BDGP Sequence Production Resources |
Search the DGRC for GH13851
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 138 |
Well: | 51 |
Vector: | pOT2 |
Associated Gene/Transcript | Odc1-RA |
Protein status: | GH13851.pep: gold |
Preliminary Size: | 1274 |
Sequenced Size: | 1300 |
Gene | Date | Evidence |
---|---|---|
CG8721 | 2001-01-01 | Release 2 assignment |
CG8721 | 2002-03-19 | Blastp of sequenced clone |
CG8721 | 2003-01-01 | Sim4 clustering to Release 3 |
Odc1 | 2008-04-29 | Release 5.5 accounting |
Odc1 | 2008-08-15 | Release 5.9 accounting |
Odc1 | 2008-12-18 | 5.12 accounting |
1300 bp (1300 high quality bases) assembled on 2002-03-19
GenBank Submission: AY094710
> GH13851.complete CCGCGTCTCGAGCGCCCCACTCACTCACTCAGTTGAGATCTTTCCGAGAT GGCGGCCGCTACCCCTGAAATCCAGTTCTACGAACGCGAGCTCAACATCC GCCGGGTGATCGAGGAGTGCGACCTGCAGCGCCTGGACCAGGCCCTCAAC ATCTGCGACCTGTCTAGCGTGGAGCGTAAGCTGCGCCTCTGGCAGAAGCT CCTGCCCAGGATCAAGCCCTTCTACGCCGTCAAGTGCAATGACGATCCAA TGGTGGTCAGGCTGCTGGCCCAGCTGGGAGCCGGATTCGACTGCGCCTCC AAAAACGAAGTCAAGCTGGTCTTGGGCTTCGATGTCTCGCCGGAGCGTAT CATCTTCGCCAATCCCTGCCGCCCTGTCAGCCATCTGGAGTACGCCAAGG AGCACCAGGTGTCCAACGGAACGGTGGACAATGAGTTCGAGGTATACAAG CTGCACACGCACTATCCCAACTCCAACCTGATCGTGAGATTCAAGAGCGA GGCCAAGGAGGCACAGTGCCCACTGGGCGACAAATTTGGCTGTGATGCGG ATGTGGATGCAGCGGCCCTAATGCTGCTGGCCAAATCCTTGGAGCTGAAG GTGACCGGCACCAGTTTCCACGTCGGCTCCGGATGCAGCGAGCTGCAGGC CTACGATCGGGCCATCAAGAAGGCCAAGAACCTCTTCAAGTTCGGCGCAC TACTGGGCTATGACATGGACTTTCTGGACATTGGCGGTGGGTTCCCTGGC AGCGATGACGTAAAGTTTGAGAAGATAGCCGAAAGTGTGAATACCTCGGT GCAGCGTCATTTTCCCGACGAACGCGTTCACATAATCGCCGAACCAGGAC GCTTCTTTGTGGCGGCAGCCTGCACCTTGGTTTGCAAGATCCACGCCAAG CGGGAGATCAGGAACGAAGCTGGCAAACTGGACACCGTAATGTACTATCT GAATGACGGCGTCTATGGGTCCTTCAACTGCATTCTGTACGACCATCAAG TGGTGATTGCAGAGCATTATCTGGACAATGCAGAATCTTTGCCACACCTA AAGTCCTTGATTTGGGGGCCAAGTTGTGACGCCCTAGATAAGATTTCGGA GGACCTGCACTTGCCCAACCTAAACCGAGGCGATCTTTTGGGATTCCGAA ACATGGGCGCCTACACCATGCCCATTGCCAGTGCATTCAATGGATTCGAA GTCCCCAAGACCCTGTACTTCCAAGCTATATGACTAAATCACTTACTCAA TCCAATAAAACCAACATTTTGTGGAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Odc1-RA | 1413 | Odc1-RA | 104..1378 | 1..1275 | 6375 | 100 | Plus |
Odc2-RA | 1313 | Odc2-RA | 101..710 | 88..697 | 1295 | 80.8 | Plus |
Odc2.a | 1231 | Odc2.a | 40..428 | 88..476 | 775 | 79.9 | Plus |
Odc2.a | 1231 | Odc2.a | 430..628 | 499..697 | 470 | 82.4 | Plus |
Odc2-RA | 1313 | Odc2-RA | 852..969 | 839..956 | 245 | 80.5 | Plus |
Odc2-RA | 1313 | Odc2-RA | 1052..1222 | 1039..1212 | 245 | 77 | Plus |
Odc2.a | 1231 | Odc2.a | 770..887 | 839..956 | 245 | 80.5 | Plus |
Odc2.a | 1231 | Odc2.a | 970..1140 | 1039..1212 | 245 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 3892223..3892542 | 1..320 | 1570 | 99.4 | Plus |
chr2R | 21145070 | chr2R | 3893044..3893346 | 472..774 | 1500 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 3893402..3893653 | 773..1024 | 1260 | 100 | Plus |
chr2R | 21145070 | chr2R | 3893909..3894092 | 1091..1274 | 920 | 100 | Plus |
chr2R | 21145070 | chr2R | 3892835..3892993 | 318..476 | 795 | 100 | Plus |
chr2R | 21145070 | chr2R | 3895412..3895637 | 472..697 | 530 | 82.3 | Plus |
chr2R | 21145070 | chr2R | 3894722..3894954 | 88..320 | 520 | 81.5 | Plus |
chr2R | 21145070 | chr2R | 3893782..3893851 | 1023..1092 | 350 | 100 | Plus |
chr2R | 21145070 | chr2R | 3895225..3895364 | 337..476 | 280 | 80 | Plus |
chr2R | 21145070 | chr2R | 3895837..3895954 | 839..956 | 245 | 80.5 | Plus |
