Clone GH13594 Report

Search the DGRC for GH13594

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:135
Well:94
Vector:pOT2
Associated Gene/TranscriptCG14718-RA
Protein status:GH13594.pep: gold
Preliminary Size:1621
Sequenced Size:2092

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14718 2001-01-01 Release 2 assignment
CG14718 2001-07-04 Blastp of sequenced clone
CG14718 2003-01-01 Sim4 clustering to Release 3
CG14718 2008-04-29 Release 5.5 accounting
CG14718 2008-08-15 Release 5.9 accounting
CG14718 2008-12-18 5.12 accounting

Clone Sequence Records

GH13594.complete Sequence

2092 bp (2092 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051469

> GH13594.complete
TTATCAAAGATTTCAGTAGTTTTTAAAGGAATCGGTTCGTGTTTGATCAG
CAGTAAAGGCCACACAACGAGGAGTTTTACGTATATTTTTTACCAACCAT
GGATAGCACGTCAGCCAGCGTAGTGTATACGAATTCTTTTTACGCTCCAA
ATTACTCGGACACCCAGCAGCCACAGCCACAGCTGCAGACTCAGCAACAG
ATGTTCCATGCCAACTACATCGTCGGAACCACATTGGGTTCTGGATTGGG
ATTTAATTTTGCACCAGCCCCCATTCCCCAGGCGAGTGCCGCTTCCGGTT
TGAGTCCCAGAGGCATGTACAGTGATCTCTACCGCTACGAGGATGGAAGC
GGCGATGCCAGCGGTTCCTTGCTTCTGGTCCAAGAGGATGACCACTTCTG
TGGTGCAGAGGCGGACCAGCAGTTGGTGGCCAGCACGTCGTCCTCATGCC
CGATGGCGAGTTCAGGCGAGTCCGTGAGCATTGACACAGAGCAGGAGGCG
GAACGGGATCTTCAGATGAACCAATGTGAGACGCTGGAGCGGGAAGAGCT
GAATGGAGATATAGGGGAAATGGGGGAAATGGAGGAGCTTGCAGAGGAGG
TTAATGGCGAGCAGAGGCCGCCGCTGTTACCCTGCATGGGTGGCAACACA
TCCTACATGGTGTTCCCGCGCACCGCCGCCGACTACATGCCCCGCCTGGC
GCTCCCGCGGCATAGGCCCTATATAAGCATCGGTCAGGAGCAGTACGTGA
TCCAGGCGGAAACTGTCTTCGTGCTGGGCATGCGCCTCAATGTGACCAAG
AACGACATCATCCTGTTCTTCGGCAAAGTGGGCGTTATCAAGATGGACGA
GTCGACCAACAAGCCGAAGATCTTCGTCTACAAGAACAAGATAACGGGGC
GCTCCAAGGGTGAGGCCACTATAACCTATGTGAGTCCATTCTCTGCACAG
GCGGCGATTAGTTGTCTGAGTGGGGCCAAGTTCATGGGACAGGTGATCAC
CGTTCTGCCCGCCTACCTATCCACCCGGAGGGGCAGTGTCCGGTACAGTT
ATCCGCGAGAGCTTAATGCGCCGGAGCACCAACGTCGCCAGCGGGCAATG
AAATGGAAGCCAGCCATCGACAATTGGGTGTGCATGCTCTGCCGGAACAG
CAACTTCGTCTGGCGTTCCAGCTGCAACAGATGCCAGGCGGACAAGGTGG
TCGCTCCTCAGAATAACGAGGGAAGTTCCTGGGCGGGATCACGCGAAGAG
GACGGTGCCCCTCGTCGTTGGCGGCCATACAGGAACGACTGGCTGTGCAA
GATTTGCTATAATATGAATTTCTGGTACCGAGCGAAGTGCAATCGTTGCC
ACGCCCTGCGTTCCGATGAAATGAAGAGCTCCGAGTCGACGGAGGAAGAT
ACCTGGGAGCTGGTTCTGAATCCGCCCATTGCAGAGTAGAAACAGTCCAG
TCCACCTCGTTCTGTCTGTGTCTGTGTCTGTATCTATACGTGTTATCTGT
TTTGTGTATCCGCATCTTTTTGTACGAAGGACACTTCTGCCTTCTGCATC
CTGCTCCTTCCGGACTTCTAAAAATTTCAAGTGATTGGAACGCGAACTGC
GTCGTGATATCCAGATGCAACTTCAATTGAATTGAATCGATTCGATGCGA
TGCCCATGAGCTTGTGAGCCCCATCCAAGAACAGCAAGAGCCAAGAACAA
AAGACACCTAAATTCCTGTTAATGCCCGTCTTAGAAAAAGGCGTTTGAAT
GCAATGCCGCCACCATATACCCGCCGAACCAGTCTTTGTCCCCAGAGCAG
AGATCCTCAGATTGCGGGACAATGCAACTTGCTGAATGGTAATCCACTTA
ATCCGGGTAACTGAATATTTTACCCAGGCACAAAAGGCAACCGGACCCAC
CTGGCCAGCTCTAAACGTTTAATGAATTTATTTACTTTCCCGACGCGTGC
AGTCAGTGGCTCAGTGGCTCATTGGCTCTGCGGAACTGCACTGTAAATCG
AAATATTATATTCAATGAAGTCTAAATTGTTTAATAAAATTAATCTTCTA
TTCATTTATTTATAGAAAGGGTGAAAAAAAAAAAAAAAAAAA

