BDGP Sequence Production Resources |
Search the DGRC for GH13260
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 132 |
Well: | 60 |
Vector: | pOT2 |
Associated Gene/Transcript | su(r)-RC |
Protein status: | GH13260.pep: gold |
Sequenced Size: | 3392 |
Gene | Date | Evidence |
---|---|---|
su(r) | 2008-04-29 | Picked prior to 5.5 |
su(r) | 2008-08-15 | Release 5.9 accounting |
su(r) | 2008-12-18 | 5.12 accounting |
3392 bp assembled on 2008-05-16
GenBank Submission: BT032682
> GH13260.complete TGAAGACCAATTCGAATTTTTCGTGTTTTTTTTTTTAGTCGCCAAACCGT CGCCAGTCGATTTTCACTCCAGCTAGTGAATAGCTATTATTATTATTTTT TTTCGCTGTGCTAATCTAAAGATTCTAATAAAAAAAAGTGTTCATAAATT AGCTAATAACGTTCCTTCGATCGGTGAAACAGTGCCAGCAAGATGAGTCC GCCCCAACTTTTGAGCAAGGACTCCCCAGATATTGAGGACCTGCTGTCGC TAAATCCGCGAGTGAAGACGCAGTGCTCCGTGGTGCCCACCAAGCAGACG AAGGAGAACAAGAAGCACTGGAAACGCAATGCGGATCACGCTGCTCCGCC GTGCACCACGCTGGCCAACGACTTCTCGGACATCAAGCACACCACATTGT CGGAGCGCGGAGCTCTAGAGGAGGCGGCCAGGTGCCTCAAATGCGCCGAT GCTCCGTGCCAAAAGTCCTGTCCCACGCAGCTGGACATCAAGAGCTTCAT TACGAGCATTGCGAATAAGAATTTCTATGGCGCCGCCAAGGCGATCTTCT CCGACAATCCGCTGGGTCTGACCTGCGGCATGGTCTGTCCCACCAGCGAT CTCTGCGTGGGCGGTTGCAATCTGCAGGCCTCCGAGGCGGGACCGATTAA CATTGGTGGCCTCCAGCAGTTCGCCACCGAGGTGTTCAAGAAGATGGGCG TGCGGCAGCGGAGGACACCGCAGGCGGAGGCCAATCCGCTGTCGCAAAAG ATCGCCCTCGTGGGCGGCGGACCGGCATCGCTGTCGTGCGCCACCTTCCT GGCCCGTCTGGGCTATCGGGATGTGACCATCTACGAGCGGAGAAGCTATC TGGGTGGCCTGAGTGCCGCTGAAATTCCCCAGTATCGTCTGCCCATCGAT GCGGTTAACTTTGAGATCGATTTGGTTCGCGATCTGGGCGTACGCATCGA AACGGGTCGCTCGCTGGGCACCAAGGATTTGACCATCCAGGGACTCCTGT CCACCGGCCATGATGCCGTCTTTGTGGGCATTGGCCTGCCGGAACCGAAG CTGAATCCCATTTTCGCTGGCCTTCAGCCCAGCAATGGTTTCTACACCTC GAAAAACTTCCTGCCCTTGGTGTCGGATGGCTCGAAACCGGGTTTGTGCG CCTGCAAGGCAGCGGCCGGTTTACCCAAGCTCCATGGCAATGTCATCGTT TTGGGTGCCGGTGATACGGCCTTCGATTGCGCCACTTCGGCGCTGAGATG TGGTGCTAGGCGTGTGTTCGTCGTCTTCCGCAAAGGATCCTCCGGCATTC GTGCTGTGCCCGAAGAGGTGGAGCTGGCGCGTGACGAACGCTGTGAGCTG TTGCCGTACCTGAGTCCACGCAAAGTGATCGTCAAGGATGGCCTGATCAC AGCCATGGAATTCTGTCGCACGGAGCAGAACGAAAACGATGAATGGGTGG AGGATGAGGAGCAGACGCAGCGCTTGAAGGCGAACTTTGTGATCTCCGCC TTTGGGTCCGGCCTGGAGGATCAGGATGTCAAGGCGGCACTAGCGCCGTT GCAATTCCGCGGCGAATTGCCCGTGGTGGACAGGGTGACGATGCAGAGCA GTGTGAAACAGGTGTTCCTCGGCGGCGATCTCGCTGGAGTGGCCAACACC ACGGTGGAGTCGGTCAATGATGGCAAGGTGGCCGCCTGGAGCATTCATTG TCAACTGCAGGGCCTGCCACTGGACACGCCGGCTGCACTGCCGCTCTTCT ATACGGACATCGATGCCGTGGACATATCGGTGGAGATGTGCGGCATCCGG TTCGAGAATCCCTTTGGCCTGGCCTCCGCACCGCCCACCACCAGCACGGC CATGATACGTCGCGCCTTCGAGCAGGGCTGGGGCTTTGTGGTGACCAAGA CGTTCGGTCTGGACAAGGATCTGGTCACGAATGTCTCGCCGCGCATCGTC AGGGGCACCACGTCGGGCTACAAGTATGGACCGCAGCAGGGCTGTTTCCT GAACATCGAACTAATCTCGGAGAAGCGGGCCGAGTACTGGCTGAAATCGA TTGGAGAACTGAAGCGTGACTTCCCCGAGAAGATCGTGATAGCCAGCATT ATGTGCAGCTTCAACGAGGAAGACTGGACGGAGTTGGCCATTAAGGCGGA GCAGTCGGGTGCCGATGCCCTCGAGCTGAATCTATCGTGTCCACATGGCA TGGGCGAGCGAGGTATGGGCTTGGCCTGTGGCCAGGATCCCGAGTTGGTG GAGCAGATCTCTCGCTGGGTGCGAAAGGCGGTCAAGCTGCCCTTCTTCAT CAAGCTAACGCCAAACATTACGGATATCGTTTCCATTGCGGCGGCCGCAA AGCGGGGAGGAGCCGATGGCGGATCGGCCATCAACACCGTTCAGGGACTG