BDGP Sequence Production Resources |
Search the DGRC for GH13807
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 138 |
Well: | 7 |
Vector: | pOT2 |
Associated Gene/Transcript | Aats-met-RA |
Protein status: | GH13807.pep: gold |
Preliminary Size: | 1131 |
Sequenced Size: | 1872 |
Gene | Date | Evidence |
---|---|---|
CG8684 | 2001-01-01 | Release 2 assignment |
CG9612 | 2001-01-01 | Release 2 assignment |
CG31322 | 2001-11-12 | Blastp of sequenced clone |
CG31322 | 2003-01-01 | Sim4 clustering to Release 3 |
Aats-met | 2008-04-29 | Release 5.5 accounting |
Aats-met | 2008-08-15 | Release 5.9 accounting |
Aats-met | 2008-12-18 | 5.12 accounting |
1872 bp (1872 high quality bases) assembled on 2001-11-12
GenBank Submission: AY069128
> GH13807.complete TTTAGACGTTTTTTTTTTTTTTACTTATTTGTATATTAAAATAGCTTTTA AAGTGATGCTTATTAGAAGAATTAAGTGCCTCAGATATTTGGGAACTCGC TACAACAGTTCGCACTATGTGACAACTCCAATTTTCTATGTAAATGCAGC TCCTCACATTGGACACCTGTACTCAGCGGTCATAGCCGATGCCCACTGTC GCTACCAGAGGCTAAGGTATCCAGAGCAGGATGTACGACTCTGCACGGGA ACGGATGAGCACGGCACAAAGATCCAGCAGGCGGCATCTCTTCACGGGGT GCCCGTTGCCAAATACTGTGATGATATATCGCAGCGATATCGAGAGGTCT TCCGCAGTGCCAGCATCCAGCAGGATGACTTTATTCGCACCACGGAGGAT CGCCACAAGCGGGCAGTGGCCAATTTCTGGCGCACACTTCACACACGCGG CCACATATATTCGGCCGCCTACAGTGGTTGGTATTGCGTGTCTGACGAAA CCTTCCTCACCGACTCCCAGCTGAGATTGGACGAGGCCACTGGTACCCGA TACTCCCTGGAATCTGGACATCCCGTCGAGTGGACCGAGGAAACGAACTA TATGTTTCGACTGTCACAATTCCAGGACGATGTGCGCCATTGGGTGAAAA CGGAGGCGCGCGTACGTCCGGCCAAGTTCGAAAAGATTCTGCTGGATACG CTCAGCGAACCACTGCCGGATGTATCGGTATCACGTCCTTCCAACCGCGT ACACTGGGCCATTCCCGTTCCCGATGATGACTCGCAGACTGTCTACGTCT GGTTAGATGCTTTAGTCAACTATCTCAGCTCTGTGGGATATCCAGATGAA AAGTTTTCTGCCCACTGGCCACCGGCGCAGCAAGTGATAGGGAAGGACAT CCTCAAGTTCCATGGCATTTACTGGACAGCTTTCCTCCTGGCTGCCGGCT TGGAACCTCCTGGACAGCTGTACGTTCACTCGCATTGGACCGTCGATGGG CAGAAGATGTCAAAGAGCAAGCACAACGTGGTGGATCCCCTCCAGGCAGC GCAGCAGTACACCATGGAGGGCCTGCGATACTTCCTTCTGCGGGAGGGCG TGGCCCACAGCGATGGCAACTACAGCCACGTAAAGGCGCAGCGCATCCTC AACTCGGAGCTGGCGGACACCCTGGGCAATCTGCTATCGCGTGCCAGTGC CAAGTCGCTGAATCCCGGCCAAATCTATCCATCACCCAGCGCGGAGCACT TGGCGGATCTCCTCCGGAGCCTGGATGTGGCAAAACGCCTGCAGGATTCG CTTCTGCAGCTGTCAGAGCGATGCGAGTCGCATTATGAGTGCAATCACTT CCACTTGGTGGCCGACACAACGATGGCGGCTCTGCATGCGGCCAACAACT TCTTCGAGAGCTCCAAGCCCTGGACGCTAAAGGCGGGAGCACCGGATGGC AACCAGGCCCGTTTGGAGACCATAATCGCCATGACAATGGACGCGTTGCG GCTCAGCGGCATTGTGTTGCAGCCCATAATTCCCCAGCTGGCCAACCGGC TGCTCGATAAGCTGAGCGTCCCCACCGCGCAACGTGGCTGGAATTACTTG GCCGAGAGTTTTGCCACCAGCCCCAACAGCTCCAACAGTCCTGCGGGACT CGGCGAGAGCCGTCAATTGGACGGGCAAACCAGTGCGCTGCTCTTCCAGC GGATTCTCGAAGAGACGTCTGCGAAGGAAGTGAAGGAGCAGAAGCCGCAG CCAGCCAAGCGGAGCAAATCGAAGAAGAAGGAGCGCCGCGAAACAATGTC CTGAAGTGGCCGTAATAAACTGATTCCAAAGCCAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Aats-met-RA | 2346 | Aats-met-RA | 48..1872 | 11..1835 | 9125 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 10076338..10076857 | 1833..1314 | 2600 | 100 | Minus |
