BDGP Sequence Production Resources |
Search the DGRC for GH13575
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 135 |
Well: | 75 |
Vector: | pOT2 |
Associated Gene/Transcript | Pgi-RA |
Protein status: | GH13575.pep: gold |
Preliminary Size: | 2466 |
Sequenced Size: | 2469 |
Gene | Date | Evidence |
---|---|---|
CG8251 | 2001-01-01 | Release 2 assignment |
CG8251 | 2001-07-04 | Blastp of sequenced clone |
CG8251 | 2003-01-01 | Sim4 clustering to Release 3 |
Pgi | 2008-04-29 | Release 5.5 accounting |
Pgi | 2008-08-15 | Release 5.9 accounting |
Pgi | 2008-12-18 | 5.12 accounting |
2469 bp (2469 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051468
> GH13575.complete TCGTTTTGAAAATTTCAGTTTATGTCCTTTTGCCTACCGGTGCAGACGAT CTAGGAGTAGGAAGTTCTCAGTTCATCTCCACGCGGCCACACACAGTAAA TTCGCACACACTGCAAACCGATCGGCACATTAAAACAAGAGCGCGGCCGA CGTGGCAACACTCGCTTGTTTTTCATTTGACATTGAAAGGTGCTCGCGAA TTCCAGAAAGGACGTTGGAAAATCGGCAGCCGCTCAGTCAGTACCTATCA AAAGCAAACACGGCGAAGTTGTGGTGCGGTGCTCTGGAGATTTGCCGGAG CCAGATAATAGGAACTACCCGACGCCTAAGCAGCCGGATCCGCTATTATA AGTGAAGTGTCGCGAGCGGTCGAAGCAGTTCGCCTGTGCTCTCTTCTCCG TGTGCTACTAATTTGCATCGAGTGCTAAATAGTCCTCCCTTGCCCTTCTA CTCCGCATCCGCCTGCTGTTCCTGCTTGGGATAACTGAAGTAAGATGGCC GGCCCACTTCCTCCGCTCAACCAGGAGGCAGCGTTCCAGAAGCTGCAGGA GTACTACGACTCCAAGGGCAAGGACCTGAACATCAAGGACCTGTTCGTGA AGGATTCCAAGAGATTCTCAAAATACAGCCTGCGCCTGCACACCCAGAAC GATGGCGAGATACTGCTGGACTACTCGAAGAACCGTATCAATGACGAGGT CTGGGATCTGCTCCTCACCCTGGCCAAGGTGCGCCGCGTTAACGCCGCGC GGGACGCCATGTTCTCCGGCCAGCACATTAACATCACGGAGAACCGCGCC GTCCTCCACACGGCCCTGCGCAACCGCGGCACGGATCCCGTCCTGGTGGA CGACAAGGACGTGATGCCCGATGTGCGCGCCGAACTGGCCCACATGAAGG AGTTCACCAACATGGTCATCTCCGGCGTGTGGCGCGGCTGCACCGGCAAA CAGATCACCGACGTGGTCAACATCGGCATCGGTGGCTCCGATCTGGGCCC GCTGATGGTCACCGAAGCGCTGAAGCCCTACGGCAAGGGCCTTCACTCCC ACTTTGTGTCGAACATCGATGGCACTCATCTGGCCGAGGTCCTCAAGAAG GTCAACTACGAGACCACCCTCTTCATTGTCGCCTCAAAAACTTTCACCAC CCAGGAGACCATTACGAACGCCACCTCCGCCAAGACCTGGCTCCTGGAGC ATTCCAAGGAGCCTGAGTCCGTGGCCAAGCATTTTGTGGCCCTGTCGACC AACAAGGAAAAGGTCACCGAATTCGGCATTGACAGCACCAACATGTTCGG TTTTTGGGATTGGGTGGGCGGTCGCTACTCCCTGTGGTCGGCCATTGGAC TGTCAATCTGTCTGTCCATTGGCTTTGAGAACTTTGAGCAACTGCTGGAT GGAGCTCACTTCATGGACAACCATTTCAAGACGACACCATTCGAGAAGAA TGCTCCTGTTATCCTGGCGTTGCTAGGCGTTTGGTACTCCAACTTCTTCA AGGCGGAAACACATGCCCTCCTTCCCTACGATCAGTACTTGCACCGGTTC GCCGCCTACTTCCAGCAGGGCGATATGGAGAGCAACGGCAAGTTCGTCAG CAAGTCGGGCAAACCCGTCAAGTACAGCACTGGTCCGATCGTGTGGGGCG AGCCTGGCACCAATGGCCAGCACGCCTTCTACCAGCTCATCCACCAGGGC ACCCGCCTGATCCCCTGCGATTTCATCGCTCCCGCCCAGACACACAATCC CATTGCCGGCGGCAAGCACCACAAGATTCTGCTATCGAATTTCCTTGCCC AGACGGAGGCTTTAATGGCCGGAAAGACGGTCGACGAGGCCAGGACCGAG CTGTCCAAGGCTGGCCTGTGCGGCAACGAGCTGGATAACTTGTTGCCCCA CAAGGTGTTCGTCGGCAACCGGCCCACAAACTCGATTGTGGTGAAGAAGG TTTCACCTTTCACCCTAGGCGCGTTGATTGCGCTGTACGAGCACAAGATC TTCGTTCAGGGCATCATTTGGGACATCAACTCGTTCGACCAATGGGGTGT GGAGCTGGGCAAGCAGCTGGCCAAGGCCATCGAGCCGGAGCTGGATCACT GCAACGAGGTCTCCACGCACGACAGTTCCACGAACGGTCTAATTAACTTC ATCAAAGCCAATTGGAAGTAATCATGTCTGGCTATTTGTTGCGAATTAAA AAGAAATGTTTACACAAATGCTCTAATTGTTAGTAGTTTCTGAGCCGTTA TTCAGTAGCCGCCGCTTATGTATACTCGAGCTACAAGCCCCCTGTTATTG GCACATTATTCAACTGTATTTATGAACTGGATATGTTTGTTTGCTTGCGT ATCGATGAAATCTCGTGTCGGAATTAGACCAACAATTGGCTCTCACTATT CGTTGTTGCACGTAGTTTAAAACCGTAAATAAAAATTTATGAATTCGATG TAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pgi-RA | 2680 | Pgi-RA | 196..2650 | 1..2455 | 12275 | 100 | Plus |
