Clone GH13548 Report

Search the DGRC for GH13548

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:135
Well:48
Vector:pOT2
Associated Gene/Transcriptwit-RA
Protein status:GH13548.pep: gold
Preliminary Size:3906
Sequenced Size:4020

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10776 2001-01-01 Release 2 assignment
CG10776 2002-06-07 Blastp of sequenced clone
CG10776 2003-01-01 Sim4 clustering to Release 3
wit 2008-04-29 Release 5.5 accounting
wit 2008-08-15 Release 5.9 accounting
wit 2008-12-18 5.12 accounting

Clone Sequence Records

GH13548.complete Sequence

4020 bp (4020 high quality bases) assembled on 2002-06-07

GenBank Submission: AY119514

> GH13548.complete
TGCAACTTCTTTCGGTTATTTAAAACAAAAGAAATAAATAAGTAATACAA
CTTAAAGTGCAAGTGCAGTGGTTGAATAGCGCCCTGAATTAAGTCTCCTT
TTGGTTGTTCAAAATGCCGTAACATTATCGAGGAACCCGACAGTCATACG
CATCCAAAGTAAATTATACTGAAGGTGGTTTTGAAAAGGATTCCAGACAT
GAATTGGGCTATCTATCTTTTGTTGGCCCTGATCTCGCTGGGCAGAGCAA
CACCTGTTCCCAATCGCCAGTATAGCTGTATGAGCTACCAGGAGGACGAC
AACTCATTTCACGATGATGATGGCGATCAGGACTCTAGTGGCGAGCTGCA
GGAGCAGCAGGTGGAGTCCACTCCGATTCCGAGCGAGCCACATAGACGCA
CCTGCCCAGATGGCTACACTTTCTGTTTCACCATCTGGAACCAGACGGCC
AATGGAGCGCGGGTTGTTAAACAGGGTTGCTGGAAGGACAACACGGATCG
CACTTCCATTTGCAGCCAGTCGGAATGTACCAGCTCGGCTCCCACCTCGA
AGACCAGTTCTTTGTACTACTGTTGCTGTTCGGGAGGAGTGTGCAATGCC
CAATATTCCGTGGTCGAACCGGCACCTCTGGAACTGGGCTCCAATGAGGG
ACGGACTTCGATCACAAATCGGGCGACAGAAAAACAGCACCAGTCCTTTT
TGGCCAGTACAATGCTGGGCCTTGCCGGTGGACTCACAGCCCTCACAATC
GGCATCTTTCTGGCTGTTCAATATTGCCGCACGGCCAAGGAGAAGCCGGA
ACCGGAGGAGTCGCCTCTGGCACCATCGGGCCCTGGCTACAGTTCTAATC
TCAGGAATGTCGACAACATGAATTTGATCGGCATGCTGGGGAGCGGCAAG
TATGGAACTGTGATGAAGGGACTGCTCCACGATCAGGAGGTGGCGGTTAA
GATATATCCCGAAGAGCATCATCAGTACTATGTGAACGAGAGGAACATCT
ATGCCTTGCCTTTGATGGAGTGTCCTGCGCTGTTGAGCTATTTCGGCTAC
GATGAACGCTGTACCATGGACGGGCGAATGGAGTATCAACTGGTACTATC
ACTGGCTCCCCTCGGATGCCTCCAGGATTGGTTGATAGCCAATACCCTAA
CTTTCAGCGAATGCTGTGGAATGCTGCGGTCCATCACGCGTGGAATCTCG
CACCTGCACACGGAACTCCGACTGGGAGATCAGCATAAGCCCTGTGTGGC
TCATCGGGATATCAACACAAGGAATGTGTTGGTCCAAGCTGATCTCAGCT
GTTGCATTGCGGACTTTGGTTTCGCTCTCAAGGTGTTTGGCTCCAAGTAC
GAGTACAAGGGCGAGGTGGCCATGGCGGAAACGAAGAGCATCAATGAGGT
GGGCACCCTTCGCTACATGGCCCCAGAATTACTGGAAGGAGCTGTAAATC
TGCGGGATTGCGAAACCTCGCTGAAGCAAATGGATGTCTATGCCCTGGGC
CTGGTGCTGTGGGAAGTGGCTACCCGCTGCTCGGATTTCTATGCCCCTGG
TCAAGCAACACCTCCCTACAAAGCACCCTATGAGCAGGAGGTGGGCTCCC
ATCCCAGCTTTGATCAAATGCAGGCGTTGGTGGTGCGGCACAAGGCGCGT