ATGGGCCTCAAGGCGGACTCCACCGCCTGGCCGGCGATTGGCAAGGAGCA GCGCACCACTTACGGCGGCGTCTCCGGCAATGCCACTCGTCCGATGGCTC TGAAGGCCATCTCTGATATTGCCAACCGTGTGCCGGGATTCCCCATTCTC GGTATCGGTGGCATCGATTCCGGTGAGGTTGCGCTGCAGTTTATTCATGC GGGCGCCACTGTTCTGCAGATCTGCTCCTCCGTACAGAACCAGGACTTCA CCGTCATCGAGGACTATTGCACGGCACTGAAGGCACTGCTCTACCTGAAG GCGAATCCGCCACCAGTCGATGGTCCCTTCTGGGATGGCCAGTCACCACC CACGCCGGTCCATCAGAAGGGCAAGCCCGTTGTCCGTTTGACCGGCGAGG GCAAAGCCACGCTGGGTTTCTTTGGTCCCTACCAGCGGCAGCGCGACATC AAGATGGCCGAGCTGCGAAGTCAGAAGGGAGCTCTTTGGGATGCCGAGCA GGTGAAGGCCACTCCTCCGGCGTCCAATGGAGCACCCAATCCGGCACCAA GAATCAAGGATGTGATCGGAGCAGCGCTAGACAAGATCGGGTCATACAAC AAGCTGGATAACAAACAACAGAAGGTGGCGCTCATCGATGATGACATGTG CATAAACTGCGGAAAGTGCTATATGACCTGCGCCGATTCCGGCTACCAGG CCATCGAATTCGACAAGGACACCCACATTCCGCACGTGAACGACGATTGC ACGGGCTGCACACTCTGCGTCTCCGTTTGTCCCATCATCGACTGCATCAC CATGGTGCCCAAGAAGATTCCGCACGTGATCAAGCGAGGAGTCGAGGAGA AGATCTTCTACACCCACGCTCTCAGCCAGTGCCAGTAAAAGTCCCTAGTT CTACGCGAAATACCGATAGTAAATTCCAATCTATGTAATTCAATTAAATA CAAAACATGTTTCAAAAGCAGAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 9089079..9091886 | 3043..236 | 14040 | 100 | Minus |
chrX | 22417052 | chrX | 9093430..9093604 | 175..1 | 875 | 100 | Minus |
chrX | 22417052 | chrX | 9088619..9088789 | 3371..3201 | 855 | 100 | Minus |
chrX | 22417052 | chrX | 9088864..9089021 | 3200..3043 | 790 | 100 | Minus |
chrX | 22417052 | chrX | 9091943..9092008 | 238..173 | 330 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 9197268..9200075 | 3043..236 | 14040 | 100 | Minus |
X | 23542271 | X | 9201618..9201792 | 175..1 | 875 | 100 | Minus |
X | 23542271 | X | 9196806..9196978 | 3373..3201 | 865 | 100 | Minus |
X | 23542271 | X | 9197053..9197210 | 3200..3043 | 790 | 100 | Minus |
X | 23542271 | X | 9200132..9200197 | 238..173 | 330 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 9205366..9208173 | 3043..236 | 14040 | 100 | Minus |
X | 23527363 | X | 9209716..9209890 | 175..1 | 875 | 100 | Minus |
X | 23527363 | X | 9204904..9205076 | 3373..3201 | 865 | 100 | Minus |
X | 23527363 | X | 9205151..9205308 | 3200..3043 | 790 | 100 | Minus |
X | 23527363 | X | 9208230..9208295 | 238..173 | 330 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9093432..9093604 | 1..173 | 100 | Minus | |
chrX | 9088864..9089021 | 3043..3200 | 100 | <- | Minus |
chrX | 9089080..9091884 | 238..3042 | 100 | <- | Minus |
chrX | 9091944..9092007 | 174..237 | 100 | <- | Minus |
chrX | 9088619..9088789 | 3201..3371 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(r)-RC | 1..3096 | 193..3288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(r)-RC | 1..3096 | 193..3288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(r)-RC | 1..3096 | 193..3288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(r)-RC | 1..3096 | 193..3288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(r)-RC | 1..3096 | 193..3288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(r)-RC | 25..3395 | 1..3371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(r)-RC | 25..3395 | 1..3371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(r)-RC | 25..3395 | 1..3371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(r)-RC | 25..3395 | 1..3371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(r)-RC | 29..3399 | 1..3371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9197053..9197210 | 3043..3200 | 100 | <- | Minus |
