BDGP Sequence Production Resources |
Search the DGRC for GH13823
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 138 |
Well: | 23 |
Vector: | pOT2 |
Associated Gene/Transcript | CG13630-RA |
Protein status: | GH13823.pep: gold |
Preliminary Size: | 1125 |
Sequenced Size: | 1286 |
Gene | Date | Evidence |
---|---|---|
CG13630 | 2001-01-01 | Release 2 assignment |
CG13630 | 2001-09-19 | Blastp of sequenced clone |
CG13630 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13630 | 2008-04-29 | Release 5.5 accounting |
CG13630 | 2008-08-15 | Release 5.9 accounting |
CG13630 | 2008-12-18 | 5.12 accounting |
1286 bp (1286 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058368
> GH13823.complete CTATTTTTGGCAGGCACGGAAATTTTTCTCGCATTAATTGTTGAAATAGA ATGACTCAAAAGTGCGAGACAACCAACTGCGGCAAGGATGCGACCCTGCA GTGTCCCACCTGCCTAAAGTTGGGCATCAAGGGCTCATTTTTCTGCTCGC AGCCGTGCTTCAAAGGATTCTGGAAGGAGCACAAGGCGATTCATGCTTTA GCAGCCGGTGCCTCGAACTCTGCCGAACAGGATGGAGCCTACAATCCATG GCCACATTTCCGCTTCACCGGCAAGCTCCGCCCGTTCCCACAGACTCCCA AGCGAACAGTTCCGAACGCCATACAACGTCCAGATTACGCCGATCATCCA GCAGGACGTTCACTCTCGGAGGAAGCACTGCGGGGCACCAAGATTAAGGT GCTGGACGACGAGGAGATCGAGGGCATGCGAGTGGCCGGCAGATTGGGTC GAGAATGCTTGGATGAGGGTGCCAAAGCCGTGGAGGTGGGCATCACCACC GACGAACTGGATCGTTTGGTCCACGAGGCCGCCATCGAACGGGAGTGCTA TCCGTCGCCCCTCAACTACTACAACTTCCCCAAGTCCTGTTGCACATCGG TCAACGAGGTGATTTGCCACGGCATCCCCGATCAGCGTCCTCTACAGGAT GGAGATCTATGTAACATCGATGTGACCGTCTATCATCGCGGCTTCCATGG TGATCTCAACGAGACCTTCTTTGTGGGCAATGTCTCGGAGAAGCACAAGA AACTGGTGCAGGTCACCCACGAGGCGCTCAGCAAGGCCATTGAGTTCGTG CGTCCGGGTGAAAAGTATCGCGATATTGGCAACGTGATCCAAAAGTATGT GGCACCACATGGATTCAGCGTGGTGCGCAGCTATTGCGGTCATGGCATTC ACCGTGTTTTCCACACAGCTCCCAATGTGCCTCACTATGCCAAAAACTCT GCCGTAGGAGTAATGGCCCCTGGCCACTGCTTCACCATCGAGCCCATGAT CTCCGTTGGCGTCCAGAAGGCTGAAACCTGGCCAGATGACTGGACTGCTG TGACCGCCGATGGCCTGTACTCCGCCCAGTTTGAGCAGACACTGCTGGTC AACGAAACCGGATGCGAGATTCTCACCAAGCGTCGCGAGAACAACGGACA GCCGTGGTTCATGGACAAGATGTGAGGGTCGACCAACTTGGGCTAATACA TAACTTCTAGGGCTATCGATCAAGCTTTAATTTGTAATTTTACAATAAAA TCTAGAGTTTTTATTCCCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 20541541..20542281 | 942..202 | 3645 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 20541157..20541495 | 1268..930 | 1605 | 98.2 | Minus |
chr3R | 27901430 | chr3R | 20542348..20542551 | 204..1 | 1005 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 24718321..24719061 | 942..202 | 3705 | 100 | Minus |
3R | 32079331 | 3R | 24717935..24718275 | 1270..930 | 1645 | 98.8 | Minus |
3R | 32079331 | 3R | 24719128..24719331 | 204..1 | 1020 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 24459152..24459892 | 942..202 | 3705 | 100 | Minus |
3R | 31820162 | 3R | 24458766..24459106 | 1270..930 | 1645 | 98.8 | Minus |
3R | 31820162 | 3R | 24459959..24460162 | 204..1 | 1020 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 20541157..20541482 | 943..1268 | 99 | <- | Minus |
chr3R | 20541541..20542278 | 205..942 | 99 | <- | Minus |
chr3R | 20542348..20542551 | 1..204 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13630-RA | 1..1125 | 51..1175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13630-RA | 1..1125 | 51..1175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13630-RA | 1..1125 | 51..1175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13630-RA | 1..1125 | 51..1175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13630-RA | 1..1125 | 51..1175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13630-RA | 32..1299 | 1..1268 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13630-RA | 32..1299 | 1..1268 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13630-RA | 34..1301 | 1..1268 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13630-RA | 32..1299 | 1..1268 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13630-RA | 34..1301 | 1..1268 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24717937..24718262 | 943..1268 | 100 | <- | Minus |
