Clone GH13914 Report

Search the DGRC for GH13914

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:139
Well:14
Vector:pOT2
Associated Gene/TranscriptCG7251-RA
Protein status:GH13914.pep: gold
Preliminary Size:1200
Sequenced Size:1216

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7251 2001-01-01 Release 2 assignment
CG7251 2001-09-19 Blastp of sequenced clone
CG7251 2003-01-01 Sim4 clustering to Release 3
CG7251 2008-04-29 Release 5.5 accounting
CG7251 2008-08-15 Release 5.9 accounting
CG7251 2008-12-18 5.12 accounting

Clone Sequence Records

GH13914.complete Sequence

1216 bp (1216 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058371

> GH13914.complete
GACAATCGGTTTGAAAAAAAGAAAAGCCAAAAAATTATTTCGTTTAACAG
TGTCTATACAGCTTCCTCGTTCATACGCGTTCCTCTAAAAATAAAAAGGT
TAAGAGAATGGCATTTTGCGGCCACGTTACTTCCTCTGGACAAATAGTCC
TGCGGGATGAGATCTTCAGCAGCAGGACTTGTATTGCGCGCTCCCCGTCA
TCCGGAGGCTCACTAAACTCCATGTCTTCGCCGAGCTCGCTCGCCCAGAA
CACCACACGCACATACTTCTTCAAGGACGACGGTGGAAATCCTTCGCCCC
AATCTACGGACAACTGGTCGCTCGGCGGACTCAAGCGATCGGAGATCCAG
AGCAACTTGGTGCCCTCGCTGTGTCTCAGCTCGCAGGAAAGCTCCCTCAA
CTATCTCAGCCACTGCAAGGGAATTAAGGTGGACCGCCAACCAGAGGCCG
CCTATCAGAACTGGTACTCAGCCAAGCAGCAGCAATTACTAGAGAAGCAG
CGGCGAATCAAGGAGGAGCAGGAGTTCAAGCAGCAGCGGACGGAGGAGCG
CAAGCAGCTGGCCAGGATGTGCTACGAGCAGTGGCTAAAGGACAAGGCCC
GCCAGGCGGCAAACTTGCAGCTGGAGAGCCACATCCAAGACGCGGCCATG
AAGGCCAGCATAGCTCTGCGCAAGAATCCGTTGGAGTCACTGCGCAAGAA
TCCCGTCGTATCGTCCTTATCCGGACTGGGATCGCTGGGATCCGGGCCGA
GCTCATCGACGGCACCCAGACGCATTCGCAAGGTGTCCAAGGACGAGATT
CGCAGGGTCGTTGAGGACTGGTGGCTAAAAAAGCAGAGTCAGCAGCAGGC
GCAGCGCGAGGAGAAGCGACGCGCCATGTTGTCCAAGGCCTTGAAAGAGG
AACAGCGCCGGCAACTGGCCCAGGATGCCTGGTCGAAGTGGATGAGCAAT
GTGGACGCCAAGCCCAAGCCGGTGCCCCTCAATCAGGGCATGGACTCACT
GCGAGGCACCATATCTCAACTCTATGTGAATCCCACTCCATGGATGGGTC
CAGTTAAACAGACGCAAATGTAGTCCTCTCCGTTCAGATTTAAGATGTCA
AAGCAAAACTTTTTTGGCGACTCCAAATGTACAGAAATTATTTAGATATA
AAAACAGTGATGTTAAAATATACACCGACAGGGTTTAGAAACTAAAAAAA
AAAAAAAAAAAAAAAA

GH13914.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:22:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG7251-RA 1278 CG7251-RA 63..1259 1..1197 5970 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:46:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 5586247..5587013 1193..427 3835 100 Minus
chr2L 23010047 chr2L 5587067..5587496 430..1 2135 99.8 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:50:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:45:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5587145..5587915 1197..427 3855 100 Minus
2L 23513712 2L 5587969..5588398 430..1 2135 99.8 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:45:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5587145..5587915 1197..427 3855 100 Minus
2L 23513712 2L 5587969..5588398 430..1 2135 99.7 Minus
Blast to na_te.dros performed 2019-03-16 05:45:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6803..6937 469..605 139 58.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6735..6818 475..558 123 60.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6777..6860 475..558 123 60.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6756..6818 475..537 117 65.1 Plus
G-element 4346 G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). 374..540 517..680 116 59 Plus
Dvir\Uvir 6564 Dvir\Uvir VIRUVIR 6564bp 4505..4573 473..541 111 62.3 Plus

GH13914.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:46:43 Download gff for GH13914.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 5586247..5587011 429..1193 100 <- Minus
chr2L 5587069..5587496 1..428 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:41:08 Download gff for GH13914.complete
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 1..966 108..1073 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:07:34 Download gff for GH13914.complete
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 1..966 108..1073 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:37:50 Download gff for GH13914.complete
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 1..966 108..1073 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:38:20 Download gff for GH13914.complete
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 1..966 108..1073 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:07:56 Download gff for GH13914.complete
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 1..966 108..1073 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:57:41 Download gff for GH13914.complete
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 17..1209 1..1193 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:07:34 Download gff for GH13914.complete
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 17..1209 1..1193 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:37:50 Download gff for GH13914.complete
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 17..1209 1..1193 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:38:20 Download gff for GH13914.complete
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 17..1209 1..1193 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:07:56 Download gff for GH13914.complete
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 17..1209 1..1193 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:46:43 Download gff for GH13914.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5587149..5587913 429..1193 100 <- Minus
2L 5587971..5588398 1..428 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:46:43 Download gff for GH13914.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5587149..5587913 429..1193 100 <- Minus
2L 5587971..5588398 1..428 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:46:43 Download gff for GH13914.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5587149..5587913 429..1193 100 <- Minus
2L 5587971..5588398 1..428 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:37:50 Download gff for GH13914.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5587149..5587913 429..1193 100 <- Minus
arm_2L 5587971..5588398 1..428 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:15:41 Download gff for GH13914.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5587149..5587913 429..1193 100 <- Minus
2L 5587971..5588398 1..428 99   Minus