Pgi.b | 2577 | Pgi.b | 196..2362 | 1..2167 | 10835 | 100 | Plus |
Pgi.a | 2436 | Pgi.a | 414..2436 | 429..2451 | 10100 | 99.9 | Plus |
Pgi.a | 2436 | Pgi.a | 67..417 | 1..351 | 1755 | 100 | Plus |
Pgi.b | 2577 | Pgi.b | 2363..2577 | 2237..2451 | 1075 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 4800984..4801611 | 628..1 | 3140 | 100 | Minus |
chr2R | 21145070 | chr2R | 4800156..4800741 | 1211..626 | 2930 | 100 | Minus |
chr2R | 21145070 | chr2R | 4798977..4799505 | 1980..1452 | 2645 | 100 | Minus |
chr2R | 21145070 | chr2R | 4798451..4798922 | 2451..1980 | 2360 | 100 | Minus |
chr2R | 21145070 | chr2R | 4799567..4799809 | 1452..1210 | 1215 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 8913433..8914060 | 628..1 | 3140 | 100 | Minus |
2R | 25286936 | 2R | 8912605..8913190 | 1211..626 | 2930 | 100 | Minus |
2R | 25286936 | 2R | 8911426..8911954 | 1980..1452 | 2645 | 100 | Minus |
2R | 25286936 | 2R | 8910896..8911371 | 2455..1980 | 2380 | 100 | Minus |
2R | 25286936 | 2R | 8912016..8912258 | 1452..1210 | 1215 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 8914632..8915259 | 628..1 | 3140 | 100 | Minus |
2R | 25260384 | 2R | 8913804..8914389 | 1211..626 | 2930 | 100 | Minus |
2R | 25260384 | 2R | 8912625..8913153 | 1980..1452 | 2645 | 100 | Minus |
2R | 25260384 | 2R | 8912095..8912570 | 2455..1980 | 2380 | 100 | Minus |
2R | 25260384 | 2R | 8913215..8913457 | 1452..1210 | 1215 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4798451..4798921 | 1981..2451 | 100 | <- | Minus |
chr2R | 4798977..4799505 | 1452..1980 | 100 | <- | Minus |
chr2R | 4799568..4799807 | 1212..1451 | 100 | <- | Minus |
chr2R | 4800156..4800738 | 629..1211 | 100 | <- | Minus |
chr2R | 4800984..4801611 | 1..628 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgi-RC | 1..1677 | 495..2171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgi-RC | 1..1677 | 495..2171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgi-RA | 1..1677 | 495..2171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgi-RC | 1..1677 | 495..2171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgi-RA | 1..1677 | 495..2171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgi-RA | 67..2515 | 1..2449 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgi-RA | 67..2515 | 1..2449 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgi-RA | 10..2460 | 1..2451 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgi-RA | 67..2515 | 1..2449 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pgi-RA | 10..2460 | 1..2451 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8910900..8911370 | 1981..2451 | 100 | <- | Minus |
2R | 8911426..8911954 | 1452..1980 | 100 | <- | Minus |
2R | 8912017..8912256 | 1212..1451 | 100 | <- | Minus |
2R | 8912605..8913187 | 629..1211 | 100 | <- | Minus |
2R | 8913433..8914060 | 1..628 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8910900..8911370 | 1981..2451 | 100 | <- | Minus |
2R | 8911426..8911954 | 1452..1980 | 100 | <- | Minus |
2R | 8912017..8912256 | 1212..1451 | 100 | <- | Minus |
2R | 8912605..8913187 | 629..1211 | 100 | <- | Minus |
2R | 8913433..8914060 | 1..628 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8910900..8911370 | 1981..2451 | 100 | <- | Minus |
2R | 8911426..8911954 | 1452..1980 | 100 | <- | Minus |
