BDGP Sequence Production Resources |
Search the DGRC for GH13304
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 133 |
Well: | 4 |
Vector: | pOT2 |
Associated Gene/Transcript | Pglym78-RA |
Protein status: | GH13304.pep: gold |
Preliminary Size: | 1479 |
Sequenced Size: | 1152 |
Gene | Date | Evidence |
---|---|---|
CG1721 | 2001-01-01 | Release 2 assignment |
CG1721 | 2001-07-04 | Blastp of sequenced clone |
CG1721 | 2003-01-01 | Sim4 clustering to Release 3 |
Pglym78 | 2008-04-29 | Release 5.5 accounting |
Pglym78 | 2008-08-15 | Release 5.9 accounting |
Pglym78 | 2008-12-18 | 5.12 accounting |
1152 bp (1152 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051464
> GH13304.complete CCGGAGTCCAATCAGAGAAGGCACCGCATCTGCGCACTACGTTTTTCCAA CAGAACGGCAATATCGCGGCCTGACAGCTGCGACCTTGGACGGCTCCCTT GTAGGTCAAACTTCAGCAGAATTCCCACATATTGCAGTCGCAGCAAGGCG GCAGCTTAAGAACGAGTACACAATTATCCGCAGAGTGATCAACGCAGCTA AAATGGGCGGCAAGTACAAGATCGTGATGGTGCGCCACGGCGAGTCCGAG TGGAACCAGAAGAATCAGTTCTGCGGCTGGTACGACGCCAACCTCAGCGA AAAGGGTCAGGAGGAGGCCCTAGCCGCCGGCAAGGCCGTCAAGGATGCCG GCCTGGAGTTCGATGTGGCCCACACCTCGGTGCTGACCCGCGCCCAGGTG ACGCTGGCCAGCATCCTGAAGGCCAGTGGCCACAAGGAGATCCCCATCCA GAAGACTTGGCGCCTGAACGAGCGCCACTACGGTGGACTCACTGGCCTGA ACAAGGCCGAGACCGCCGCCAAGTACGGCGAGGCCCAGGTGCAGATCTGG CGTCGCAGCTTCGACACCCCGCCACCACCGATGGAGCCGGGCCATCCGTA CTACGAGAACATCGTCAAGGATCCCCGCTACGCCGAGGGTCCCAAGCCCG AGGAGTTCCCCCAGTTCGAGTCCCTCAAGCTGACCATCGAACGCACACTG CCCTACTGGAACGACGTCATCATTCCCCAGATGAAGGAGGGCAAGCGCAT CCTGATCGCTGCCCACGGCAACAGCCTCCGTGGCATCGTCAAGCATTTAG ACAACCTTTCTGAGGACGCCATCATGGCCCTAAATCTGCCCACGGGCATT CCGTTCGTCTACGAGCTGGACGAGAACTTCAAGCCGGTGGTGTCCATGCA GTTCCTCGGCGACGAGGAGACCGTGAAGAAGGCCATCGAGGCTGTGGCCG CCCAGGGCAAGGCCAAGTAAGCACGCAGGCCACACCTCATGAGAATCCAC TCAAATACGGCACAAGTCAGAGCATTCTGATTACGCTTCTGTTCAAGATG TAGCCAATCCCATTCGTTGTTGTTGTTCGCGTAGCAGTAATTGGTTCATC CCCACTACAGTTAATAAATAATTTATTATTACACTCAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 24971882..24972380 | 305..803 | 2465 | 99.6 | Plus |
chr3R | 27901430 | chr3R | 24972440..24972772 | 804..1136 | 1635 | 99.4 | Plus |
chr3R | 27901430 | chr3R | 24971107..24971413 | 1..307 | 1490 | 99 | Plus |
chr3R | 27901430 | chr3R | 8057195..8057954 | 968..209 | 1220 | 77.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 29149008..29149506 | 305..803 | 2495 | 100 | Plus |
3R | 32079331 | 3R | 29149569..29149903 | 804..1138 | 1675 | 100 | Plus |
3R | 32079331 | 3R | 29148248..29148554 | 1..307 | 1535 | 100 | Plus |
3R | 32079331 | 3R | 12231801..12232560 | 968..209 | 1220 | 77.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 28889839..28890337 | 305..803 | 2495 | 100 | Plus |
3R | 31820162 | 3R | 28890400..28890734 | 804..1138 | 1675 | 100 | Plus |
3R | 31820162 | 3R | 28889079..28889385 | 1..307 | 1535 | 100 | Plus |
3R | 31820162 | 3R | 11972632..11972956 | 968..644 | 665 | 80.3 | Minus |
3R | 31820162 | 3R | 11973198..11973391 | 402..209 | 400 | 80.4 | Minus |
3R | 31820162 | 3R | 11973014..11973142 | 586..458 | 330 | 83.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 24971107..24971411 | 1..305 | 99 | -> | Plus |
chr3R | 24971883..24972380 | 306..803 | 99 | -> | Plus |
