BDGP Sequence Production Resources |
Search the DGRC for GH13824
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 138 |
Well: | 24 |
Vector: | pOT2 |
Associated Gene/Transcript | Orc2-RA |
Protein status: | GH13824.pep: gold |
Preliminary Size: | 1947 |
Sequenced Size: | 1984 |
Gene | Date | Evidence |
---|---|---|
CG3041 | 2001-01-01 | Release 2 assignment |
CG3041 | 2001-07-04 | Blastp of sequenced clone |
CG3041 | 2003-01-01 | Sim4 clustering to Release 3 |
Orc2 | 2008-04-29 | Release 5.5 accounting |
Orc2 | 2008-08-15 | Release 5.9 accounting |
Orc2 | 2008-12-18 | 5.12 accounting |
1984 bp (1984 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051471
> GH13824.complete CCACTTCTGAGCATTGATGAAGTGGCAAGCGTCATGAGTGCCAGCAACAA AGGCGGTTACAAGACGCCGCGGAAGGAGAACCTCATGTCCATTGAGAACC TCACCAATTCGGAGGAGGAATCCGAGGACTTGAACACGGCAATGGTTGGG AATGCAGTGGAATCTCAGCCCAAGGTCACCAGTCGGCGTTCCACCCGACG TCCAAGTCCCACCAAGAAATACCAGGCGTACCAGAAGGAAAGCAATGGAA AAGGCCAGGAAGAGCGAATTGTTGTGAACTATGTGGAAATGTCCGATGAA CGGAGCAGCGATGCGGAGGATCAGGAAGAAGAAGAAAGCATCGAGGAGTC GGAAAATGCTGCCCGTCCCGCTGCCAAGGATCTGCATCTCATCCAATCCG AGTACAATGTGGCCGGCACCAGCATGTTTGGCTTCAATACGCCCAAGAAA CGCGATGCCATGGCACTGGCCGCCCTAAATGCCACGCCCTGCACGCCCAA GACCCCAAAAACGCCGCGTTTGGGTGTCAAGACGCCGGATACGAAGCGCA AGAAGTCCATGGATCAGCCAAAGACTCCCGCCCATGTGCGCACCCGCGTC AAGAAGCAGATTGCCAAAATAGTGGCCGACTCAGATGAGGATTTTTCTGG AGATGAAAGCGATTTCCGGCCCAGTGACGAGGAATCCTCCTCCAGCAGCA GTAGCAGCGATGCTGGCAACTCCTCTGACAACGACGCCGCCGATGATGAG CCCAAAACGCCCAGTAGAGCCCGCCGTGCCATTGTAGTCCCCGTTCTGCC GAAAACTCCATCGGCAGCCCGCCTGCGACAATCGGCGAGGGCGAAAAAAT CGAATGAGTTTGTGCCCGAGAGCGATGGTTACTTTCACTCGCATGCCAGC AGCAAGATCCTCACTTCGGATCACACCTTGGATCGCCTAAAGAATCCTCG CCTGGCCGCCGATCGTGTTTTCAGTTTGCTGTCGGAAATCAAGACATCGG CGGAGCATGAGGGTTCTATTAATGCCATTATGGAGGAGTATCGATCGTAC TTTCCCAAGTGGATGTGTATTCTGAACGAAGGCTTCAATATACTTCTATA TGGATTGGGCTCCAAGCACCAGCTGCTGCAGTCATTCCATCGGGAAGTTT TGCATAAGCAAACGGTATTGGTGGTGAATGGCTTCTTTCCCAGTCTGACC ATCAAGGATATGCTGGATAGCATCACAAGCGACATATTAGATGCGGGCAT TAGTCCGGCTAATCCACATGAAGCAGTGGATATGATCGAGGAGGAGTTCG CACTGATACCGGAAACACATTTGTTCTTAATCGTCCATAATCTGGATGGA GCCATGCTTCGCAATGTGAAGGCACAGGCGATTCTTTCGCGCCTGGCGCG CATACCGAACATTCATCTACTGGCCTCCATTGATCACATAAATACCCCAC TTTTGTGGGACCAGGGAAAGCTGTGCAGCTTCAACTTCTCGTGGTGGGAC TGCACAACAATGCTGCCATATACGAACGAAACTGCGTTCGAGAACTCGCT GCTGGTGCAGAATTCCGGCGAATTGGCCCTCTCCTCGATGCGCAGTGTCT TCTCATCGCTAACGACCAATTCGCGTGGCATTTACATGCTGATTGTTAAG TATCAATTGAAGAACAAGGGCAATGCCACATACCAGGGCATGCCGTTCAG GGATCTCTATTCGAGTTGTCGCGAAGCATTTTTGGTCAGCTCAGATCTGG CACTGCGTGCCCAGCTCACCGAGTTCCTCGACCACAAGCTGGTCAAATCG AAACGGAGCGTTGATGGCTCCGAACAGCTAACCATTCCCATTGATGGCGC ACTGCTGCAGCAGTTTCTCGAGGAGCAGGAGAAGAAATAGGCCATCGGCG TAATTTTAGAACATATTAATTTATTATCTAATATTGTTAAATACAATTAC AATTTCGCTTTTTAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 9790560..9791403 | 608..1451 | 4220 | 100 | Plus |