chr3R | 27901430 | chr3R | 10083785..10084208 | 853..430 | 2030 | 98.6 | Minus |
chr3R | 27901430 | chr3R | 10084289..10084571 | 430..148 | 1400 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 10083453..10083719 | 1118..852 | 1320 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 10077484..10077681 | 1316..1119 | 975 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 10084636..10084773 | 149..12 | 660 | 98.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 14251493..14252014 | 1835..1314 | 2610 | 100 | Minus |
3R | 32079331 | 3R | 14258963..14259386 | 853..430 | 2120 | 100 | Minus |
3R | 32079331 | 3R | 14259467..14259749 | 430..148 | 1415 | 100 | Minus |
3R | 32079331 | 3R | 14258631..14258897 | 1118..852 | 1335 | 100 | Minus |
3R | 32079331 | 3R | 14252631..14252828 | 1316..1119 | 990 | 100 | Minus |
3R | 32079331 | 3R | 14259814..14259952 | 149..11 | 695 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 13992324..13992845 | 1835..1314 | 2610 | 100 | Minus |
3R | 31820162 | 3R | 13999794..14000217 | 853..430 | 2120 | 100 | Minus |
3R | 31820162 | 3R | 14000298..14000580 | 430..148 | 1415 | 100 | Minus |
3R | 31820162 | 3R | 13999462..13999728 | 1118..852 | 1335 | 100 | Minus |
3R | 31820162 | 3R | 13993462..13993659 | 1316..1119 | 990 | 100 | Minus |
3R | 31820162 | 3R | 14000645..14000783 | 149..11 | 695 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 10084289..10084569 | 150..430 | 99 | <- | Minus |
chr3R | 10084636..10084762 | 23..149 | 98 | Minus | |
chr3R | 10076338..10076854 | 1317..1833 | 100 | <- | Minus |
chr3R | 10077484..10077681 | 1119..1316 | 99 | <- | Minus |
chr3R | 10083453..10083717 | 854..1118 | 99 | <- | Minus |
chr3R | 10083785..10084207 | 431..853 | 98 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-met-RA | 1..1749 | 56..1804 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-met-RA | 1..1749 | 56..1804 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-met-RA | 1..1749 | 56..1804 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-met-RA | 1..1749 | 56..1804 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-met-RA | 1..1749 | 56..1804 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-met-RA | 47..1857 | 23..1833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-met-RA | 47..1857 | 23..1833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-met-RA | 52..1862 | 23..1833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-met-RA | 47..1857 | 23..1833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-met-RA | 52..1862 | 23..1833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14259814..14259940 | 23..149 | 100 | Minus | |