2R | 8912017..8912256 | 1212..1451 | 100 | <- | Minus |
2R | 8912605..8913187 | 629..1211 | 100 | <- | Minus |
2R | 8913433..8914060 | 1..628 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4798405..4798875 | 1981..2451 | 100 | <- | Minus |
arm_2R | 4798931..4799459 | 1452..1980 | 100 | <- | Minus |
arm_2R | 4799522..4799761 | 1212..1451 | 100 | <- | Minus |
arm_2R | 4800110..4800692 | 629..1211 | 100 | <- | Minus |
arm_2R | 4800938..4801565 | 1..628 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8912099..8912569 | 1981..2451 | 100 | <- | Minus |
2R | 8912625..8913153 | 1452..1980 | 100 | <- | Minus |
2R | 8913216..8913455 | 1212..1451 | 100 | <- | Minus |
2R | 8913804..8914386 | 629..1211 | 100 | <- | Minus |
2R | 8914632..8915259 | 1..628 | 100 | Minus |
Translation from 494 to 2170
> GH13575.pep MAGPLPPLNQEAAFQKLQEYYDSKGKDLNIKDLFVKDSKRFSKYSLRLHT QNDGEILLDYSKNRINDEVWDLLLTLAKVRRVNAARDAMFSGQHINITEN RAVLHTALRNRGTDPVLVDDKDVMPDVRAELAHMKEFTNMVISGVWRGCT GKQITDVVNIGIGGSDLGPLMVTEALKPYGKGLHSHFVSNIDGTHLAEVL KKVNYETTLFIVASKTFTTQETITNATSAKTWLLEHSKEPESVAKHFVAL STNKEKVTEFGIDSTNMFGFWDWVGGRYSLWSAIGLSICLSIGFENFEQL LDGAHFMDNHFKTTPFEKNAPVILALLGVWYSNFFKAETHALLPYDQYLH RFAAYFQQGDMESNGKFVSKSGKPVKYSTGPIVWGEPGTNGQHAFYQLIH QGTRLIPCDFIAPAQTHNPIAGGKHHKILLSNFLAQTEALMAGKTVDEAR TELSKAGLCGNELDNLLPHKVFVGNRPTNSIVVKKVSPFTLGALIALYEH KIFVQGIIWDINSFDQWGVELGKQLAKAIEPELDHCNEVSTHDSSTNGLI NFIKANWK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12560-PA | 558 | GF12560-PA | 1..558 | 1..558 | 2848 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10610-PA | 558 | GG10610-PA | 1..558 | 1..558 | 2953 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22686-PA | 558 | GH22686-PA | 1..558 | 1..558 | 2700 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pgi-PC | 558 | CG8251-PC | 1..558 | 1..558 | 2950 | 100 | Plus |
Pgi-PB | 558 | CG8251-PB | 1..558 | 1..558 | 2950 | 100 | Plus |
Pgi-PA | 558 | CG8251-PA | 1..558 | 1..558 | 2950 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20614-PA | 558 | GI20614-PA | 1..558 | 1..558 | 2713 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10407-PA | 559 | GL10407-PA | 1..559 | 1..558 | 2712 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20931-PA | 559 | GA20931-PA | 1..559 | 1..558 | 2712 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20655-PA | 558 | GM20655-PA | 1..558 | 1..558 | 2996 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21054-PA | 558 | GJ21054-PA | 1..558 | 1..558 | 2715 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21948-PA | 558 | GK21948-PA | 1..558 | 1..558 | 2747 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Pgi-PA | 558 | GE22729-PA | 1..558 | 1..558 | 2960 | 98.2 | Plus |
Translation from 494 to 2170
> GH13575.hyp MAGPLPPLNQEAAFQKLQEYYDSKGKDLNIKDLFVKDSKRFSKYSLRLHT QNDGEILLDYSKNRINDEVWDLLLTLAKVRRVNAARDAMFSGQHINITEN RAVLHTALRNRGTDPVLVDDKDVMPDVRAELAHMKEFTNMVISGVWRGCT GKQITDVVNIGIGGSDLGPLMVTEALKPYGKGLHSHFVSNIDGTHLAEVL KKVNYETTLFIVASKTFTTQETITNATSAKTWLLEHSKEPESVAKHFVAL STNKEKVTEFGIDSTNMFGFWDWVGGRYSLWSAIGLSICLSIGFENFEQL LDGAHFMDNHFKTTPFEKNAPVILALLGVWYSNFFKAETHALLPYDQYLH RFAAYFQQGDMESNGKFVSKSGKPVKYSTGPIVWGEPGTNGQHAFYQLIH QGTRLIPCDFIAPAQTHNPIAGGKHHKILLSNFLAQTEALMAGKTVDEAR TELSKAGLCGNELDNLLPHKVFVGNRPTNSIVVKKVSPFTLGALIALYEH KIFVQGIIWDINSFDQWGVELGKQLAKAIEPELDHCNEVSTHDSSTNGLI NFIKANWK*