CCCTTATTTCCCACCGGCTGGGGTGGAGGAGCAGCGGCTAAAGTGGTGCG
GGATACTTGCGAGGACTGTTGGGATCATGATGCGGATGCTAGGCTGACCT
CCCTGTGTGCCGAGGAGCGCATGCAGGAGATGTCGACTTTAAGGCCACGA
GCACAGGCTCAACCTTCCAGTCCACTGCTGAATACCAACAATCTGGTGGC
CAGTCCAACTGCGGAACAGGGAATAAATATCATAGCCACAACGACAACGG
CGGCTGCAGTCCATCACCAGATGAGCTCCGACACTACGGGACTTATACAG
CCACCTCCCAATCAGCAGATACCTCTAGCTGCCTTGGAACGGGAGAAGAA
TCATCTGAGCTACCCGCAACAGCAATTGCAGCCGTATCAGGGCAGGAATC
CCTGCCAGGAGCGCAATCTGGCACCTCTGACAATGCGAACTCCACCGGTT
CTTGTGGAGCGGAGCAAGAAGCACAGTTTCCAGACACAGCCTCAGGAGAA
CTCACTGTCTTGCTTGGAGCATGATGTGAGTGTGGAGGAGCTGATAGCCA
GCCATCAGCACCAGCAGCAAAAGAACACGATTGTAAGCACAGGTGGAAAT
GGCAATTCCTGCTTGGGTCAGGGATTTCCCAAGCAGCAGAACACGGATCA
AAAACTCCGGGGATGGCATGGAGTAAGAGCCCTGATCCACAAGAAACTTT
TTCGCAAAGAGCATGCCGAGGAGCTGTGTCGTCAGTTGCAGTTGGGCGAA
GAGAAGTCCAATCTGGTGACGGCTCTGCGTCGACCGAACAACCTGGATCT
TAATCCTCGCCTCGATAAACCTCCGCCGGATCAGCTGAGGAGTGCAGAGC
AACGGATGGGAACTCCCGCTCACATTGTACCCCGATCGCTGTCCAGCAGC
CTGATCAAGCACATCAACGGGACCACCAACAATAACTCCATCCAGAGTCA
TGGTAGCGAATTGCAGACCCTCACCCGTCCGGCTTCGAAGCGAAGACCAG
GTCACCTGCGCACCAACTCCCTGATGGCCACCACGGGTCAGGGTCCGCCG
ACGGAGCAGCAAATGCGTCGTCAGCACAGTCTGGAGGTATTCCGTGAGGT
ATTCAGCGGTCGGGGGAGCAGCGAGCGTTTGAGGGACCCCAGCGAGCGGG
TCAAGACGCCGGGAGATGTGCCACCATCCGTACGGAAAGCCAGGGCCAGC
AAGACACTGAGCTTGTACGACGATCGGATGATGGACTCCTCCCTGCTCAA
CATTCTCTAGCATGAGGAGGTTCTGCTGCTGGAGCTATAAACTAATCGAA
TGCAGCAGAACATCGATCCACACCCATATCTCATCCTTCATCGAACACAT
ATTCAACGATAGCCATAGAGCAGAAGACTTGAATCGCTTCCTGGAAAAGT
CTTCTCACAAATCAGAAGGATAAAGGAGTATTTTGTTTTCTACTCAAAAT
TCTCTTCGATTTCAAATCAAAGAAAGAAAAAAATCGTTATTATTTATCAG
GAAACATAGATACTGTCACAGAAATCACACATCATTATTTCTTAACTCGC
CTGGATTGATGATTTGAAATCGAAAGAACTTTGAGAAACTGAAAACACAT
AACAGGTCCTAGATACAATTATTTTTCGAACATAGTAGAAAGACAGTATG
TGTATATCTGAATGTATTTTTTCACCAATCATCCTAGCGTGTAGTGCGGC
AAACAACCAAAGTCCTTATAGGTTAGATCAGACTAGTATCGTACGAGTAT
CAGTATATAGCAGTATATAGCCTCACACACACACACTCACATATATTTTT
GACTTGATCTTGGACAAGAGCGAAACAGGTAGTAGTCTATATAGTTTGTA
TATGTGCGGTTTTCACTCGAGTCGAGCTTAAGGCAGGAAGGGAGTAGGGA
ATGAAGGGGATTGGTCGGACCACTTTTATAGAGCCATATATAGAAACGAA
CTGCATTACGAGTATATATTTAACTAAACATTGTACTGGAATATTTAGTC
AAGCATAATTACACACTAAAGACCCAGAATTGGGTTGTTATGCTGAAGCC
ATGTATACAAAAAGAAAGCACAAAATACTCGAAGAAAATATCTGGTTAAC
AATATAAGCAATCTTCTGTGGAATGACAACCCACATGCCCGTTGTTCGAG
TATTTGGCAACCCTATCTAGTATACCCCCCTTTGGATGAATTTTCGGTGA
ATGCCTTTTAGTCGTTCTCTTTAGTACTTAGACCAAAACACCCACAGCCT
TTCAATCACATAAAATGCAAGTCTAGTTATATATAATTTACACTAATTAT
AATTAATTATGAGCTAATTTAAAATAATTAATAAACGAATTATTTAAACG
TGAAAAAAAAAAAAAAAAAA