3R | 14259467..14259747 | 150..430 | 100 | <- | Minus |
3R | 14258963..14259385 | 431..853 | 100 | <- | Minus |
3R | 14251495..14252011 | 1317..1833 | 100 | <- | Minus |
3R | 14252631..14252828 | 1119..1316 | 100 | <- | Minus |
3R | 14258631..14258895 | 854..1118 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14259814..14259940 | 23..149 | 100 | Minus | |
3R | 14259467..14259747 | 150..430 | 100 | <- | Minus |
3R | 14258963..14259385 | 431..853 | 100 | <- | Minus |
3R | 14251495..14252011 | 1317..1833 | 100 | <- | Minus |
3R | 14252631..14252828 | 1119..1316 | 100 | <- | Minus |
3R | 14258631..14258895 | 854..1118 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14259814..14259940 | 23..149 | 100 | Minus | |
3R | 14259467..14259747 | 150..430 | 100 | <- | Minus |
3R | 14258963..14259385 | 431..853 | 100 | <- | Minus |
3R | 14251495..14252011 | 1317..1833 | 100 | <- | Minus |
3R | 14252631..14252828 | 1119..1316 | 100 | <- | Minus |
3R | 14258631..14258895 | 854..1118 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 10078353..10078550 | 1119..1316 | 100 | <- | Minus |
arm_3R | 10077217..10077733 | 1317..1833 | 100 | <- | Minus |
arm_3R | 10084353..10084617 | 854..1118 | 100 | <- | Minus |
arm_3R | 10084685..10085107 | 431..853 | 100 | <- | Minus |
arm_3R | 10085189..10085469 | 150..430 | 100 | <- | Minus |
arm_3R | 10085536..10085662 | 23..149 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13999462..13999726 | 854..1118 | 100 | <- | Minus |
3R | 13992326..13992842 | 1317..1833 | 100 | <- | Minus |
3R | 13993462..13993659 | 1119..1316 | 100 | <- | Minus |
3R | 13999794..14000216 | 431..853 | 100 | <- | Minus |
3R | 14000298..14000578 | 150..430 | 100 | <- | Minus |
3R | 14000645..14000771 | 23..149 | 100 | Minus |
Translation from 23 to 1803
> GH13807.hyp TYLYIKIAFKVMLIRRIKCLRYLGTRYNSSHYVTTPIFYVNAAPHIGHLY SAVIADAHCRYQRLRYPEQDVRLCTGTDEHGTKIQQAASLHGVPVAKYCD DISQRYREVFRSASIQQDDFIRTTEDRHKRAVANFWRTLHTRGHIYSAAY SGWYCVSDETFLTDSQLRLDEATGTRYSLESGHPVEWTEETNYMFRLSQF QDDVRHWVKTEARVRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVP DDDSQTVYVWLDALVNYLSSVGYPDEKFSAHWPPAQQVIGKDILKFHGIY WTAFLLAAGLEPPGQLYVHSHWTVDGQKMSKSKHNVVDPLQAAQQYTMEG LRYFLLREGVAHSDGNYSHVKAQRILNSELADTLGNLLSRASAKSLNPGQ IYPSPSAEHLADLLRSLDVAKRLQDSLLQLSERCESHYECNHFHLVADTT MAALHAANNFFESSKPWTLKAGAPDGNQARLETIIAMTMDALRLSGIVLQ PIIPQLANRLLDKLSVPTAQRGWNYLAESFATSPNSSNSPAGLGESRQLD GQTSALLFQRILEETSAKEVKEQKPQPAKRSKSKKKERRETMS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Aats-met-PC | 582 | CG31322-PC | 1..582 | 12..593 | 3061 | 100 | Plus |
Aats-met-PB | 582 | CG31322-PB | 1..582 | 12..593 | 3061 | 100 | Plus |
