BDGP Sequence Production Resources |
Search the DGRC for GH13461
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 134 |
Well: | 61 |
Vector: | pOT2 |
Associated Gene/Transcript | Treh-RA |
Protein status: | GH13461.pep: gold |
Preliminary Size: | 3201 |
Sequenced Size: | 2787 |
Gene | Date | Evidence |
---|---|---|
CG9364 | 2001-01-01 | Release 2 assignment |
CG9364 | 2001-07-04 | Blastp of sequenced clone |
CG9364 | 2003-01-01 | Sim4 clustering to Release 3 |
Treh | 2008-04-29 | Release 5.5 accounting |
Treh | 2008-08-15 | Release 5.9 accounting |
Treh | 2008-12-18 | 5.12 accounting |
2787 bp (2787 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051466
> GH13461.complete TAAGTTGCACGGTCGTGATTAGTCTCGTGGCGCTGCTCGAAGGCAAAAGA AGCAACCAGGCGTTACGGTGGATCGAAATTCGAATAATAATACGGCAGTG ATCAAATCGAGTGATAAATGCAAACAACGCATATTGACGTGATAAACAAG TGGCAAGAATAAACAAAACATTTTGGTCAAATTGAAATCTTCGCTTCGCG CCCGCAACCTTGCGAGAATCTCAACATATTTTGCGACATCAGGAAACAAC AGTCTTTGTCGCAATATGGCCTCTCCAGCGAATCCATCGAGCAATCACAA AATGAACGGAAATGGTAAAATCTACTGCGAGGGCAATCTGCTGCACACCA TCCAAACGGCAGTGCCCAAACTATTTGCGGATTCGAAAACGTTTGTGGAC ATGAAGCTGAACAATTCGCCCGACAAGACCCTCGAGGACTTTAATGCCAT GATGGAGGCCAAGAATCAGACGCCAAGCAGTGAGGATCTCAAGCAGTTTG TCGATAAGTACTTCAGTGCACCGGGCACCGAGCTTGAGAAATGGACGCCC ACCGACTGGAAGGAGAATCCCAGTTTCCTCGACCTGATCTCCGACCCAGA TCTGAAGCAATGGGGCGTCGAGCTGAATAGCATTTGGAAGGACTTGGGAC GCAAAATGAAGGACGAGGTGTCAAAGAATCCCGAATACTACTCAATCATT CCCGTGCCAAATCCAGTGATCGTGCCCGGCGGTCGTTTCATTGAGTTCTA CTACTGGGACTCCTACTGGATCATCCGTGGACTTCTCTACAGCCAGATGT TTGACACCGCGCGCGGCATGATTGAGAACTTCTTTTCCATTGTCAATCGG TTCGGTTTTATTCCAAACGGCGGTCGAGTCTACTACCACGGTCGCTCCCA GCCGCCACTTCTAACCGGTATGGTCAAGTCGTACGTGGACTTCACCAACG ATGACAAGTTCGCCATCGATGCCCTGGACACGCTGGAGCACGAGTTCGAG TTCTTTGTGAACAACCACAATGTCACGGTGAAGAATCACAGCCTGTGTGT GTACCGCGATTCGTCGTCCGGACCGCGACCAGAATCCTACCGAGAGGATG TGGAGACCGGCGAGGAGTTCCCCACGGATGAGGCCAAGGAACTGCATTAC AGTGAACTCAAGGCAGGCGCCGAATCGGGCATGGACTTTAGCTCGCGCTG GTTCATCTCACCGACTGGAACCAATGATGGCAACCGGAGCGCTCTGAGCA CCACCTCCATTGTGCCCGTCGACCTGAATGCCTATCTCTACTGGAACGCC AAGTTGATTGCCGAGTTCCATTCCAAAGCGGGCAACACCAAAAAGGTCAC CGAATACGAGACCAAGGCCGAGAAACTCCTTCTGGGTATCCAAGAAGTTT TGTGGAACGAGGAGGCCGGTGTCTGGTTGGACTACGATATGATTAACCAG AAGCCTCGCGATTACTACACGCCCACCAATCTATCTCCACTGTGGGTGAA GGCCTTCAACATTTCGGAGTCCGAAAAGATATCGGCTTCGGTTATGGCCT ACATTGAGAGGAACAAGCTGGACAGCTTCCCTGGCGGAGTTCCCAACACG CTGAGCTACACCGGAGAACAGTGGGATGCCCCCAATGTGTGGGCACCGAT GCAGTACATCCTGGTCGAGGGCCTAAACAACCTGAACACTCCCGAGGCCA AGAATATGTCACTGAAGTGGGCCACCAGGTGGGTGAAGACAAACTTTGCG GCGTTTAGCAAGGACAGGCACATGTACGAGAAGTACAACGCCGATGAGTT CGGAGTTGGAGGCGGCGGTGGCGAGTACGAGGTACAGACTGGATTCGGTT GGTCCAACGGTGTGATCATCGAGTGGCTGAGCAAGCACGGGCGCGACATT TCCATTGGATCCGGTTGTGGCTGCCTAGCAGGTGAAAAGCGGCAGTAGAA AGAATCTGTAGCCAGGCCAGAACGCAATCCATCAGACATCATTGTCAGCA TCATCACAGGCTCGAAGCCAAAGCTTATTCAAAAAATTGTATTTAGATAT TTGTATATTATTAAGGCTCCAATCAGAAGCGCTCATCAACTGCTCATCCT TAGGCTAAGAAAATGCTGTCTCTCTCGCTCTGCGCAATCTTTATACCTTT AAAAGCCGCTGTCTATAACCAATATCTGTACCGCGAACCATCGACATCTC GAGCCAAGCACCACGAACCACAGCACCACAGTTACAGCACCGCCAGGAAT CAAGATCTGAAGTCCGCCATCCGTCGAGCATCTGTGTACTGTCTGTTGTC