chr3R | 27901430 | chr3R | 9789902..9790491 | 18..607 | 2950 | 100 | Plus |
chr3R | 27901430 | chr3R | 9791476..9791985 | 1454..1963 | 2550 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 13965650..13966493 | 608..1451 | 4220 | 100 | Plus |
3R | 32079331 | 3R | 13964992..13965581 | 18..607 | 2950 | 100 | Plus |
3R | 32079331 | 3R | 13966566..13967080 | 1454..1968 | 2575 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 13706481..13707324 | 608..1451 | 4220 | 100 | Plus |
3R | 31820162 | 3R | 13705823..13706412 | 18..607 | 2950 | 100 | Plus |
3R | 31820162 | 3R | 13707397..13707911 | 1454..1968 | 2575 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 9790560..9791405 | 608..1453 | 99 | -> | Plus |
chr3R | 9789827..9789843 | 1..17 | 100 | -> | Plus |
chr3R | 9789902..9790491 | 18..607 | 100 | -> | Plus |
chr3R | 9791476..9791985 | 1454..1963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc2-RA | 1..1857 | 34..1890 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc2-RA | 1..1857 | 34..1890 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc2-RA | 1..1857 | 34..1890 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc2-RA | 1..1857 | 34..1890 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc2-RA | 1..1857 | 34..1890 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc2-RA | 1..1963 | 1..1963 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc2-RA | 1..1963 | 1..1963 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc2-RA | 33..1995 | 1..1963 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc2-RA | 1..1963 | 1..1963 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Orc2-RA | 33..1995 | 1..1963 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13964917..13964933 | 1..17 | 100 | -> | Plus |
3R | 13964992..13965581 | 18..607 | 100 | -> | Plus |
3R | 13965650..13966495 | 608..1453 | 99 | -> | Plus |
3R | 13966566..13967075 | 1454..1963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13964917..13964933 | 1..17 | 100 | -> | Plus |
3R | 13964992..13965581 | 18..607 | 100 | -> | Plus |
3R | 13965650..13966495 | 608..1453 | 99 | -> | Plus |
3R | 13966566..13967075 | 1454..1963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13964917..13964933 | 1..17 | 100 | -> | Plus |
3R | 13964992..13965581 | 18..607 | 100 | -> | Plus |
3R | 13965650..13966495 | 608..1453 | 99 | -> | Plus |
3R | 13966566..13967075 | 1454..1963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 9790639..9790655 | 1..17 | 100 | -> | Plus |
arm_3R | 9790714..9791303 | 18..607 | 100 | -> | Plus |
arm_3R | 9791372..9792217 | 608..1453 | 99 | -> | Plus |
arm_3R | 9792288..9792797 | 1454..1963 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13705823..13706412 | 18..607 | 100 | -> | Plus |
3R | 13706481..13707326 | 608..1453 | 99 | -> | Plus |
3R | 13707397..13707906 | 1454..1963 | 100 | Plus | |