chr2R | 21145070 | chr2R | 3896281..3896392 | 1101..1212 | 230 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 8004803..8005122 | 1..320 | 1600 | 100 | Plus |
2R | 25286936 | 2R | 8005624..8005926 | 472..774 | 1500 | 99.7 | Plus |
2R | 25286936 | 2R | 8005982..8006233 | 773..1024 | 1260 | 100 | Plus |
2R | 25286936 | 2R | 8006489..8006673 | 1091..1275 | 925 | 100 | Plus |
2R | 25286936 | 2R | 8005415..8005573 | 318..476 | 795 | 100 | Plus |
2R | 25286936 | 2R | 8007993..8008218 | 472..697 | 530 | 82.3 | Plus |
2R | 25286936 | 2R | 8007303..8007535 | 88..320 | 520 | 81.5 | Plus |
2R | 25286936 | 2R | 8006362..8006431 | 1023..1092 | 350 | 100 | Plus |
2R | 25286936 | 2R | 8007806..8007945 | 337..476 | 280 | 80 | Plus |
2R | 25286936 | 2R | 8008418..8008535 | 839..956 | 245 | 80.5 | Plus |
2R | 25286936 | 2R | 8008862..8008973 | 1101..1212 | 215 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 8006002..8006321 | 1..320 | 1600 | 100 | Plus |
2R | 25260384 | 2R | 8006823..8007125 | 472..774 | 1500 | 99.6 | Plus |
2R | 25260384 | 2R | 8007181..8007432 | 773..1024 | 1260 | 100 | Plus |
2R | 25260384 | 2R | 8007688..8007872 | 1091..1275 | 925 | 100 | Plus |
2R | 25260384 | 2R | 8006614..8006772 | 318..476 | 795 | 100 | Plus |
2R | 25260384 | 2R | 8009192..8009417 | 472..697 | 530 | 82.3 | Plus |
2R | 25260384 | 2R | 8008502..8008734 | 88..320 | 520 | 81.5 | Plus |
2R | 25260384 | 2R | 8007561..8007630 | 1023..1092 | 350 | 100 | Plus |
2R | 25260384 | 2R | 8009005..8009144 | 337..476 | 280 | 80 | Plus |
2R | 25260384 | 2R | 8009617..8009734 | 839..956 | 245 | 80.5 | Plus |
2R | 25260384 | 2R | 8010061..8010172 | 1101..1212 | 215 | 79.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3893049..3893346 | 477..774 | 100 | -> | Plus |
chr2R | 3893404..3893652 | 775..1023 | 100 | -> | Plus |
chr2R | 3893783..3893851 | 1024..1092 | 100 | -> | Plus |
chr2R | 3892223..3892540 | 1..318 | 99 | -> | Plus |
chr2R | 3892836..3892993 | 319..476 | 100 | -> | Plus |
chr2R | 3893911..3894092 | 1093..1274 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Odc1-RA | 1..1185 | 49..1233 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Odc1-RA | 1..1185 | 49..1233 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Odc1-RA | 1..1185 | 49..1233 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Odc1-RA | 1..1185 | 49..1233 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Odc1-RA | 1..1185 | 49..1233 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Odc1-RA | 1..1274 | 1..1274 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Odc1-RA | 1..1274 | 1..1274 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Odc1-RA | 1..1253 | 22..1274 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Odc1-RA | 1..1274 | 1..1274 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Odc1-RA | 1..1253 | 22..1274 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8004803..8005120 | 1..318 | 100 | -> | Plus |
2R | 8005416..8005573 | 319..476 | 100 | -> | Plus |
2R | 8005629..8005926 | 477..774 | 100 | -> | Plus |
2R | 8005984..8006232 | 775..1023 | 100 | -> | Plus |
2R | 8006363..8006431 | 1024..1092 | 100 | -> | Plus |
2R | 8006491..8006672 | 1093..1274 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8004803..8005120 | 1..318 | 100 | -> | Plus |
2R | 8005416..8005573 | 319..476 | 100 | -> | Plus |
2R | 8005629..8005926 | 477..774 | 100 | -> | Plus |