chr3R | 24972440..24972740 | 804..1104 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym78-RC | 1..768 | 203..970 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym78-RC | 1..768 | 203..970 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym78-RA | 1..768 | 203..970 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym78-RC | 1..768 | 203..970 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym78-RA | 1..768 | 203..970 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym78-RA | 1..1136 | 1..1136 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym78-RA | 1..1136 | 1..1136 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym78-RA | 1..1136 | 1..1136 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym78-RA | 1..1136 | 1..1136 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pglym78-RA | 1..1136 | 1..1136 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29148248..29148552 | 1..305 | 100 | -> | Plus |
3R | 29149009..29149506 | 306..803 | 100 | -> | Plus |
3R | 29149569..29149901 | 804..1136 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29148248..29148552 | 1..305 | 100 | -> | Plus |
3R | 29149009..29149506 | 306..803 | 100 | -> | Plus |
3R | 29149569..29149901 | 804..1136 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29148248..29148552 | 1..305 | 100 | -> | Plus |
3R | 29149009..29149506 | 306..803 | 100 | -> | Plus |
3R | 29149569..29149901 | 804..1136 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 24973970..24974274 | 1..305 | 100 | -> | Plus |
arm_3R | 24974731..24975228 | 306..803 | 100 | -> | Plus |
arm_3R | 24975291..24975623 | 804..1136 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28889079..28889383 | 1..305 | 100 | -> | Plus |
3R | 28889840..28890337 | 306..803 | 100 | -> | Plus |
3R | 28890400..28890732 | 804..1136 | 100 | Plus |
Translation from 1 to 969
> GH13304.hyp RSPIREGTASAHYVFPTERQYRGLTAATLDGSLVGQTSAEFPHIAVAARR QLKNEYTIIRRVINAAKMGGKYKIVMVRHGESEWNQKNQFCGWYDANLSE KGQEEALAAGKAVKDAGLEFDVAHTSVLTRAQVTLASILKASGHKEIPIQ KTWRLNERHYGGLTGLNKAETAAKYGEAQVQIWRRSFDTPPPPMEPGHPY YENIVKDPRYAEGPKPEEFPQFESLKLTIERTLPYWNDVIIPQMKEGKRI LIAAHGNSLRGIVKHLDNLSEDAIMALNLPTGIPFVYELDENFKPVVSMQ FLGDEETVKKAIEAVAAQGKAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pglym78-PC | 255 | CG1721-PC | 1..255 | 68..322 | 1345 | 100 | Plus |
Pglym78-PB | 255 | CG1721-PB | 1..255 | 68..322 | 1345 | 100 | Plus |
Pglym78-PA | 255 | CG1721-PA | 1..255 | 68..322 | 1345 | 100 | Plus |
Pglym87-PA | 292 | CG17645-PA | 36..292 | 66..322 | 1044 | 75.1 | Plus |
CG7059-PC | 253 | CG7059-PC | 6..252 | 73..319 | 501 | 41.4 | Plus |
Translation from 202 to 969
> GH13304.pep MGGKYKIVMVRHGESEWNQKNQFCGWYDANLSEKGQEEALAAGKAVKDAG LEFDVAHTSVLTRAQVTLASILKASGHKEIPIQKTWRLNERHYGGLTGLN KAETAAKYGEAQVQIWRRSFDTPPPPMEPGHPYYENIVKDPRYAEGPKPE EFPQFESLKLTIERTLPYWNDVIIPQMKEGKRILIAAHGNSLRGIVKHLD NLSEDAIMALNLPTGIPFVYELDENFKPVVSMQFLGDEETVKKAIEAVAA QGKAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23292-PA | 255 | GF23292-PA | 1..255 | 1..255 | 1344 | 98 | Plus |
Dana\GF17736-PA | 288 | GF17736-PA | 36..288 | 3..255 | 972 | 68.8 | Plus |
Dana\GF18444-PA | 265 | GF18444-PA | 18..265 | 6..253 | 514 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11648-PA | 255 | GG11648-PA | 1..255 | 1..255 | 1360 | 99.6 | Plus |