GH13548.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:52:07
Subject Length Description Subject Range Query Range Score Percent Strand
wit-RA 4289 wit-RA 282..4284 1..4003 20015 100 Plus
dib.a 2175 dib.a 1622..2175 4003..3450 2770 100 Minus
dib-RA 2022 dib-RA 1622..2022 4003..3603 2005 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:18:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 4063538..4065673 4002..1867 10680 100 Minus
chr3L 24539361 chr3L 4065732..4066557 1870..1045 4130 100 Minus
chr3L 24539361 chr3L 4066619..4067190 1046..475 2860 100 Minus
chr3L 24539361 chr3L 4067248..4067474 477..251 1135 100 Minus
chr3L 24539361 chr3L 4067545..4067700 250..95 780 100 Minus
chr3L 24539361 chr3L 4070795..4070888 94..1 470 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:49:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:18:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4064151..4066287 4003..1867 10685 100 Minus
3L 28110227 3L 4066346..4067171 1870..1045 4130 100 Minus
3L 28110227 3L 4067233..4067804 1046..475 2860 100 Minus
3L 28110227 3L 4067862..4068088 477..251 1135 100 Minus
3L 28110227 3L 4068159..4068314 250..95 780 100 Minus
3L 28110227 3L 4071409..4071502 94..1 470 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:24:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 4064151..4066287 4003..1867 10685 100 Minus
3L 28103327 3L 4066346..4067171 1870..1045 4130 100 Minus
3L 28103327 3L 4067233..4067804 1046..475 2860 100 Minus
3L 28103327 3L 4067862..4068088 477..251 1135 100 Minus
3L 28103327 3L 4068159..4068314 250..95 780 100 Minus
3L 28103327 3L 4071409..4071502 94..1 470 100 Minus
Blast to na_te.dros performed 2019-03-16 17:18:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 778..826 1733..1781 119 71.4 Plus