CATGTAGTAAACCACGTCCAGTCCACGTTTGCACACTCGTGTGACTTGTC CAAATTCAAGAAATAAGAACGCAAAGAACGCTATCTATCAAGTTGAGGAT TCACGAGTAATCGTATGATGGGCATCGTGGGCGTGGCAGCTGTCACTATA GTTGCTCTGATAGCAGGTCGTGTTCTATGGTGAGACAATGTGTGCCAAAA CAAGACGTAATTGCTACTCAAGTAGTGTGATTCCCCCCTCCGTGTTTGTG CGTGTGTTGTGAAGTCTGTAGTTGCTAACGTTTTTCGTTGAGTGCGGAGA TTGCAGTATTAGTTTATCATTATTTGGTAGTTGAAGTGAGAGTTGTATAT ACTGAATTTATATGGGCATGCCCGAAATTGTTATTACGTTTTAATATTTA GCAAATACCTATACCAATCCTAGCTCCTCGCAACCAAATGAAGACACAAA TACAATTGTTAACAATAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 16971897..16973174 | 506..1783 | 6300 | 99.5 | Plus |
chr2R | 21145070 | chr2R | 16973237..16973865 | 1782..2410 | 3085 | 99.4 | Plus |
chr2R | 21145070 | chr2R | 16963302..16963620 | 1..315 | 1470 | 98.1 | Plus |
chr2R | 21145070 | chr2R | 16974385..16974668 | 2483..2766 | 1390 | 99.3 | Plus |
chr2R | 21145070 | chr2R | 16971647..16971837 | 315..505 | 940 | 99.5 | Plus |
chr2R | 21145070 | chr2R | 16974230..16974307 | 2407..2484 | 390 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 21085448..21086725 | 506..1783 | 6390 | 100 | Plus |
2R | 25286936 | 2R | 21086788..21087416 | 1782..2410 | 3145 | 100 | Plus |
2R | 25286936 | 2R | 21076825..21077139 | 1..315 | 1575 | 100 | Plus |
2R | 25286936 | 2R | 21087936..21088221 | 2483..2768 | 1430 | 100 | Plus |
2R | 25286936 | 2R | 21085197..21085387 | 315..505 | 955 | 100 | Plus |
2R | 25286936 | 2R | 21087781..21087858 | 2407..2484 | 390 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 21086647..21087924 | 506..1783 | 6390 | 100 | Plus |
2R | 25260384 | 2R | 21087987..21088615 | 1782..2410 | 3145 | 100 | Plus |
2R | 25260384 | 2R | 21078024..21078338 | 1..315 | 1575 | 100 | Plus |
2R | 25260384 | 2R | 21089135..21089420 | 2483..2768 | 1430 | 100 | Plus |
2R | 25260384 | 2R | 21086396..21086586 | 315..505 | 955 | 100 | Plus |
2R | 25260384 | 2R | 21088980..21089057 | 2407..2484 | 390 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 16963302..16963620 | 1..315 | 98 | -> | Plus |
chr2R | 16971648..16971837 | 316..505 | 99 | -> | Plus |
chr2R | 16971897..16973174 | 506..1783 | 99 | -> | Plus |
chr2R | 16973239..16973861 | 1784..2406 | 99 | -> | Plus |
chr2R | 16974230..16974307 | 2407..2484 | 100 | -> | Plus |
chr2R | 16974387..16974668 | 2485..2766 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Treh-RA | 1..1683 | 266..1948 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Treh-RA | 1..1683 | 266..1948 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Treh-RD | 1..1683 | 266..1948 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Treh-RA | 1..1683 | 266..1948 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Treh-RD | 1..1683 | 266..1948 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Treh-RA | 231..2996 | 1..2766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Treh-RA | 231..2996 | 1..2766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Treh-RD | 220..2985 | 1..2766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Treh-RA | 231..2996 | 1..2766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Treh-RD | 220..2985 | 1..2766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21076825..21077139 | 1..315 | 100 | -> | Plus |
