BDGP Sequence Production Resources |
Search the DGRC for GH13725
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 137 |
Well: | 25 |
Vector: | pOT2 |
Associated Gene/Transcript | Tcp-1zeta-RA |
Protein status: | GH13725.pep: gold |
Preliminary Size: | 1919 |
Sequenced Size: | 1921 |
Gene | Date | Evidence |
---|---|---|
CG8231 | 2001-07-04 | Blastp of sequenced clone |
CG8231 | 2003-01-01 | Sim4 clustering to Release 3 |
Tcp-1zeta | 2008-04-29 | Release 5.5 accounting |
Tcp-1zeta | 2008-08-15 | Release 5.9 accounting |
Tcp-1zeta | 2008-12-18 | 5.12 accounting |
1921 bp (1921 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051470
> GH13725.complete ATTTCTTCGATTCGCCTAACTTTAAGCGTGCTTGGATTTGTGCCGATTCC TATTGATTTATTTTGCCGAGCTAAGAAAATCTCTGTTTAATTGCGACACG CGATGGCTTCGATTAGCTTGCTGAACCCCAAGGCCGAGTTTGCCCGCGCC GCCCAGGCTCTGGCCATCAATATCAGTGCCGCCAAGGGACTGCAGGATGT GATGCGCACCAATTTGGGACCCAAGGGCACCGTTAAGATGTTGGTTTCTG GCGCCGGCGACATCAAGATCACCAAGGATGGCAATGTCCTGCTGCACGAA ATGCAGATCCAACATCCGACTGCCTCTATGATTGCCAGGGCCAGCACGGC CCAGGATGATTCCACCGGCGATGGAACCACCACCACTGTGATGCTTATTG GCGAGCTCCTGAAGCAGGCCGATATCTATCTGTCCGAGGGACTGCATCCT CGCATCATGACCGATGGATTCGAGAAGGCACGCGACAAGGCATTGGAGGT GCTCGACCAGGTCAAGGTGCCCGTGGAGATCAACAAGAAGAACCTGGTGG AGGTGGCCAACACAAGTCTGAAGACCAAGGTGCATCCCGCCCTTGCCGAT CTGCTTACGGACGTCTGCGTGAATGCCGTGCTGACCATTGCCAGTGCCGA TAAGACCAAGCCCGTGGACCTCCACATGGTGGAGCTGATGGAGATGCAGC ACAAATCCGATACCGATACACAGCTGGTGCGTGGACTAGTCATGGACCAT GGTGCTCGCCACCCGGACATGCCGAAGCGTTTGGAGAATGCCTACATCCT TACGGCCAATGTCTCGCTGGAGTACGAGAAGGCCGAGGTCAACTCTGGCT TCTTCTACAAGACCGCCGAGGAGCGTGAGGCCTTTGTGCGCGCCGAGCGC GAATTCATCGACCAGCGTGTGAAGAAGGTGATCGAATTGAAGCGCTCCGT GTGCGATGGCACCGACAAAACCTTCGTCCTGATCAACCAGAAGGGCATCG ACCCCATCTCGCTGGACGCCCTGGCCAAGGAGGGCATCCTGGCCTTGCGT CGCGCCAAGCGCCGCAACATGGAGCGTCTGTCTTTGGCCTGCGGTGGCAC TGCAATGAACTCCTTTGACGATCTGCAGGAGGAGCACTTGGGATACGCCG GTGTGGTGTACGAGCATGTTCTGGGCGAGAACAAGTACACTTTCGTTGAG GACTGCAAGAACCCGCTGTCCGTCACGATCCTGATCAAGGGTCCCAACAA GCACACGATCACCCAGATCAAGGACGCCATCAGGGACGGTCTGCGTGCCA TCAACAACACCATTGCCGATAAGGCTCTGGTGCCCGGAGCTGGAGCATTC GAGGTGCGCGCGTACAACGAGCTGGTCGCCTTCAAGGACACCATCAAGGG CAAGTCCCGCCTGGCAGTGCAGGCCTTTGCCGATGCCCTGCTGGTCATTC CCAAGACGCTGGCCGTGAACAGCGGCTACGATGCCCAGGACACAATCGTC AAGCTGACTGTTGAGGATCGCCTGAGTCCCGAACTGGTCGGCCTGGATCT GGCCACCGGGGAGCCCATGAAGCCCGTGGATCTGGGCGTCTACGACAACT ACATCGTTAAGAAGCAGATCCTCAACTCCTGTTCGATCATTGCCAGCAAC CTGCTTCTCGTCGACGAGGTGATGCGTGCGGGCATGACGAGCCTCAAGGG CTAGTCCCCATCATTTCATCCGACCCATTCAATTTAACCAAGTTAATGCA CCGCATGCTACTCAACCCGCGTCTCTCAAAGCCACACACAACCAAAAGAA AACTAAACACGTAAATAATTTGGAAACACATGAAATCGGAATGGTTGCGG CTGCAAGTATTCACATTTAAAATACAATTCTAATAAATACAAAAACCAAA CACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tcp-1zeta-RA | 2138 | Tcp-1zeta-RA | 121..2024 | 1..1904 | 9520 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15636500..15636738 | 1..239 | 97 | -> | Plus |