GH13548.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:19:23 Download gff for GH13548.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 4063614..4065670 1870..3926 100 <- Minus
chr3L 4065733..4066556 1046..1869 100 <- Minus
chr3L 4066620..4067189 476..1045 100 <- Minus
chr3L 4067250..4067474 251..475 100 <- Minus
chr3L 4067545..4067700 95..250 100 <- Minus
chr3L 4070795..4070888 1..94 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:40:32 Download gff for GH13548.complete
Subject Subject Range Query Range Percent Splice Strand
wit-RA 1..2712 199..2910 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:28:49 Download gff for GH13548.complete
Subject Subject Range Query Range Percent Splice Strand
wit-RA 1..2712 199..2910 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:54:18 Download gff for GH13548.complete
Subject Subject Range Query Range Percent Splice Strand
wit-RB 1..2742 199..2940 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:19:10 Download gff for GH13548.complete
Subject Subject Range Query Range Percent Splice Strand
wit-RA 1..2712 199..2910 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:56:16 Download gff for GH13548.complete
Subject Subject Range Query Range Percent Splice Strand
wit-RB 1..2742 199..2940 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:57:51 Download gff for GH13548.complete
Subject Subject Range Query Range Percent Splice Strand
wit-RA 212..4213 1..4002 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:28:49 Download gff for GH13548.complete
Subject Subject Range Query Range Percent Splice Strand
wit-RA 212..4213 1..4002 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:54:18 Download gff for GH13548.complete
Subject Subject Range Query Range Percent Splice Strand
wit-RA 216..4217 1..4002 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:19:10 Download gff for GH13548.complete
Subject Subject Range Query Range Percent Splice Strand
wit-RA 212..4213 1..4002 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:56:16 Download gff for GH13548.complete
Subject Subject Range Query Range Percent Splice Strand
wit-RA 216..4217 1..4002 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:19:23 Download gff for GH13548.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4064152..4066284 1870..4002 100 <- Minus
3L 4066347..4067170 1046..1869 100 <- Minus
3L 4067234..4067803 476..1045 100 <- Minus
3L 4067864..4068088 251..475 100 <- Minus
3L 4068159..4068314 95..250 100 <- Minus
3L 4071409..4071502 1..94 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:19:23 Download gff for GH13548.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4064152..4066284 1870..4002 100 <- Minus
3L 4066347..4067170 1046..1869 100 <- Minus
3L 4067234..4067803 476..1045 100 <- Minus
3L 4067864..4068088 251..475 100 <- Minus
3L 4068159..4068314 95..250 100 <- Minus
3L 4071409..4071502 1..94 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:19:23 Download gff for GH13548.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4064152..4066284 1870..4002 100 <- Minus
3L 4066347..4067170 1046..1869 100 <- Minus
3L 4067234..4067803 476..1045 100 <- Minus
3L 4067864..4068088 251..475 100 <- Minus
3L 4068159..4068314 95..250 100 <- Minus
3L 4071409..4071502 1..94 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:54:18 Download gff for GH13548.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4064152..4066284 1870..4002 100 <- Minus
arm_3L 4066347..4067170 1046..1869 100 <- Minus
arm_3L 4067234..4067803 476..1045 100 <- Minus
arm_3L 4067864..4068088 251..475 100 <- Minus
arm_3L 4068159..4068314 95..250 100 <- Minus
arm_3L 4071409..4071502 1..94 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:52:40 Download gff for GH13548.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4064152..4066284 1870..4002 100 <- Minus
3L 4066347..4067170 1046..1869 100 <- Minus
3L 4067234..4067803 476..1045 100 <- Minus
3L 4067864..4068088 251..475 100 <- Minus
3L 4068159..4068314 95..250 100 <- Minus
3L 4071409..4071502 1..94 100   Minus

