BDGP Sequence Production Resources |
Search the DGRC for GH13810
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 138 |
Well: | 10 |
Vector: | pOT2 |
Associated Gene/Transcript | ebd1-RA |
Protein status: | GH13810.pep: gold |
Preliminary Size: | 2319 |
Sequenced Size: | 2324 |
Gene | Date | Evidence |
---|---|---|
CG3371 | 2001-01-01 | Release 2 assignment |
CG3371 | 2002-03-19 | Blastp of sequenced clone |
CG3371 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3371 | 2008-04-29 | Release 5.5 accounting |
CG3371 | 2008-08-15 | Release 5.9 accounting |
CG3371 | 2008-12-18 | 5.12 accounting |
2324 bp (2324 high quality bases) assembled on 2002-03-19
GenBank Submission: AY094709
> GH13810.complete TCTAGTTCGCACGGACATCGGAAAATACGCAAGGTGCAGCGCACGGCCAG TTGGAAAATCACAATCAGAAGACAAATCGAGTGCCTAGGAAGAGAAAACG AAAGCGAATAGAGCCAAAGCGCATTGAAAGGCCAAAGAAAAGCGAGAAAA GCAGTGACGAAATGATTTGAATTCGCTTGACAGTCAACGCGCATAATCGT AGCCATCGCACACACACAGCCGCACGGACACACACACACAGGCGGGCGGG TGTGTGAGTGAGAGAGCAGAAAGGGTGCAAGGGGTGGGCGAAATTGAGTG GGCGCAGCAGCAGCAACAAAAACAAACAAGACGAAAACAAACGGCAATTG CCGTGTAAATTGCACGGAAAGCACAAACAATGCGGATACGCGAAAAACGC AAGTTGCAGAGGGAGCTGAGGGTGGAGAAGCGCGTGGAGAGGGAGAAAAA GGAGCACAAGGAGGCCTCCAAGACGCAGGACAACAACAACAAGGCGAAGG CCACTGACACGGAGGTTCTCACACCAGCTCCTGCGCCTGCGCCTGCTCCA CCAGCAGCACCCACTTCGACTGCATCACCCACACCCACTAGCACGCACAC CCCCAGCCTGCCGGCCGCCGAGAAGGTGGCCTTCGACAATCGCATCAAGC GCAAGAATGTCCTGGCCCTCAACGAAAAGGTTGCTGCTCTGCGGGAATAC GATCGGCTGCCGGTTTATAAGCACGTTGGCCGGCTGTTCAACTGCAGCCC AGATCAGATCAAGCGGATCGTGCAGCAGCGCGCTGAGATTCTGAACGCGT GGGATCAGCGAACCCGCAGGAGCCAGGACGCCAAGACCATGGAGACGAAG ACCGTCAGGGTCTCGATGTTGGGCAAGGCCGTGTACGATTGGATACGCCG CATGATGTACTACAAGGACTTCAGCATCTCCGACGGACTCATCCAGAAGA TGGCGCTGCAGTTCAAGAGCTCCATGAACCTGGCACATTTCTTTCCGCAC CAGGAGTGGTGCGACAAGTTCAGACGCACCTACAGCATCCAACACAGCGA CACCAGACTGTTGAAGATAGGCTACACGCAGGGCTACTCGGTGCAGATCA AGGACATCGTCAAGGACGTCATGTCGGAAAGCATGCCGGAAAGTGGGCCA CGGAACGGCGAGGAGGATGACGAAGAGGTCAGCTTGGGCAGCCCGGTGAG CAGCCATCCCCGCAGCTATGTAGAAGACGAGGATGACGAGGTGGATGTCG ACGGTGGCGGTATTAGCGGCGAGGATGATCTGGAGGAGGAGCCTGATGTC AAGCCCTCACTAAGCGAACTAAATTTTGCCAGGGCTCTGAAGCCCTTGCC GCCTCTAGTTAGACTGCCCCTCCAAGCTAACACACCGCCAGGCACCACTC AAAAAGTTCTCCTGGCCACACCCATTGTTCCGACGCAAGCGGGCGGACAG CCCATGACCATGACCATCATACCACTAGCCACGCTCGCTCAGAGCATCAC CAAGATTCCTGCCCCACAGCAGCAGGACAAAGGACCGGTGGTACCGCCGC CCAAACTAGAGATCAAGCAGGAAAAGGAAATCAAAGTGGAGCCCAAGGAC CCGGAAGAGCTCCTGGCGAAGCAGCCCGAGGCGGAGCTCCAGGAGAACGA TGACCGAGCACAAAGGGAAAAGGATCTTGAAATTCCGCCTACAGTGCACA TAAAAGTGGAGCCAGAGGCTGAGCTGGAATCGGAACTGGACCAAGACCCA GCGGATCTCGATGAAGACGCGAACAATGGTCGCTCCAGTGTCACCTCGCT GGCCGAGGTTCTGGCGGCCAATGTGGAGGACGAGATGGAGTACATCGAGC AGATGCGGCAGCGAAAGGTGAGTTCGCCTGCGGCAGTTGAAAACTCGCTG AATCCTCGCCAGGGCACCAAACGTCGCTATGAGTCCGCCCAAGACGATAA CAACAATGGGGGATCCGGCCAAGAAAGTGGGTCCAGTGTCATCAGCTGCG CCGATGCACGCAAGTACCTAAAGCTACTCGAGGAGTTTGCTCTGTACAAG GAGAACTACCGGCTGATTGAGCTGATCACACGAGCCGATGAAGTGATGCG CGAAATGGATGACAATGTGCCGTAGAATGCTCCAAACAGTGAGCGCCACA TGAAGGAGAACGAAGAGGAGGAGGAATAGCTGCAGCCAAAGAGTGTAATC TTTGCAAACTGATGCATCTAGAAGATGCACATCGGTCGGATGCAATCAAT CATTAGATCTAAGGTGAACATAATTTGTATTCGAACCAAATAAACGCAAT CAAACCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3371-RA | 2534 | CG3371-RA | 161..2468 | 1..2308 | 11540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 682674..684480 | 500..2306 | 99 | <- | Minus |