3R | 13705748..13705764 | 1..17 | 100 | -> | Plus |
Translation from 1 to 1889
> GH13824.hyp PLLSIDEVASVMSASNKGGYKTPRKENLMSIENLTNSEEESEDLNTAMVG NAVESQPKVTSRRSTRRPSPTKKYQAYQKESNGKGQEERIVVNYVEMSDE RSSDAEDQEEEESIEESENAARPAAKDLHLIQSEYNVAGTSMFGFNTPKK RDAMALAALNATPCTPKTPKTPRLGVKTPDTKRKKSMDQPKTPAHVRTRV KKQIAKIVADSDEDFSGDESDFRPSDEESSSSSSSSDAGNSSDNDAADDE PKTPSRARRAIVVPVLPKTPSAARLRQSARAKKSNEFVPESDGYFHSHAS SKILTSDHTLDRLKNPRLAADRVFSLLSEIKTSAEHEGSINAIMEEYRSY FPKWMCILNEGFNILLYGLGSKHQLLQSFHREVLHKQTVLVVNGFFPSLT IKDMLDSITSDILDAGISPANPHEAVDMIEEEFALIPETHLFLIVHNLDG AMLRNVKAQAILSRLARIPNIHLLASIDHINTPLLWDQGKLCSFNFSWWD CTTMLPYTNETAFENSLLVQNSGELALSSMRSVFSSLTTNSRGIYMLIVK YQLKNKGNATYQGMPFRDLYSSCREAFLVSSDLALRAQLTEFLDHKLVKS KRSVDGSEQLTIPIDGALLQQFLEEQEKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Orc2-PA | 618 | CG3041-PA | 1..618 | 12..629 | 3150 | 100 | Plus |
Translation from 33 to 1889
> GH13824.pep MSASNKGGYKTPRKENLMSIENLTNSEEESEDLNTAMVGNAVESQPKVTS RRSTRRPSPTKKYQAYQKESNGKGQEERIVVNYVEMSDERSSDAEDQEEE ESIEESENAARPAAKDLHLIQSEYNVAGTSMFGFNTPKKRDAMALAALNA TPCTPKTPKTPRLGVKTPDTKRKKSMDQPKTPAHVRTRVKKQIAKIVADS DEDFSGDESDFRPSDEESSSSSSSSDAGNSSDNDAADDEPKTPSRARRAI VVPVLPKTPSAARLRQSARAKKSNEFVPESDGYFHSHASSKILTSDHTLD RLKNPRLAADRVFSLLSEIKTSAEHEGSINAIMEEYRSYFPKWMCILNEG FNILLYGLGSKHQLLQSFHREVLHKQTVLVVNGFFPSLTIKDMLDSITSD ILDAGISPANPHEAVDMIEEEFALIPETHLFLIVHNLDGAMLRNVKAQAI LSRLARIPNIHLLASIDHINTPLLWDQGKLCSFNFSWWDCTTMLPYTNET AFENSLLVQNSGELALSSMRSVFSSLTTNSRGIYMLIVKYQLKNKGNATY QGMPFRDLYSSCREAFLVSSDLALRAQLTEFLDHKLVKSKRSVDGSEQLT IPIDGALLQQFLEEQEKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16229-PA | 620 | GF16229-PA | 1..620 | 1..618 | 2692 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16829-PA | 618 | GG16829-PA | 1..618 | 1..618 | 2870 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22255-PA | 571 | GH22255-PA | 20..570 | 50..618 | 2371 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Orc2-PA | 618 | CG3041-PA | 1..618 | 1..618 | 3150 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21981-PA | 604 | GI21981-PA | 13..604 | 7..618 | 2330 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24230-PA | 630 | GL24230-PA | 1..630 | 1..618 | 2538 | 82 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15825-PA | 630 | GA15825-PA | 1..630 | 1..618 | 2532 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24145-PA | 618 | GM24145-PA | 1..618 | 1..618 | 3221 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18940-PA | 618 | GD18940-PA | 1..618 | 1..618 | 3233 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14342-PA | 622 | GJ14342-PA | 10..622 | 1..618 | 2569 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22682-PA | 638 | GK22682-PA | 13..638 | 3..618 | 2442 | 76.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24212-PA | 618 | GE24212-PA | 1..618 | 1..618 | 3047 | 95.1 | Plus |