GH13548.pep Sequence

Translation from 198 to 2909

> GH13548.pep
MNWAIYLLLALISLGRATPVPNRQYSCMSYQEDDNSFHDDDGDQDSSGEL
QEQQVESTPIPSEPHRRTCPDGYTFCFTIWNQTANGARVVKQGCWKDNTD
RTSICSQSECTSSAPTSKTSSLYYCCCSGGVCNAQYSVVEPAPLELGSNE
GRTSITNRATEKQHQSFLASTMLGLAGGLTALTIGIFLAVQYCRTAKEKP
EPEESPLAPSGPGYSSNLRNVDNMNLIGMLGSGKYGTVMKGLLHDQEVAV
KIYPEEHHQYYVNERNIYALPLMECPALLSYFGYDERCTMDGRMEYQLVL
SLAPLGCLQDWLIANTLTFSECCGMLRSITRGISHLHTELRLGDQHKPCV
AHRDINTRNVLVQADLSCCIADFGFALKVFGSKYEYKGEVAMAETKSINE
VGTLRYMAPELLEGAVNLRDCETSLKQMDVYALGLVLWEVATRCSDFYAP
GQATPPYKAPYEQEVGSHPSFDQMQALVVRHKARPLFPTGWGGGAAAKVV
RDTCEDCWDHDADARLTSLCAEERMQEMSTLRPRAQAQPSSPLLNTNNLV
ASPTAEQGINIIATTTTAAAVHHQMSSDTTGLIQPPPNQQIPLAALEREK
NHLSYPQQQLQPYQGRNPCQERNLAPLTMRTPPVLVERSKKHSFQTQPQE
NSLSCLEHDVSVEELIASHQHQQQKNTIVSTGGNGNSCLGQGFPKQQNTD
QKLRGWHGVRALIHKKLFRKEHAEELCRQLQLGEEKSNLVTALRRPNNLD
LNPRLDKPPPDQLRSAEQRMGTPAHIVPRSLSSSLIKHINGTTNNNSIQS
HGSELQTLTRPASKRRPGHLRTNSLMATTGQGPPTEQQMRRQHSLEVFRE
VFSGRGSSERLRDPSERVKTPGDVPPSVRKARASKTLSLYDDRMMDSSLL
NIL*