chr3L | 684825..685326 | 1..499 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3371-RA | 1..1746 | 380..2125 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3371-RA | 1..1746 | 380..2125 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ebd1-RA | 1..1746 | 380..2125 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3371-RA | 1..1746 | 380..2125 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ebd1-RA | 1..1746 | 380..2125 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3371-RA | 20..2325 | 1..2306 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3371-RA | 20..2325 | 1..2306 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ebd1-RA | 24..2329 | 1..2306 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3371-RA | 20..2325 | 1..2306 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ebd1-RA | 24..2329 | 1..2306 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 682885..684691 | 500..2306 | 100 | <- | Minus |
3L | 685028..685526 | 1..499 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 682885..684691 | 500..2306 | 100 | <- | Minus |
3L | 685028..685526 | 1..499 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 682885..684691 | 500..2306 | 100 | <- | Minus |
3L | 685028..685526 | 1..499 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 682885..684691 | 500..2306 | 100 | <- | Minus |
arm_3L | 685028..685526 | 1..499 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 682885..684691 | 500..2306 | 100 | <- | Minus |
3L | 685028..685526 | 1..499 | 100 | Minus |
Translation from 379 to 2124
> GH13810.pep MRIREKRKLQRELRVEKRVEREKKEHKEASKTQDNNNKAKATDTEVLTPA PAPAPAPPAAPTSTASPTPTSTHTPSLPAAEKVAFDNRIKRKNVLALNEK VAALREYDRLPVYKHVGRLFNCSPDQIKRIVQQRAEILNAWDQRTRRSQD AKTMETKTVRVSMLGKAVYDWIRRMMYYKDFSISDGLIQKMALQFKSSMN LAHFFPHQEWCDKFRRTYSIQHSDTRLLKIGYTQGYSVQIKDIVKDVMSE SMPESGPRNGEEDDEEVSLGSPVSSHPRSYVEDEDDEVDVDGGGISGEDD LEEEPDVKPSLSELNFARALKPLPPLVRLPLQANTPPGTTQKVLLATPIV PTQAGGQPMTMTIIPLATLAQSITKIPAPQQQDKGPVVPPPKLEIKQEKE IKVEPKDPEELLAKQPEAELQENDDRAQREKDLEIPPTVHIKVEPEAELE SELDQDPADLDEDANNGRSSVTSLAEVLAANVEDEMEYIEQMRQRKVSSP AAVENSLNPRQGTKRRYESAQDDNNNGGSGQESGSSVISCADARKYLKLL EEFALYKENYRLIELITRADEVMREMDDNVP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24076-PA | 589 | GF24076-PA | 1..586 | 1..578 | 1928 | 71.5 | Plus |
Dana\GF24070-PA | 485 | GF24070-PA | 21..173 | 92..244 | 231 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14647-PA | 582 | GG14647-PA | 1..582 | 1..581 | 2470 | 93 | Plus |
Dere\GG14642-PA | 498 | GG14642-PA | 19..171 | 92..244 | 255 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16041-PA | 604 | GH16041-PA | 2..603 | 18..578 | 1230 | 51 | Plus |