2R | 21085198..21085387 | 316..505 | 100 | -> | Plus |
2R | 21085448..21086725 | 506..1783 | 100 | -> | Plus |
2R | 21086790..21087412 | 1784..2406 | 100 | -> | Plus |
2R | 21087781..21087858 | 2407..2484 | 100 | -> | Plus |
2R | 21087938..21088219 | 2485..2766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21076825..21077139 | 1..315 | 100 | -> | Plus |
2R | 21085198..21085387 | 316..505 | 100 | -> | Plus |
2R | 21085448..21086725 | 506..1783 | 100 | -> | Plus |
2R | 21086790..21087412 | 1784..2406 | 100 | -> | Plus |
2R | 21087781..21087858 | 2407..2484 | 100 | -> | Plus |
2R | 21087938..21088219 | 2485..2766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21076825..21077139 | 1..315 | 100 | -> | Plus |
2R | 21085198..21085387 | 316..505 | 100 | -> | Plus |
2R | 21085448..21086725 | 506..1783 | 100 | -> | Plus |
2R | 21086790..21087412 | 1784..2406 | 100 | -> | Plus |
2R | 21087781..21087858 | 2407..2484 | 100 | -> | Plus |
2R | 21087938..21088219 | 2485..2766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 16972703..16972892 | 316..505 | 100 | -> | Plus |
arm_2R | 16964330..16964644 | 1..315 | 100 | -> | Plus |
arm_2R | 16972953..16974230 | 506..1783 | 100 | -> | Plus |
arm_2R | 16974295..16974917 | 1784..2406 | 100 | -> | Plus |
arm_2R | 16975286..16975363 | 2407..2484 | 100 | -> | Plus |
arm_2R | 16975443..16975724 | 2485..2766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21078024..21078338 | 1..315 | 100 | -> | Plus |
2R | 21086397..21086586 | 316..505 | 100 | -> | Plus |
2R | 21086647..21087924 | 506..1783 | 100 | -> | Plus |
2R | 21087989..21088611 | 1784..2406 | 100 | -> | Plus |
2R | 21088980..21089057 | 2407..2484 | 100 | -> | Plus |
2R | 21089137..21089418 | 2485..2766 | 100 | Plus |
Translation from 265 to 1947
> GH13461.pep MASPANPSSNHKMNGNGKIYCEGNLLHTIQTAVPKLFADSKTFVDMKLNN SPDKTLEDFNAMMEAKNQTPSSEDLKQFVDKYFSAPGTELEKWTPTDWKE NPSFLDLISDPDLKQWGVELNSIWKDLGRKMKDEVSKNPEYYSIIPVPNP VIVPGGRFIEFYYWDSYWIIRGLLYSQMFDTARGMIENFFSIVNRFGFIP NGGRVYYHGRSQPPLLTGMVKSYVDFTNDDKFAIDALDTLEHEFEFFVNN HNVTVKNHSLCVYRDSSSGPRPESYREDVETGEEFPTDEAKELHYSELKA GAESGMDFSSRWFISPTGTNDGNRSALSTTSIVPVDLNAYLYWNAKLIAE FHSKAGNTKKVTEYETKAEKLLLGIQEVLWNEEAGVWLDYDMINQKPRDY YTPTNLSPLWVKAFNISESEKISASVMAYIERNKLDSFPGGVPNTLSYTG EQWDAPNVWAPMQYILVEGLNNLNTPEAKNMSLKWATRWVKTNFAAFSKD RHMYEKYNADEFGVGGGGGEYEVQTGFGWSNGVIIEWLSKHGRDISIGSG CGCLAGEKRQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11930-PA | 597 | GF11930-PA | 51..581 | 19..551 | 2139 | 75.8 | Plus |
Dana\GF13595-PA | 1239 | GF13595-PA | 7..546 | 8..547 | 1454 | 46.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22083-PA | 570 | GG22083-PA | 1..546 | 1..546 | 2789 | 96.2 | Plus |
Dere\GG20601-PA | 1035 | GG20601-PA | 16..547 | 16..548 | 1487 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21428-PA | 594 | GH21428-PA | 56..583 | 18..547 | 2056 | 72.6 | Plus |