3R | 24718321..24719058 | 205..942 | 100 | <- | Minus |
3R | 24719128..24719331 | 1..204 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24717937..24718262 | 943..1268 | 100 | <- | Minus |
3R | 24718321..24719058 | 205..942 | 100 | <- | Minus |
3R | 24719128..24719331 | 1..204 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24717937..24718262 | 943..1268 | 100 | <- | Minus |
3R | 24718321..24719058 | 205..942 | 100 | <- | Minus |
3R | 24719128..24719331 | 1..204 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 20543659..20543984 | 943..1268 | 100 | <- | Minus |
arm_3R | 20544043..20544780 | 205..942 | 100 | <- | Minus |
arm_3R | 20544850..20545053 | 1..204 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24458768..24459093 | 943..1268 | 100 | <- | Minus |
3R | 24459152..24459889 | 205..942 | 100 | <- | Minus |
3R | 24459959..24460162 | 1..204 | 100 | Minus |
Translation from 50 to 1174
> GH13823.pep MTQKCETTNCGKDATLQCPTCLKLGIKGSFFCSQPCFKGFWKEHKAIHAL AAGASNSAEQDGAYNPWPHFRFTGKLRPFPQTPKRTVPNAIQRPDYADHP AGRSLSEEALRGTKIKVLDDEEIEGMRVAGRLGRECLDEGAKAVEVGITT DELDRLVHEAAIERECYPSPLNYYNFPKSCCTSVNEVICHGIPDQRPLQD GDLCNIDVTVYHRGFHGDLNETFFVGNVSEKHKKLVQVTHEALSKAIEFV RPGEKYRDIGNVIQKYVAPHGFSVVRSYCGHGIHRVFHTAPNVPHYAKNS AVGVMAPGHCFTIEPMISVGVQKAETWPDDWTAVTADGLYSAQFEQTLLV NETGCEILTKRRENNGQPWFMDKM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17756-PA | 373 | GF17756-PA | 1..373 | 1..374 | 1900 | 92.8 | Plus |
Dana\GF15789-PA | 316 | GF15789-PA | 43..315 | 82..360 | 630 | 44.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12327-PA | 374 | GG12327-PA | 1..374 | 1..374 | 2015 | 99.2 | Plus |
Dere\GG10132-PA | 317 | GG10132-PA | 43..315 | 82..360 | 616 | 43.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19130-PA | 374 | GH19130-PA | 1..374 | 1..374 | 1835 | 88.8 | Plus |
Dgri\GH13612-PA | 294 | GH13612-PA | 9..292 | 67..361 | 595 | 41 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13630-PA | 374 | CG13630-PA | 1..374 | 1..374 | 2048 | 100 | Plus |
CG5188-PA | 317 | CG5188-PA | 30..315 | 73..360 | 628 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23587-PA | 374 | GI23587-PA | 1..374 | 1..374 | 1824 | 88.2 | Plus |
Dmoj\GI20466-PA | 284 | GI20466-PA | 38..282 | 116..361 | 628 | 48.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13868-PA | 344 | GL13868-PA | 1..344 | 1..374 | 1619 | 80.7 | Plus |
Dper\GL19147-PA | 315 | GL19147-PA | 29..315 | 71..363 | 585 | 41.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12422-PA | 374 | GA12422-PA | 1..374 | 1..374 | 1822 | 88.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23468-PA | 374 | GM23468-PA | 1..374 | 1..374 | 2022 | 99.5 | Plus |
Dsec\GM18394-PA | 317 | GM18394-PA | 43..315 | 82..360 | 632 | 43.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18276-PA | 329 | GD18276-PA | 1..329 | 1..374 | 1710 | 87.2 | Plus |
Dsim\GD23701-PA | 317 | GD23701-PA | 30..315 | 73..360 | 631 | 43.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23563-PA | 374 | GJ23563-PA | 1..374 | 1..374 | 1820 | 87.7 | Plus |
Dvir\GJ13807-PA | 294 | GJ13807-PA | 10..292 | 67..360 | 636 | 44.6 | Plus |
Translation from 50 to 1174
> GH13823.hyp MTQKCETTNCGKDATLQCPTCLKLGIKGSFFCSQPCFKGFWKEHKAIHAL AAGASNSAEQDGAYNPWPHFRFTGKLRPFPQTPKRTVPNAIQRPDYADHP AGRSLSEEALRGTKIKVLDDEEIEGMRVAGRLGRECLDEGAKAVEVGITT DELDRLVHEAAIERECYPSPLNYYNFPKSCCTSVNEVICHGIPDQRPLQD GDLCNIDVTVYHRGFHGDLNETFFVGNVSEKHKKLVQVTHEALSKAIEFV RPGEKYRDIGNVIQKYVAPHGFSVVRSYCGHGIHRVFHTAPNVPHYAKNS AVGVMAPGHCFTIEPMISVGVQKAETWPDDWTAVTADGLYSAQFEQTLLV NETGCEILTKRRENNGQPWFMDKM*