Dgri\GH16035-PA | 551 | GH16035-PA | 20..158 | 92..228 | 266 | 35.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ebd1-PA | 581 | CG3371-PA | 1..581 | 1..581 | 2979 | 100 | Plus |
CG13895-PA | 499 | CG13895-PA | 19..171 | 92..244 | 250 | 35.7 | Plus |
CG13895-PB | 506 | CG13895-PB | 26..178 | 92..244 | 250 | 35.7 | Plus |
ebd2-PB | 367 | CG12972-PB | 25..259 | 87..313 | 157 | 22.7 | Plus |
ebd2-PA | 367 | CG12972-PA | 25..259 | 87..313 | 157 | 22.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12299-PA | 523 | GI12299-PA | 17..156 | 92..228 | 241 | 31.4 | Plus |
Dmoj\GI12305-PA | 106 | GI12305-PA | 54..104 | 522..579 | 183 | 60.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20839-PA | 576 | GL20839-PA | 45..573 | 64..578 | 1636 | 68.6 | Plus |
Dper\GL24585-PA | 355 | GL24585-PA | 17..234 | 87..291 | 163 | 24.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17411-PA | 576 | GA17411-PA | 45..573 | 64..578 | 1601 | 68.8 | Plus |
Dpse\GA12609-PA | 508 | GA12609-PA | 16..154 | 88..227 | 256 | 34.3 | Plus |
Dpse\GA11947-PA | 355 | GA11947-PA | 17..234 | 87..291 | 164 | 24.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14262-PA | 581 | GM14262-PA | 1..581 | 1..581 | 2970 | 96.4 | Plus |
Dsec\GM14257-PA | 469 | GM14257-PA | 17..125 | 92..199 | 211 | 38.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13519-PA | 581 | GD13519-PA | 1..581 | 1..581 | 2635 | 95.9 | Plus |
Dsim\GD13514-PA | 493 | GD13514-PA | 17..169 | 92..244 | 252 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13241-PA | 557 | GJ13241-PA | 1..557 | 1..577 | 1405 | 55.5 | Plus |
Dvir\GJ13236-PA | 532 | GJ13236-PA | 21..174 | 92..244 | 257 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16684-PA | 620 | GK16684-PA | 88..620 | 77..581 | 1554 | 66.1 | Plus |
Dwil\GK16679-PA | 504 | GK16679-PA | 6..203 | 86..277 | 260 | 30.7 | Plus |
Dwil\GK20421-PA | 392 | GK20421-PA | 34..180 | 87..232 | 152 | 25.3 | Plus |
Translation from 379 to 2124
> GH13810.hyp MRIREKRKLQRELRVEKRVEREKKEHKEASKTQDNNNKAKATDTEVLTPA PAPAPAPPAAPTSTASPTPTSTHTPSLPAAEKVAFDNRIKRKNVLALNEK VAALREYDRLPVYKHVGRLFNCSPDQIKRIVQQRAEILNAWDQRTRRSQD AKTMETKTVRVSMLGKAVYDWIRRMMYYKDFSISDGLIQKMALQFKSSMN LAHFFPHQEWCDKFRRTYSIQHSDTRLLKIGYTQGYSVQIKDIVKDVMSE SMPESGPRNGEEDDEEVSLGSPVSSHPRSYVEDEDDEVDVDGGGISGEDD LEEEPDVKPSLSELNFARALKPLPPLVRLPLQANTPPGTTQKVLLATPIV PTQAGGQPMTMTIIPLATLAQSITKIPAPQQQDKGPVVPPPKLEIKQEKE IKVEPKDPEELLAKQPEAELQENDDRAQREKDLEIPPTVHIKVEPEAELE SELDQDPADLDEDANNGRSSVTSLAEVLAANVEDEMEYIEQMRQRKVSSP AAVENSLNPRQGTKRRYESAQDDNNNGGSGQESGSSVISCADARKYLKLL EEFALYKENYRLIELITRADEVMREMDDNVP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ebd1-PA | 581 | CG3371-PA | 1..581 | 1..581 | 2979 | 100 | Plus |
CG13895-PA | 499 | CG13895-PA | 19..171 | 92..244 | 250 | 35.7 | Plus |
CG13895-PB | 506 | CG13895-PB | 26..178 | 92..244 | 250 | 35.7 | Plus |
ebd2-PB | 367 | CG12972-PB | 25..259 | 87..313 | 157 | 22.7 | Plus |
ebd2-PA | 367 | CG12972-PA | 25..259 | 87..313 | 157 | 22.7 | Plus |