GH13594.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:46:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG14718-RA 2107 CG14718-RA 35..2107 1..2073 10365 100 Plus
CG14718.a 2036 CG14718.a 69..2036 106..2073 9840 100 Plus
CG14718.a 2036 CG14718.a 36..69 1..34 170 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:11:42
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 7526169..7528249 1..2073 10220 99.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:49:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:11:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11700648..11702722 1..2075 10375 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:07:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 11441479..11443553 1..2075 10375 100 Plus
Blast to na_te.dros performed on 2019-03-15 19:11:40 has no hits.

GH13594.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:12:40 Download gff for GH13594.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 7526169..7528249 1..2073 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:40:37 Download gff for GH13594.complete
Subject Subject Range Query Range Percent Splice Strand
CG14718-RA 1..1341 99..1439 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:41:22 Download gff for GH13594.complete
Subject Subject Range Query Range Percent Splice Strand
CG14718-RA 1..1341 99..1439 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:45:36 Download gff for GH13594.complete
Subject Subject Range Query Range Percent Splice Strand
CG14718-RA 1..1341 99..1439 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:19:40 Download gff for GH13594.complete
Subject Subject Range Query Range Percent Splice Strand
CG14718-RA 1..1341 99..1439 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:13:21 Download gff for GH13594.complete
Subject Subject Range Query Range Percent Splice Strand
CG14718-RA 1..1341 99..1439 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:47:17 Download gff for GH13594.complete
Subject Subject Range Query Range Percent Splice Strand
CG14718-RA 35..2107 1..2073 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:41:22 Download gff for GH13594.complete
Subject Subject Range Query Range Percent Splice Strand
CG14718-RA 35..2107 1..2073 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:45:36 Download gff for GH13594.complete
Subject Subject Range Query Range Percent Splice Strand
CG14718-RA 35..2107 1..2073 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:19:40 Download gff for GH13594.complete
Subject Subject Range Query Range Percent Splice Strand
CG14718-RA 35..2107 1..2073 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:13:21 Download gff for GH13594.complete
Subject Subject Range Query Range Percent Splice Strand
CG14718-RA 35..2107 1..2073 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:12:40 Download gff for GH13594.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11700648..11702720 1..2073 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:12:40 Download gff for GH13594.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11700648..11702720 1..2073 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:12:40 Download gff for GH13594.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11700648..11702720 1..2073 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:45:36 Download gff for GH13594.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7526370..7528442 1..2073 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:54:37 Download gff for GH13594.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11441479..11443551 1..2073 100   Plus

GH13594.hyp Sequence

Translation from 98 to 1438

> GH13594.hyp
MDSTSASVVYTNSFYAPNYSDTQQPQPQLQTQQQMFHANYIVGTTLGSGL
GFNFAPAPIPQASAASGLSPRGMYSDLYRYEDGSGDASGSLLLVQEDDHF
CGAEADQQLVASTSSSCPMASSGESVSIDTEQEAERDLQMNQCETLEREE
LNGDIGEMGEMEELAEEVNGEQRPPLLPCMGGNTSYMVFPRTAADYMPRL
ALPRHRPYISIGQEQYVIQAETVFVLGMRLNVTKNDIILFFGKVGVIKMD
ESTNKPKIFVYKNKITGRSKGEATITYVSPFSAQAAISCLSGAKFMGQVI
TVLPAYLSTRRGSVRYSYPRELNAPEHQRRQRAMKWKPAIDNWVCMLCRN
SNFVWRSSCNRCQADKVVAPQNNEGSSWAGSREEDGAPRRWRPYRNDWLC
KICYNMNFWYRAKCNRCHALRSDEMKSSESTEEDTWELVLNPPIAE*