GH13548.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:54:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24409-PA 903 GF24409-PA 10..903 6..903 4260 88.8 Plus
Dana\GF17542-PA 521 GF17542-PA 72..508 76..548 636 33.8 Plus
Dana\GF13635-PA 566 GF13635-PA 34..552 43..530 447 27.8 Plus
Dana\GF15519-PA 530 GF15519-PA 221..519 224..530 401 32.1 Plus
Dana\GF12221-PA 624 GF12221-PA 326..618 224..530 398 30.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:54:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14225-PA 903 GG14225-PA 1..903 1..903 4745 96.6 Plus
Dere\GG21187-PA 516 GG21187-PA 62..503 71..548 635 33.7 Plus
Dere\GG23304-PA 570 GG23304-PA 74..556 69..530 437 27.8 Plus
Dere\GG23402-PA 601 GG23402-PA 303..595 224..530 399 31.3 Plus
Dere\GG24313-PA 563 GG24313-PA 254..552 224..530 396 31.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:54:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24979-PA 996 GH24979-PA 98..996 16..903 3591 76.9 Plus
Dgri\GH14126-PA 520 GH14126-PA 39..507 35..548 631 32.1 Plus
Dgri\GH20320-PA 568 GH20320-PA 262..555 224..531 424 32.1 Plus
Dgri\GH21632-PA 477 GH21632-PA 54..460 109..519 405 27.7 Plus
Dgri\GH13402-PA 554 GH13402-PA 172..532 166..519 404 30.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:53:21
Subject Length Description Subject Range Query Range Score Percent Strand
wit-PB 913 CG10776-PB 1..903 1..903 4784 100 Plus
wit-PA 903 CG10776-PA 1..903 1..903 4784 100 Plus
put-PC 516 CG7904-PC 56..503 65..548 631 33.2 Plus
put-PA 516 CG7904-PA 56..503 65..548 631 33.2 Plus
put-PB 520 CG7904-PB 56..503 65..548 631 33.2 Plus
sax-PB 535 CG1891-PB 39..521 69..530 451 28.7 Plus
sax-PA 570 CG1891-PA 74..556 69..530 451 28.7 Plus
sax-PC 582 CG1891-PC 86..568 69..530 451 28.7 Plus
babo-PC 595 CG8224-PC 297..588 224..529 391 30.7 Plus
babo-PA 601 CG8224-PA 303..594 224..529 391 30.7 Plus
babo-PB 622 CG8224-PB 324..615 224..529 391 30.7 Plus
tkv-PD 509 CG14026-PD 200..498 224..530 383 30.8 Plus
tkv-PB 531 CG14026-PB 222..520 224..530 383 30.8 Plus
tkv-PA 563 CG14026-PA 254..552 224..530 383 30.8 Plus
tkv-PC 575 CG14026-PC 266..564 224..530 383 30.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:54:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11419-PA 928 GI11419-PA 14..928 7..903 3601 76.9 Plus
Dmoj\GI10656-PA 519 GI10656-PA 38..494 26..529 634 32.1 Plus
Dmoj\GI19992-PA 566 GI19992-PA 76..553 65..531 442 26.7 Plus
Dmoj\GI20087-PA 668 GI20087-PA 370..651 224..519 407 32.4 Plus
Dmoj\GI19788-PA 489 GI19788-PA 180..467 224..519 401 32.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:54:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16800-PA 915 GL16800-PA 4..915 1..903 3923 83.4 Plus
Dper\GL23126-PA 519 GL23126-PA 14..507 7..549 626 31.8 Plus
Dper\GL10841-PA 566 GL10841-PA 86..552 76..530 450 27.5 Plus
Dper\GL16719-PA 630 GL16719-PA 332..624 224..530 411 31.6 Plus
Dper\GL18561-PA 562 GL18561-PA 178..540 171..519 396 29.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:54:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10555-PA 916 GA10555-PA 4..916 1..903 3909 83.3 Plus
Dpse\GA20674-PA 519 GA20674-PA 14..507 7..549 626 31.8 Plus
Dpse\GA15112-PA 566 GA15112-PA 86..552 76..530 449 27.5 Plus
Dpse\GA20910-PB 706 GA20910-PB 408..700 224..530 412 31.6 Plus
Dpse\GA20910-PC 674 GA20910-PC 376..668 224..530 410 31.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:54:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14019-PA 903 GM14019-PA 1..903 1..903 4832 98.8 Plus
Dsec\GM25839-PA 516 GM25839-PA 56..503 65..548 634 33.5 Plus
Dsec\GM20983-PA 570 GM20983-PA 74..556 69..530 449 28.4 Plus
Dsec\GM21084-PA 617 GM21084-PA 319..611 224..530 399 31.3 Plus
Dsec\GM18031-PA 563 GM18031-PA 254..552 224..530 390 30.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:54:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13298-PA 903 GD13298-PA 1..903 1..903 4829 98.8 Plus
Dsim\GD20410-PA 516 GD20410-PA 56..503 65..548 635 33.5 Plus
Dsim\GD15359-PA 507 GD15359-PA 11..493 69..530 446 28.4 Plus
Dsim\GD10510-PA 570 GD10510-PA 74..556 69..530 446 28.4 Plus
Dsim\GD10620-PA 601 GD10620-PA 303..595 224..530 405 31.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:54:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13615-PA 918 GJ13615-PA 11..918 4..903 3640 77.5 Plus
Dvir\GJ23013-PA 518 GJ23013-PA 37..505 35..548 630 32.6 Plus
Dvir\GJ21241-PA 568 GJ21241-PA 262..555 224..531 424 32.1 Plus
Dvir\GJ21177-PA 599 GJ21177-PA 301..582 224..519 405 32.4 Plus
Dvir\GJ15112-PA 551 GJ15112-PA 172..529 166..519 401 29.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:54:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18023-PA 908 GK18023-PA 19..908 23..903 3605 77.9 Plus
Dwil\GK14450-PA 511 GK14450-PA 37..498 38..548 667 33.7 Plus
Dwil\GK22220-PA 573 GK22220-PA 80..558 65..529 439 27.7 Plus
Dwil\GK21070-PA 509 GK21070-PA 119..487 159..519 400 30.4 Plus
Dwil\GK17989-PA 644 GK17989-PA 346..638 224..530 399 31.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:54:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20653-PA 903 GE20653-PA 1..903 1..903 4775 97.5 Plus
Dyak\GE26437-PA 516 GE26437-PA 56..503 65..548 633 33.5 Plus
Dyak\GE19150-PA 570 GE19150-PA 74..556 69..530 457 28.4 Plus
Dyak\GE19244-PA 600 GE19244-PA 77..594 34..530 399 25.9 Plus
Dyak\GE19007-PA 563 GE19007-PA 254..552 224..530 394 31.1 Plus