chrX | 15637139..15638802 | 240..1903 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tcp-1zeta-RA | 1..1602 | 103..1704 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tcp-1zeta-RA | 1..1602 | 103..1704 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tcp-1zeta-RA | 1..1602 | 103..1704 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tcp-1zeta-RA | 1..1602 | 103..1704 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tcp-1zeta-RA | 1..1602 | 103..1704 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tcp-1zeta-RA | 44..1946 | 1..1903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tcp-1zeta-RA | 44..1946 | 1..1903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tcp-1zeta-RA | 22..1924 | 1..1903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tcp-1zeta-RA | 44..1946 | 1..1903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tcp-1zeta-RA | 22..1924 | 1..1903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15746669..15746907 | 1..239 | 100 | -> | Plus |
X | 15747308..15748971 | 240..1903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15746669..15746907 | 1..239 | 100 | -> | Plus |
X | 15747308..15748971 | 240..1903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15746669..15746907 | 1..239 | 100 | -> | Plus |
X | 15747308..15748971 | 240..1903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15640702..15640940 | 1..239 | 100 | -> | Plus |
arm_X | 15641341..15643004 | 240..1903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15754767..15755005 | 1..239 | 100 | -> | Plus |
X | 15755406..15757069 | 240..1903 | 100 | Plus |
Translation from 102 to 1703
> GH13725.pep MASISLLNPKAEFARAAQALAINISAAKGLQDVMRTNLGPKGTVKMLVSG AGDIKITKDGNVLLHEMQIQHPTASMIARASTAQDDSTGDGTTTTVMLIG ELLKQADIYLSEGLHPRIMTDGFEKARDKALEVLDQVKVPVEINKKNLVE VANTSLKTKVHPALADLLTDVCVNAVLTIASADKTKPVDLHMVELMEMQH KSDTDTQLVRGLVMDHGARHPDMPKRLENAYILTANVSLEYEKAEVNSGF FYKTAEEREAFVRAEREFIDQRVKKVIELKRSVCDGTDKTFVLINQKGID PISLDALAKEGILALRRAKRRNMERLSLACGGTAMNSFDDLQEEHLGYAG VVYEHVLGENKYTFVEDCKNPLSVTILIKGPNKHTITQIKDAIRDGLRAI NNTIADKALVPGAGAFEVRAYNELVAFKDTIKGKSRLAVQAFADALLVIP KTLAVNSGYDAQDTIVKLTVEDRLSPELVGLDLATGEPMKPVDLGVYDNY IVKKQILNSCSIIASNLLLVDEVMRAGMTSLKG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19478-PA | 532 | GF19478-PA | 1..532 | 1..533 | 2751 | 97.7 | Plus |
Dana\GF13619-PA | 546 | GF13619-PA | 1..546 | 1..533 | 1835 | 63.9 | Plus |
Dana\GF15661-PA | 533 | GF15661-PA | 30..473 | 23..468 | 582 | 32.5 | Plus |
Dana\GF12298-PA | 542 | GF12298-PA | 34..478 | 19..468 | 560 | 31.2 | Plus |
Dana\GF17067-PA | 544 | GF17067-PA | 14..522 | 8..524 | 544 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17906-PA | 533 | GG17906-PA | 1..533 | 1..533 | 2784 | 98.5 | Plus |
Dere\GG10247-PA | 533 | GG10247-PA | 30..473 | 23..468 | 580 | 32.7 | Plus |
Dere\GG20252-PA | 542 | GG20252-PA | 34..478 | 19..468 | 560 | 31.2 | Plus |
Dere\GG21785-PA | 544 | GG21785-PA | 14..454 | 8..460 | 534 | 29.7 | Plus |
