSMVVPTPEEAHSQKEVVEEPQKPAPPPPEDPVVEAPPPT
TSEEPPKAVETSNEPPKPAETTDEPPKPAETADQAPVKPVETANEPPANK
A*

GH13257.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:40:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG17010-PA 429 CG17010-PA 1..429 23..451 2239 100 Plus
CG13369-PA 304 CG13369-PA 5..302 28..323 685 48 Plus

GH13257.pep Sequence

Translation from 67 to 1356

> GH13257.pep
MGKKLDVVVFGTANIEYITYVPELPKPGELVAGTYMETCFGGKGANQCVA
AAKLGASTVLVAKLGKDESGDDYLNHLQQHEVDVTHVQQVENNPTGMSEI
AVSENGDQYKINVAGANVFLTAKDVTRAKKSFQDAKVLLCQLETDMNATM
CALRQFKGVSLLHMSPMRKDIPNAMIGLPTILVANQEAAANLTDMEEVLT
PDQARKAAETLIAKGAKSVIITMGEQGAVYMSKKSKDMCTHVPASDVPHL
ADPSGAGDAFMGSLAYHIARFPKLSTEHHISAAHSCAAYSMGRRGTQPSF
PGKESAKSDLCYSTPTFSVIPPSSPQHEDDNMVTKTPPPSMVVPTPEEAH
SQKEVVEEPQKPAPPPPEDPVVEAPPPTTSEEPPKAVETSNEPPKPAETT
DEPPKPAETADQAPVKPVETANEPPANKA*

GH13257.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:40:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14193-PA 519 GF14193-PA 1..327 1..326 1109 62.7 Plus
Dana\GF22103-PA 311 GF22103-PA 9..309 3..301 666 46.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:40:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12798-PA 304 GG12798-PA 5..302 6..301 711 47.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:40:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13082-PA 372 GH13082-PA 1..368 1..360 964 53.5 Plus
Dgri\GH12089-PA 306 GH12089-PA 6..301 6..301 704 49.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:00:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG17010-PA 429 CG17010-PA 1..429 1..429 2239 100 Plus
CG13369-PA 304 CG13369-PA 5..302 6..301 685 48 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:40:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21538-PA 437 GI21538-PA 2..318 4..320 883 52.7 Plus
Dmoj\GI21549-PA 1459 GI21549-PA 3..377 5..363 862 48.5 Plus
Dmoj\GI11097-PA 304 GI11097-PA 1..302 1..301 655 46.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:40:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21383-PA 318 GL21383-PA 1..219 1..219 505 47 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:40:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12236-PA 303 GA12236-PA 1..301 1..301 690 47.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:40:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19077-PA 304 GM19077-PA 5..302 6..301 717 48.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:41:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16516-PA 317 GD16516-PA 5..284 6..286 630 46.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:41:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17488-PA 376 GJ17488-PA 2..323 4..325 965 56.5 Plus
Dvir\GJ15781-PA 305 GJ15781-PA 1..303 1..301 704 47.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:41:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14853-PA 280 GK14853-PA 1..255 1..255 796 58.4 Plus
Dwil\GK25613-PA 310 GK25613-PA 6..305 5..301 625 44.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:41:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16624-PA 304 GE16624-PA 5..302 6..301 702 47.3 Plus