Dgri\GH21235-PA | 807 | GH21235-PA | 13..557 | 11..553 | 1562 | 51.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Treh-PG | 560 | CG9364-PG | 1..560 | 1..560 | 3029 | 100 | Plus |
Treh-PA | 560 | CG9364-PA | 1..560 | 1..560 | 3029 | 100 | Plus |
Treh-PD | 560 | CG9364-PD | 1..560 | 1..560 | 3029 | 100 | Plus |
Treh-PE | 560 | CG9364-PE | 1..560 | 1..560 | 3029 | 100 | Plus |
Treh-PF | 596 | CG9364-PF | 54..596 | 18..560 | 2936 | 100 | Plus |
Treh-PC | 596 | CG9364-PC | 54..596 | 18..560 | 2936 | 100 | Plus |
Treh-PB | 515 | CG9364-PB | 1..515 | 46..560 | 2789 | 100 | Plus |
CG6262-PA | 1042 | CG6262-PA | 16..546 | 16..547 | 1479 | 49.7 | Plus |
CG6262-PB | 867 | CG6262-PB | 1..371 | 178..547 | 1039 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20651-PA | 544 | GI20651-PA | 1..541 | 13..557 | 2095 | 71.7 | Plus |
Dmoj\GI20520-PA | 1123 | GI20520-PA | 14..553 | 11..552 | 1548 | 52.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10148-PA | 131 | GL10148-PA | 1..78 | 1..80 | 278 | 66.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25091-PA | 557 | GA25091-PA | 1..557 | 1..560 | 2242 | 76.6 | Plus |
Dpse\GA25091-PB | 589 | GA25091-PB | 50..589 | 18..560 | 2182 | 77.2 | Plus |
Dpse\GA24461-PA | 752 | GA24461-PA | 16..557 | 15..553 | 1647 | 55 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21693-PA | 1046 | GM21693-PA | 16..547 | 16..548 | 1501 | 49.1 | Plus |
Dsec\GM15801-PA | 276 | GM15801-PA | 1..265 | 1..264 | 1336 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11560-PA | 596 | GD11560-PA | 54..596 | 18..560 | 2846 | 97.1 | Plus |
Dsim\GD11189-PA | 1047 | GD11189-PA | 16..547 | 16..548 | 1493 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20400-PA | 589 | GJ20400-PA | 50..589 | 18..560 | 2077 | 71.5 | Plus |
Dvir\GJ22372-PA | 1091 | GJ22372-PA | 14..547 | 11..546 | 1666 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23271-PA | 585 | GK23271-PA | 44..585 | 18..560 | 2093 | 74.1 | Plus |
Dwil\GK21695-PA | 695 | GK21695-PA | 18..549 | 15..547 | 1561 | 53.6 | Plus |
Dwil\GK21696-PA | 823 | GK21696-PA | 11..549 | 7..547 | 1510 | 50.6 | Plus |
Translation from 265 to 1947
> GH13461.hyp MASPANPSSNHKMNGNGKIYCEGNLLHTIQTAVPKLFADSKTFVDMKLNN SPDKTLEDFNAMMEAKNQTPSSEDLKQFVDKYFSAPGTELEKWTPTDWKE NPSFLDLISDPDLKQWGVELNSIWKDLGRKMKDEVSKNPEYYSIIPVPNP VIVPGGRFIEFYYWDSYWIIRGLLYSQMFDTARGMIENFFSIVNRFGFIP NGGRVYYHGRSQPPLLTGMVKSYVDFTNDDKFAIDALDTLEHEFEFFVNN HNVTVKNHSLCVYRDSSSGPRPESYREDVETGEEFPTDEAKELHYSELKA GAESGMDFSSRWFISPTGTNDGNRSALSTTSIVPVDLNAYLYWNAKLIAE FHSKAGNTKKVTEYETKAEKLLLGIQEVLWNEEAGVWLDYDMINQKPRDY YTPTNLSPLWVKAFNISESEKISASVMAYIERNKLDSFPGGVPNTLSYTG EQWDAPNVWAPMQYILVEGLNNLNTPEAKNMSLKWATRWVKTNFAAFSKD RHMYEKYNADEFGVGGGGGEYEVQTGFGWSNGVIIEWLSKHGRDISIGSG CGCLAGEKRQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Treh-PG | 560 | CG9364-PG | 1..560 | 1..560 | 3029 | 100 | Plus |
Treh-PA | 560 | CG9364-PA | 1..560 | 1..560 | 3029 | 100 | Plus |
Treh-PD | 560 | CG9364-PD | 1..560 | 1..560 | 3029 | 100 | Plus |
Treh-PE | 560 | CG9364-PE | 1..560 | 1..560 | 3029 | 100 | Plus |
Treh-PF | 596 | CG9364-PF | 54..596 | 18..560 | 2936 | 100 | Plus |