Dere\GG12510-PA | 557 | GG12510-PA | 24..535 | 23..525 | 509 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24158-PA | 532 | GH24158-PA | 1..532 | 1..533 | 2610 | 94.7 | Plus |
Dgri\GH21004-PA | 536 | GH21004-PA | 1..531 | 1..532 | 1800 | 64.5 | Plus |
Dgri\GH19719-PA | 541 | GH19719-PA | 34..478 | 19..468 | 571 | 31.4 | Plus |
Dgri\GH11666-PA | 533 | GH11666-PA | 30..473 | 23..468 | 559 | 32 | Plus |
Dgri\GH18159-PA | 544 | GH18159-PA | 14..522 | 8..524 | 538 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CCT6-PA | 533 | CG8231-PA | 1..533 | 1..533 | 2665 | 100 | Plus |
CCT4-PA | 533 | CG5525-PA | 30..529 | 23..524 | 591 | 29.5 | Plus |
CCT5-PA | 542 | CG8439-PA | 34..534 | 19..523 | 587 | 30.6 | Plus |
CCT5-PB | 512 | CG8439-PB | 8..504 | 23..523 | 583 | 30.6 | Plus |
CCT3-PD | 544 | CG8977-PD | 14..522 | 8..524 | 557 | 27.8 | Plus |
CCT3-PC | 544 | CG8977-PC | 14..522 | 8..524 | 557 | 27.8 | Plus |
CCT3-PB | 544 | CG8977-PB | 14..522 | 8..524 | 557 | 27.8 | Plus |
CCT3-PA | 544 | CG8977-PA | 14..522 | 8..524 | 557 | 27.8 | Plus |
CCT1-PA | 557 | CG5374-PA | 24..535 | 23..525 | 543 | 25.9 | Plus |
CCT1-PB | 557 | CG5374-PB | 24..535 | 23..525 | 543 | 25.9 | Plus |
CCT7-PA | 544 | CG8351-PA | 5..521 | 4..526 | 532 | 25.8 | Plus |
CCT2-PA | 535 | CG7033-PA | 8..522 | 4..525 | 527 | 26.5 | Plus |
CCT8-PA | 546 | CG8258-PA | 27..528 | 18..526 | 473 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14661-PA | 532 | GI14661-PA | 1..532 | 1..533 | 2590 | 93.6 | Plus |
Dmoj\GI20643-PA | 532 | GI20643-PA | 1..532 | 1..533 | 1796 | 64.4 | Plus |
Dmoj\GI17110-PA | 533 | GI17110-PA | 30..473 | 23..468 | 587 | 32.5 | Plus |
Dmoj\GI20138-PA | 541 | GI20138-PA | 34..534 | 19..523 | 561 | 31 | Plus |
Dmoj\GI10112-PA | 544 | GI10112-PA | 14..522 | 8..524 | 537 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12072-PA | 532 | GL12072-PA | 1..532 | 1..533 | 2498 | 89.9 | Plus |
Dper\GL18351-PA | 417 | GL18351-PA | 159..417 | 275..533 | 1347 | 97.3 | Plus |
Dper\GL18351-PA | 417 | GL18351-PA | 1..160 | 1..160 | 801 | 96.9 | Plus |
Dper\GL19739-PA | 533 | GL19739-PA | 30..473 | 23..468 | 561 | 31.8 | Plus |
Dper\GL11023-PA | 542 | GL11023-PA | 34..478 | 19..468 | 556 | 31 | Plus |
Dper\GL23334-PA | 557 | GL23334-PA | 24..535 | 23..525 | 506 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27623-PA | 531 | GA27623-PA | 1..531 | 1..533 | 2710 | 96.2 | Plus |
Dpse\GA26183-PA | 532 | GA26183-PA | 1..532 | 1..533 | 2486 | 89.5 | Plus |
Dpse\GA18950-PA | 533 | GA18950-PA | 30..473 | 23..468 | 560 | 31.8 | Plus |
Dpse\GA21078-PA | 542 | GA21078-PA | 34..478 | 19..468 | 556 | 31 | Plus |
Dpse\GA21448-PA | 544 | GA21448-PA | 14..460 | 8..469 | 535 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22574-PA | 485 | GM22574-PA | 1..485 | 1..533 | 2476 | 90.1 | Plus |
Dsec\GM26064-PA | 533 | GM26064-PA | 30..473 | 23..468 | 579 | 32.5 | Plus |