GH13548.hyp Sequence

Translation from 198 to 2909

> GH13548.hyp
MNWAIYLLLALISLGRATPVPNRQYSCMSYQEDDNSFHDDDGDQDSSGEL
QEQQVESTPIPSEPHRRTCPDGYTFCFTIWNQTANGARVVKQGCWKDNTD
RTSICSQSECTSSAPTSKTSSLYYCCCSGGVCNAQYSVVEPAPLELGSNE
GRTSITNRATEKQHQSFLASTMLGLAGGLTALTIGIFLAVQYCRTAKEKP
EPEESPLAPSGPGYSSNLRNVDNMNLIGMLGSGKYGTVMKGLLHDQEVAV
KIYPEEHHQYYVNERNIYALPLMECPALLSYFGYDERCTMDGRMEYQLVL
SLAPLGCLQDWLIANTLTFSECCGMLRSITRGISHLHTELRLGDQHKPCV
AHRDINTRNVLVQADLSCCIADFGFALKVFGSKYEYKGEVAMAETKSINE
VGTLRYMAPELLEGAVNLRDCETSLKQMDVYALGLVLWEVATRCSDFYAP
GQATPPYKAPYEQEVGSHPSFDQMQALVVRHKARPLFPTGWGGGAAAKVV
RDTCEDCWDHDADARLTSLCAEERMQEMSTLRPRAQAQPSSPLLNTNNLV
ASPTAEQGINIIATTTTAAAVHHQMSSDTTGLIQPPPNQQIPLAALEREK
NHLSYPQQQLQPYQGRNPCQERNLAPLTMRTPPVLVERSKKHSFQTQPQE
NSLSCLEHDVSVEELIASHQHQQQKNTIVSTGGNGNSCLGQGFPKQQNTD
QKLRGWHGVRALIHKKLFRKEHAEELCRQLQLGEEKSNLVTALRRPNNLD
LNPRLDKPPPDQLRSAEQRMGTPAHIVPRSLSSSLIKHINGTTNNNSIQS
HGSELQTLTRPASKRRPGHLRTNSLMATTGQGPPTEQQMRRQHSLEVFRE
VFSGRGSSERLRDPSERVKTPGDVPPSVRKARASKTLSLYDDRMMDSSLL
NIL*

GH13548.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:42:52
Subject Length Description Subject Range Query Range Score Percent Strand
wit-PB 913 CG10776-PB 1..903 1..903 4784 100 Plus
wit-PA 903 CG10776-PA 1..903 1..903 4784 100 Plus
put-PC 516 CG7904-PC 56..503 65..548 631 33.2 Plus
put-PA 516 CG7904-PA 56..503 65..548 631 33.2 Plus
put-PB 520 CG7904-PB 56..503 65..548 631 33.2 Plus