X | 9196808..9196978 | 3201..3371 | 100 | <- | Minus |
X | 9197269..9200073 | 238..3042 | 100 | <- | Minus |
X | 9200133..9200196 | 174..237 | 100 | <- | Minus |
X | 9201620..9201792 | 1..173 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9197053..9197210 | 3043..3200 | 100 | <- | Minus |
X | 9196808..9196978 | 3201..3371 | 100 | <- | Minus |
X | 9197269..9200073 | 238..3042 | 100 | <- | Minus |
X | 9200133..9200196 | 174..237 | 100 | <- | Minus |
X | 9201620..9201792 | 1..173 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9197053..9197210 | 3043..3200 | 100 | <- | Minus |
X | 9196808..9196978 | 3201..3371 | 100 | <- | Minus |
X | 9197269..9200073 | 238..3042 | 100 | <- | Minus |
X | 9200133..9200196 | 174..237 | 100 | <- | Minus |
X | 9201620..9201792 | 1..173 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9090841..9091011 | 3201..3371 | 100 | <- | Minus |
arm_X | 9091086..9091243 | 3043..3200 | 100 | <- | Minus |
arm_X | 9091302..9094106 | 238..3042 | 100 | <- | Minus |
arm_X | 9094166..9094229 | 174..237 | 100 | <- | Minus |
arm_X | 9095653..9095825 | 1..173 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9204906..9205076 | 3201..3371 | 100 | <- | Minus |
X | 9205151..9205308 | 3043..3200 | 100 | <- | Minus |
X | 9205367..9208171 | 238..3042 | 100 | <- | Minus |
X | 9208231..9208294 | 174..237 | 100 | <- | Minus |
X | 9209718..9209890 | 1..173 | 100 | Minus |
Translation from 192 to 3287
> GH13260.pep MSPPQLLSKDSPDIEDLLSLNPRVKTQCSVVPTKQTKENKKHWKRNADHA APPCTTLANDFSDIKHTTLSERGALEEAARCLKCADAPCQKSCPTQLDIK SFITSIANKNFYGAAKAIFSDNPLGLTCGMVCPTSDLCVGGCNLQASEAG PINIGGLQQFATEVFKKMGVRQRRTPQAEANPLSQKIALVGGGPASLSCA TFLARLGYRDVTIYERRSYLGGLSAAEIPQYRLPIDAVNFEIDLVRDLGV RIETGRSLGTKDLTIQGLLSTGHDAVFVGIGLPEPKLNPIFAGLQPSNGF YTSKNFLPLVSDGSKPGLCACKAAAGLPKLHGNVIVLGAGDTAFDCATSA LRCGARRVFVVFRKGSSGIRAVPEEVELARDERCELLPYLSPRKVIVKDG LITAMEFCRTEQNENDEWVEDEEQTQRLKANFVISAFGSGLEDQDVKAAL APLQFRGELPVVDRVTMQSSVKQVFLGGDLAGVANTTVESVNDGKVAAWS IHCQLQGLPLDTPAALPLFYTDIDAVDISVEMCGIRFENPFGLASAPPTT STAMIRRAFEQGWGFVVTKTFGLDKDLVTNVSPRIVRGTTSGYKYGPQQG CFLNIELISEKRAEYWLKSIGELKRDFPEKIVIASIMCSFNEEDWTELAI KAEQSGADALELNLSCPHGMGERGMGLACGQDPELVEQISRWVRKAVKLP FFIKLTPNITDIVSIAAAAKRGGADGGSAINTVQGLMGLKADSTAWPAIG KEQRTTYGGVSGNATRPMALKAISDIANRVPGFPILGIGGIDSGEVALQF IHAGATVLQICSSVQNQDFTVIEDYCTALKALLYLKANPPPVDGPFWDGQ SPPTPVHQKGKPVVRLTGEGKATLGFFGPYQRQRDIKMAELRSQKGALWD AEQVKATPPASNGAPNPAPRIKDVIGAALDKIGSYNKLDNKQQKVALIDD DMCINCGKCYMTCADSGYQAIEFDKDTHIPHVNDDCTGCTLCVSVCPIID CITMVPKKIPHVIKRGVEEKIFYTHALSQCQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19101-PA | 1034 | GF19101-PA | 1..1034 | 1..1031 | 5058 | 90.7 | Plus |