Dsec\GM21339-PA | 542 | GM21339-PA | 34..478 | 19..468 | 553 | 30.8 | Plus |
Dsec\GM15181-PA | 544 | GM15181-PA | 14..454 | 8..460 | 530 | 29.9 | Plus |
Dsec\GM13717-PA | 533 | GM13717-PA | 17..521 | 10..526 | 506 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22106-PA | 516 | GD22106-PA | 30..456 | 23..468 | 534 | 31.6 | Plus |
Dsim\GD19118-PA | 544 | GD19118-PA | 14..454 | 8..460 | 530 | 29.9 | Plus |
Dsim\T-cp1-PA | 557 | GD18453-PA | 24..535 | 23..525 | 507 | 25.9 | Plus |
Dsim\GD10130-PA | 546 | GD10130-PA | 27..532 | 18..527 | 433 | 27.6 | Plus |
Dsim\GD18576-PA | 436 | GD18576-PA | 4..417 | 3..468 | 428 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\T-cp1-PA | 532 | GJ14733-PA | 1..532 | 1..533 | 2616 | 95.1 | Plus |
Dvir\GJ21610-PA | 532 | GJ21610-PA | 1..532 | 1..533 | 1875 | 66.6 | Plus |
Dvir\GJ16148-PA | 533 | GJ16148-PA | 30..473 | 23..468 | 592 | 32.7 | Plus |
Dvir\GJ19908-PA | 541 | GJ19908-PA | 34..478 | 19..468 | 556 | 31 | Plus |
Dvir\GJ23334-PA | 544 | GJ23334-PA | 14..522 | 8..524 | 534 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10099-PA | 533 | GK10099-PA | 1..533 | 1..533 | 2635 | 95.3 | Plus |
Dwil\GK14617-PA | 533 | GK14617-PA | 30..473 | 23..468 | 582 | 32.7 | Plus |
Dwil\GK23011-PA | 542 | GK23011-PA | 34..534 | 19..523 | 566 | 30.6 | Plus |
Dwil\GK13436-PA | 544 | GK13436-PA | 14..452 | 8..458 | 527 | 29.8 | Plus |
Dwil\GK11257-PA | 544 | GK11257-PA | 5..521 | 4..526 | 511 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17214-PA | 533 | GE17214-PA | 1..533 | 1..533 | 2785 | 98.5 | Plus |
Dyak\GE12130-PA | 533 | GE12130-PA | 30..473 | 23..468 | 580 | 32.7 | Plus |
Dyak\GE12411-PA | 542 | GE12411-PA | 34..478 | 19..468 | 562 | 31.2 | Plus |
Dyak\GE24588-PA | 544 | GE24588-PA | 14..454 | 8..460 | 534 | 29.7 | Plus |
Dyak\GE24032-PA | 557 | GE24032-PA | 24..535 | 23..525 | 508 | 25.9 | Plus |
Translation from 102 to 1703
> GH13725.hyp MASISLLNPKAEFARAAQALAINISAAKGLQDVMRTNLGPKGTVKMLVSG AGDIKITKDGNVLLHEMQIQHPTASMIARASTAQDDSTGDGTTTTVMLIG ELLKQADIYLSEGLHPRIMTDGFEKARDKALEVLDQVKVPVEINKKNLVE VANTSLKTKVHPALADLLTDVCVNAVLTIASADKTKPVDLHMVELMEMQH KSDTDTQLVRGLVMDHGARHPDMPKRLENAYILTANVSLEYEKAEVNSGF FYKTAEEREAFVRAEREFIDQRVKKVIELKRSVCDGTDKTFVLINQKGID PISLDALAKEGILALRRAKRRNMERLSLACGGTAMNSFDDLQEEHLGYAG VVYEHVLGENKYTFVEDCKNPLSVTILIKGPNKHTITQIKDAIRDGLRAI NNTIADKALVPGAGAFEVRAYNELVAFKDTIKGKSRLAVQAFADALLVIP KTLAVNSGYDAQDTIVKLTVEDRLSPELVGLDLATGEPMKPVDLGVYDNY IVKKQILNSCSIIASNLLLVDEVMRAGMTSLKG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tcp-1zeta-PA | 533 | CG8231-PA | 1..533 | 1..533 | 2665 | 100 | Plus |
CG5525-PA | 533 | CG5525-PA | 30..529 | 23..524 | 591 | 29.5 | Plus |
Cct5-PA | 542 | CG8439-PA | 34..534 | 19..523 | 587 | 30.6 | Plus |
Cct5-PB | 512 | CG8439-PB | 8..504 | 23..523 | 583 | 30.6 | Plus |
Cctgamma-PD | 544 | CG8977-PD | 14..522 | 8..524 | 557 | 27.8 | Plus |