Dere\GG17149-PA | 292 | GG17149-PA | 42..292 | 5..255 | 1054 | 75.7 | Plus |
Dere\GG11129-PA | 267 | GG11129-PA | 15..266 | 1..252 | 540 | 42.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23221-PA | 255 | GH23221-PA | 1..255 | 1..255 | 1334 | 97.3 | Plus |
Dgri\GH14297-PA | 255 | GH14297-PA | 1..255 | 1..255 | 1334 | 97.3 | Plus |
Dgri\GH15422-PA | 247 | GH15422-PA | 1..247 | 9..255 | 968 | 69.2 | Plus |
Dgri\GH13344-PA | 265 | GH13344-PA | 18..264 | 6..252 | 524 | 41.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pglym78-PC | 255 | CG1721-PC | 1..255 | 1..255 | 1345 | 100 | Plus |
Pglym78-PB | 255 | CG1721-PB | 1..255 | 1..255 | 1345 | 100 | Plus |
Pglym78-PA | 255 | CG1721-PA | 1..255 | 1..255 | 1345 | 100 | Plus |
Pglym87-PA | 292 | CG17645-PA | 40..292 | 3..255 | 1042 | 75.9 | Plus |
CG7059-PC | 253 | CG7059-PC | 6..252 | 6..252 | 501 | 41.4 | Plus |
CG7059-PD | 262 | CG7059-PD | 15..261 | 6..252 | 501 | 41.4 | Plus |
CG7059-PA | 267 | CG7059-PA | 20..266 | 6..252 | 501 | 41.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23192-PA | 255 | GI23192-PA | 1..255 | 1..255 | 1249 | 96.1 | Plus |
Dmoj\GI10280-PA | 293 | GI10280-PA | 42..293 | 4..255 | 1070 | 75.4 | Plus |
Dmoj\GI22381-PA | 268 | GI22381-PA | 16..267 | 1..252 | 541 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23914-PA | 255 | GL23914-PA | 1..255 | 1..255 | 1328 | 96.9 | Plus |
Dper\GL21564-PA | 309 | GL21564-PA | 57..309 | 3..255 | 1036 | 73.9 | Plus |
Dper\GL24208-PA | 267 | GL24208-PA | 20..266 | 6..252 | 508 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14392-PA | 255 | GA14392-PA | 1..255 | 1..255 | 1328 | 96.9 | Plus |
Dpse\GA14593-PA | 290 | GA14593-PA | 38..290 | 3..255 | 1041 | 74.3 | Plus |
Dpse\GA20068-PA | 267 | GA20068-PA | 20..266 | 6..252 | 508 | 42.2 | Plus |
Dpse\GA20068-PB | 252 | GA20068-PB | 5..251 | 6..252 | 507 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12771-PA | 255 | GM12771-PA | 1..255 | 1..255 | 1358 | 99.6 | Plus |
Dsec\GM26030-PA | 292 | GM26030-PA | 40..292 | 3..255 | 1072 | 76.3 | Plus |
Dsec\GM26427-PA | 267 | GM26427-PA | 15..266 | 1..252 | 531 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20588-PA | 341 | GD20588-PA | 40..292 | 3..255 | 1056 | 74.7 | Plus |
Dsim\GD21420-PA | 429 | GD21420-PA | 1..112 | 1..112 | 598 | 99.1 | Plus |
Dsim\GD20944-PA | 267 | GD20944-PA | 15..266 | 1..252 | 528 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14508-PA | 255 | GJ14508-PA | 1..255 | 1..255 | 1326 | 96.9 | Plus |
Dvir\GJ11087-PA | 299 | GJ11087-PA | 48..299 | 4..255 | 1067 | 76.2 | Plus |
Dvir\GJ24414-PA | 265 | GJ24414-PA | 13..264 | 1..252 | 522 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11893-PA | 255 | GK11893-PA | 1..255 | 1..255 | 1330 | 96.9 | Plus |
Dwil\GK11561-PA | 287 | GK11561-PA | 34..287 | 3..255 | 1014 | 72.4 | Plus |
Dwil\GK14265-PA | 267 | GK14265-PA | 20..267 | 6..253 | 553 | 43.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Pglym78-PA | 255 | GE23839-PA | 1..255 | 1..255 | 1350 | 98.8 | Plus |
Dyak\GE24538-PA | 292 | GE24538-PA | 40..292 | 3..255 | 1056 | 75.1 | Plus |
Dyak\GE10295-PA | 253 | GE10295-PA | 1..252 | 1..252 | 524 | 41.3 | Plus |