2R | 8005984..8006232 | 775..1023 | 100 | -> | Plus |
2R | 8006363..8006431 | 1024..1092 | 100 | -> | Plus |
2R | 8006491..8006672 | 1093..1274 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8004803..8005120 | 1..318 | 100 | -> | Plus |
2R | 8005416..8005573 | 319..476 | 100 | -> | Plus |
2R | 8005629..8005926 | 477..774 | 100 | -> | Plus |
2R | 8005984..8006232 | 775..1023 | 100 | -> | Plus |
2R | 8006363..8006431 | 1024..1092 | 100 | -> | Plus |
2R | 8006491..8006672 | 1093..1274 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3893996..3894177 | 1093..1274 | 100 | Plus | |
arm_2R | 3893134..3893431 | 477..774 | 100 | -> | Plus |
arm_2R | 3893489..3893737 | 775..1023 | 100 | -> | Plus |
arm_2R | 3893868..3893936 | 1024..1092 | 100 | -> | Plus |
arm_2R | 3892308..3892625 | 1..318 | 100 | -> | Plus |
arm_2R | 3892921..3893078 | 319..476 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8006828..8007125 | 477..774 | 100 | -> | Plus |
2R | 8007183..8007431 | 775..1023 | 100 | -> | Plus |
2R | 8007562..8007630 | 1024..1092 | 100 | -> | Plus |
2R | 8007690..8007871 | 1093..1274 | 100 | Plus | |
2R | 8006002..8006319 | 1..318 | 100 | -> | Plus |
2R | 8006615..8006772 | 319..476 | 100 | -> | Plus |
Translation from 48 to 1232
> GH13851.pep MAAATPEIQFYERELNIRRVIEECDLQRLDQALNICDLSSVERKLRLWQK LLPRIKPFYAVKCNDDPMVVRLLAQLGAGFDCASKNEVKLVLGFDVSPER IIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPNSNLIVRFKS EAKEAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELQ AYDRAIKKAKNLFKFGALLGYDMDFLDIGGGFPGSDDVKFEKIAESVNTS VQRHFPDERVHIIAEPGRFFVAAACTLVCKIHAKREIRNEAGKLDTVMYY LNDGVYGSFNCILYDHQVVIAEHYLDNAESLPHLKSLIWGPSCDALDKIS EDLHLPNLNRGDLLGFRNMGAYTMPIASAFNGFEVPKTLYFQAI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13654-PA | 396 | GF13654-PA | 1..394 | 1..394 | 1843 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23323-PA | 396 | GG23323-PA | 1..396 | 1..394 | 2010 | 94.7 | Plus |
Dere\GG23324-PA | 399 | GG23324-PA | 1..392 | 1..392 | 1484 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21896-PA | 392 | GH21896-PA | 3..391 | 5..393 | 1655 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Odc1-PA | 394 | CG8721-PA | 1..394 | 1..394 | 2073 | 100 | Plus |
Odc2-PA | 393 | CG8719-PA | 8..392 | 8..393 | 1545 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20395-PA | 392 | GI20395-PA | 3..392 | 5..394 | 1591 | 77.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11482-PA | 395 | GL11482-PA | 1..395 | 1..394 | 1803 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21280-PA | 395 | GA21280-PA | 1..395 | 1..394 | 1808 | 83.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11484-PA | 114 | GM11484-PA | 1..91 | 1..91 | 365 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15360-PA | 394 | GD15360-PA | 1..394 | 1..394 | 2072 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22122-PA | 392 | GJ22122-PA | 6..392 | 8..394 | 1704 | 80.6 | Plus |
Translation from 48 to 1232
> GH13851.hyp MAAATPEIQFYERELNIRRVIEECDLQRLDQALNICDLSSVERKLRLWQK LLPRIKPFYAVKCNDDPMVVRLLAQLGAGFDCASKNEVKLVLGFDVSPER IIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPNSNLIVRFKS EAKEAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELQ AYDRAIKKAKNLFKFGALLGYDMDFLDIGGGFPGSDDVKFEKIAESVNTS VQRHFPDERVHIIAEPGRFFVAAACTLVCKIHAKREIRNEAGKLDTVMYY LNDGVYGSFNCILYDHQVVIAEHYLDNAESLPHLKSLIWGPSCDALDKIS EDLHLPNLNRGDLLGFRNMGAYTMPIASAFNGFEVPKTLYFQAI*