GH13594.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:43:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG14718-PA 446 CG14718-PA 1..446 1..446 2374 100 Plus
caz-PD 355 CG3606-PD 67..157 212..302 213 48.4 Plus
caz-PC 384 CG3606-PC 96..186 212..302 213 48.4 Plus
caz-PB 399 CG3606-PB 111..201 212..302 213 48.4 Plus

GH13594.pep Sequence

Translation from 98 to 1438

> GH13594.pep
MDSTSASVVYTNSFYAPNYSDTQQPQPQLQTQQQMFHANYIVGTTLGSGL
GFNFAPAPIPQASAASGLSPRGMYSDLYRYEDGSGDASGSLLLVQEDDHF
CGAEADQQLVASTSSSCPMASSGESVSIDTEQEAERDLQMNQCETLEREE
LNGDIGEMGEMEELAEEVNGEQRPPLLPCMGGNTSYMVFPRTAADYMPRL
ALPRHRPYISIGQEQYVIQAETVFVLGMRLNVTKNDIILFFGKVGVIKMD
ESTNKPKIFVYKNKITGRSKGEATITYVSPFSAQAAISCLSGAKFMGQVI
TVLPAYLSTRRGSVRYSYPRELNAPEHQRRQRAMKWKPAIDNWVCMLCRN
SNFVWRSSCNRCQADKVVAPQNNEGSSWAGSREEDGAPRRWRPYRNDWLC
KICYNMNFWYRAKCNRCHALRSDEMKSSESTEEDTWELVLNPPIAE*

GH13594.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:15:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18392-PA 505 GF18392-PA 230..499 160..441 959 62.1 Plus
Dana\GF19034-PA 374 GF19034-PA 101..186 217..302 221 50 Plus
Dana\GF18392-PA 505 GF18392-PA 1..104 1..101 208 50.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:15:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18377-PA 444 GG18377-PA 1..444 1..446 1739 81.3 Plus
Dere\GG17948-PA 406 GG17948-PA 113..198 217..302 217 48.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:15:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19314-PA 332 GH19314-PA 10..326 76..440 691 45.7 Plus
Dgri\GH12560-PA 415 GH12560-PA 119..204 217..302 221 50 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:04:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG14718-PA 446 CG14718-PA 1..446 1..446 2374 100 Plus
caz-PD 355 CG3606-PD 67..157 212..302 213 48.4 Plus
caz-PC 384 CG3606-PC 96..186 212..302 213 48.4 Plus
caz-PB 399 CG3606-PB 111..201 212..302 213 48.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:15:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24076-PA 395 GI24076-PA 147..390 187..441 756 57.4 Plus
Dmoj\GI11213-PA 414 GI11213-PA 119..204 217..302 219 50 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:15:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12385-PA 410 GL12385-PA 42..389 76..440 749 44.7 Plus
Dper\GL21338-PA 386 GL21338-PA 97..182 217..302 223 51.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:15:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13199-PB 408 GA13199-PB 152..387 199..440 749 57.8 Plus
Dpse\GA22827-PA 386 GA22827-PA 97..182 217..302 224 51.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 22:15:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23972-PA 436 GM23972-PA 1..436 1..446 1984 89.2 Plus
Dsec\GM13418-PA 400 GM13418-PA 113..198 217..302 224 50 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:15:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18777-PA 445 GD18777-PA 1..445 1..446 2030 91 Plus
Dsim\GD17272-PA 406 GD17272-PA 113..198 217..302 219 48.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:15:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10896-PA 248 GJ10896-PA 4..243 191..441 776 59.9 Plus
Dvir\GJ18507-PA 386 GJ18507-PA 115..202 217..302 204 48.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:15:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20208-PA 327 GK20208-PA 159..326 207..366 531 59.9 Plus
Dwil\GK16102-PA 194 GK16102-PA 9..173 212..366 509 58.7 Plus
Dwil\GK21292-PA 189 GK21292-PA 58..179 207..329 399 62.1 Plus
Dwil\GK10812-PA 164 GK10812-PA 9..161 297..440 344 47.2 Plus
Dwil\GK16537-PA 94 GK16537-PA 2..93 286..366 265 58.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:15:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24196-PA 459 GE24196-PA 1..459 1..446 1658 77.2 Plus