Dana\GF10502-PA | 2125 | GF10502-PA | 1656..2112 | 60..509 | 235 | 24.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18994-PA | 1033 | GG18994-PA | 1..1033 | 1..1031 | 5374 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17755-PA | 1033 | GH17755-PA | 1..1033 | 1..1031 | 4693 | 84.1 | Plus |
Dgri\GH15220-PA | 2125 | GH15220-PA | 1652..2112 | 60..513 | 254 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
su(r)-PC | 1031 | CG2194-PC | 1..1031 | 1..1031 | 5408 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15089-PA | 1035 | GI15089-PA | 1..1035 | 1..1031 | 4852 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26798-PA | 393 | GL26798-PA | 1..393 | 637..1031 | 1783 | 83 | Plus |
Dper\GL26797-PA | 223 | GL26797-PA | 1..127 | 1..128 | 473 | 69.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15293-PA | 1027 | GA15293-PA | 1..1027 | 1..1031 | 4833 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13670-PA | 922 | GM13670-PA | 1..841 | 1..841 | 4272 | 96.4 | Plus |
Dsec\GM13670-PA | 922 | GM13670-PA | 842..922 | 951..1031 | 465 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16077-PA | 1031 | GD16077-PA | 1..1031 | 1..1031 | 5476 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18897-PA | 1031 | GJ18897-PA | 1..1031 | 1..1031 | 4836 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25544-PA | 1033 | GK25544-PA | 1..1033 | 1..1031 | 4817 | 86.1 | Plus |
Dwil\GK24771-PA | 1045 | GK24771-PA | 28..1038 | 7..1016 | 3129 | 59.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17405-PA | 1031 | GE17405-PA | 1..1031 | 1..1031 | 5408 | 98.1 | Plus |
Translation from 192 to 3287
> GH13260.hyp MSPPQLLSKDSPDIEDLLSLNPRVKTQCSVVPTKQTKENKKHWKRNADHA APPCTTLANDFSDIKHTTLSERGALEEAARCLKCADAPCQKSCPTQLDIK SFITSIANKNFYGAAKAIFSDNPLGLTCGMVCPTSDLCVGGCNLQASEAG PINIGGLQQFATEVFKKMGVRQRRTPQAEANPLSQKIALVGGGPASLSCA TFLARLGYRDVTIYERRSYLGGLSAAEIPQYRLPIDAVNFEIDLVRDLGV RIETGRSLGTKDLTIQGLLSTGHDAVFVGIGLPEPKLNPIFAGLQPSNGF YTSKNFLPLVSDGSKPGLCACKAAAGLPKLHGNVIVLGAGDTAFDCATSA LRCGARRVFVVFRKGSSGIRAVPEEVELARDERCELLPYLSPRKVIVKDG LITAMEFCRTEQNENDEWVEDEEQTQRLKANFVISAFGSGLEDQDVKAAL APLQFRGELPVVDRVTMQSSVKQVFLGGDLAGVANTTVESVNDGKVAAWS IHCQLQGLPLDTPAALPLFYTDIDAVDISVEMCGIRFENPFGLASAPPTT STAMIRRAFEQGWGFVVTKTFGLDKDLVTNVSPRIVRGTTSGYKYGPQQG CFLNIELISEKRAEYWLKSIGELKRDFPEKIVIASIMCSFNEEDWTELAI KAEQSGADALELNLSCPHGMGERGMGLACGQDPELVEQISRWVRKAVKLP FFIKLTPNITDIVSIAAAAKRGGADGGSAINTVQGLMGLKADSTAWPAIG KEQRTTYGGVSGNATRPMALKAISDIANRVPGFPILGIGGIDSGEVALQF IHAGATVLQICSSVQNQDFTVIEDYCTALKALLYLKANPPPVDGPFWDGQ SPPTPVHQKGKPVVRLTGEGKATLGFFGPYQRQRDIKMAELRSQKGALWD AEQVKATPPASNGAPNPAPRIKDVIGAALDKIGSYNKLDNKQQKVALIDD DMCINCGKCYMTCADSGYQAIEFDKDTHIPHVNDDCTGCTLCVSVCPIID CITMVPKKIPHVIKRGVEEKIFYTHALSQCQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
su(r)-PC | 1031 | CG2194-PC | 1..1031 | 1..1031 | 5408 | 100 | Plus |