Aats-met-PA | 582 | CG31322-PA | 1..582 | 12..593 | 3061 | 100 | Plus |
CG15100-PA | 1022 | CG15100-PA | 258..764 | 33..515 | 274 | 23.5 | Plus |
Translation from 55 to 1803
> GH13807.pep MLIRRIKCLRYLGTRYNSSHYVTTPIFYVNAAPHIGHLYSAVIADAHCRY QRLRYPEQDVRLCTGTDEHGTKIQQAASLHGVPVAKYCDDISQRYREVFR SASIQQDDFIRTTEDRHKRAVANFWRTLHTRGHIYSAAYSGWYCVSDETF LTDSQLRLDEATGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKTE ARVRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDDSQTVYVWL DALVNYLSSVGYPDEKFSAHWPPAQQVIGKDILKFHGIYWTAFLLAAGLE PPGQLYVHSHWTVDGQKMSKSKHNVVDPLQAAQQYTMEGLRYFLLREGVA HSDGNYSHVKAQRILNSELADTLGNLLSRASAKSLNPGQIYPSPSAEHLA DLLRSLDVAKRLQDSLLQLSERCESHYECNHFHLVADTTMAALHAANNFF ESSKPWTLKAGAPDGNQARLETIIAMTMDALRLSGIVLQPIIPQLANRLL DKLSVPTAQRGWNYLAESFATSPNSSNSPAGLGESRQLDGQTSALLFQRI LEETSAKEVKEQKPQPAKRSKSKKKERRETMS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18774-PA | 568 | GF18774-PA | 1..560 | 1..569 | 2555 | 84 | Plus |
Dana\GF13746-PA | 1020 | GF13746-PA | 258..764 | 22..504 | 265 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21397-PA | 579 | GG21397-PA | 1..564 | 1..567 | 2880 | 94 | Plus |
Dere\GG20938-PA | 1021 | GG20938-PA | 258..764 | 22..504 | 263 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19679-PA | 578 | GH19679-PA | 1..572 | 1..577 | 2382 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MetRS-m-PC | 582 | CG31322-PC | 1..582 | 1..582 | 3061 | 100 | Plus |
MetRS-m-PB | 582 | CG31322-PB | 1..582 | 1..582 | 3061 | 100 | Plus |
MetRS-m-PA | 582 | CG31322-PA | 1..582 | 1..582 | 3061 | 100 | Plus |
MetRS-PA | 1022 | CG15100-PA | 258..764 | 22..504 | 274 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24536-PA | 579 | GI24536-PA | 1..579 | 1..582 | 2407 | 75.9 | Plus |
Dmoj\GI20156-PA | 1032 | GI20156-PA | 258..764 | 22..504 | 265 | 24.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23293-PA | 592 | GL23293-PA | 1..577 | 1..575 | 2533 | 82.5 | Plus |
Dper\GL10845-PA | 1021 | GL10845-PA | 258..764 | 22..504 | 280 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16180-PA | 588 | GA16180-PA | 1..573 | 1..575 | 2531 | 82.8 | Plus |
Dpse\GA13491-PA | 1021 | GA13491-PA | 258..764 | 22..504 | 282 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25865-PA | 582 | GM25865-PA | 1..582 | 1..582 | 3059 | 97.1 | Plus |
Dsec\GM19865-PA | 1022 | GM19865-PA | 258..764 | 22..504 | 258 | 23.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20436-PA | 582 | GD20436-PA | 1..582 | 1..582 | 3056 | 97.1 | Plus |
Dsim\GD25352-PA | 1022 | GD25352-PA | 258..764 | 22..504 | 263 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22603-PA | 583 | GJ22603-PA | 1..581 | 1..582 | 2392 | 75.7 | Plus |
Dvir\GJ22433-PA | 1016 | GJ22433-PA | 258..764 | 22..504 | 254 | 24.1 | Plus |