GH13914.pep Sequence

Translation from 107 to 1072

> GH13914.pep
MAFCGHVTSSGQIVLRDEIFSSRTCIARSPSSGGSLNSMSSPSSLAQNTT
RTYFFKDDGGNPSPQSTDNWSLGGLKRSEIQSNLVPSLCLSSQESSLNYL
SHCKGIKVDRQPEAAYQNWYSAKQQQLLEKQRRIKEEQEFKQQRTEERKQ
LARMCYEQWLKDKARQAANLQLESHIQDAAMKASIALRKNPLESLRKNPV
VSSLSGLGSLGSGPSSSTAPRRIRKVSKDEIRRVVEDWWLKKQSQQQAQR
EEKRRAMLSKALKEEQRRQLAQDAWSKWMSNVDAKPKPVPLNQGMDSLRG
TISQLYVNPTPWMGPVKQTQM*

GH13914.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:59:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14333-PA 314 GF14333-PA 1..311 1..317 803 56.9 Plus
Dana\GF14312-PA 300 GF14312-PA 1..291 1..319 517 44.9 Plus
Dana\GF15574-PA 508 GF15574-PA 268..499 74..316 314 35.3 Plus
Dana\GF14313-PA 396 GF14313-PA 192..395 82..313 220 29.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:59:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24293-PA 296 GG24293-PA 1..296 1..321 1160 76.4 Plus
Dere\GG25087-PA 512 GG25087-PA 247..503 46..316 254 31.9 Plus
Dere\GG24294-PA 400 GG24294-PA 196..399 82..313 239 32.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:59:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10700-PA 342 GH10700-PA 1..328 1..312 529 39.1 Plus
Dgri\GH10701-PA 394 GH10701-PA 186..392 82..319 224 31.5 Plus
Dgri\GH11037-PA 480 GH11037-PA 210..472 40..316 193 28 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG7251-PB 321 CG7251-PB 1..321 1..321 1655 100 Plus
CG7251-PA 321 CG7251-PA 1..321 1..321 1655 100 Plus
CG18266-PA 486 CG18266-PA 230..477 47..316 311 31.7 Plus
CG14011-PC 388 CG14011-PC 137..387 29..313 290 31.1 Plus
CG14011-PB 388 CG14011-PB 137..387 29..313 290 31.1 Plus
CG14011-PA 388 CG14011-PA 137..387 29..313 290 31.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:59:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11252-PA 328 GI11252-PA 1..314 1..312 582 38.8 Plus
Dmoj\GI17555-PA 515 GI17555-PA 280..507 73..316 283 34.7 Plus
Dmoj\GI11257-PA 391 GI11257-PA 191..381 85..313 252 34.6 Plus
Dmoj\GI16084-PA 1516 GI16084-PA 1117..1278 119..316 166 30.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:59:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26645-PA 622 GL26645-PA 445..621 115..313 345 37.2 Plus
Dper\GL14937-PA 521 GL14937-PA 376..520 147..313 301 37.7 Plus
Dper\GL26370-PA 477 GL26370-PA 367..472 215..320 186 37.7 Plus
Dper\GL26646-PA 362 GL26646-PA 315..361 267..313 162 59.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:59:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA29002-PA 611 GA29002-PA 434..610 115..313 339 37.2 Plus
Dpse\GA22206-PA 510 GA22206-PA 333..509 115..313 324 35.7 Plus
Dpse\GA12696-PA 362 GA12696-PA 153..361 78..313 201 30.2 Plus
Dpse\GA14863-PA 477 GA14863-PA 367..472 215..320 186 37.7 Plus
Dpse\GA22692-PA 564 GA22692-PA 262..454 115..312 170 29.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:59:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18010-PA 322 GM18010-PA 1..322 1..321 1453 94.4 Plus
Dsec\GM18011-PA 385 GM18011-PA 191..384 82..313 251 32.9 Plus
Dsec\GM18563-PA 477 GM18563-PA 224..468 40..316 208 26.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:59:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22643-PA 321 GD22643-PA 1..321 1..321 1469 94.4 Plus
Dsim\GD23354-PA 485 GD23354-PA 224..476 40..316 209 27.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:59:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12367-PA 342 GJ12367-PA 1..332 1..312 580 41.1 Plus
Dvir\GJ15552-PA 537 GJ15552-PA 269..529 46..316 290 35.7 Plus
Dvir\GJ12378-PA 403 GJ12378-PA 191..396 85..314 237 33.8 Plus
Dvir\GJ15731-PA 962 GJ15731-PA 523..684 112..312 173 28.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:59:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15429-PA 332 GK15429-PA 1..324 1..316 652 43.6 Plus
Dwil\GK14687-PA 499 GK14687-PA 243..492 49..317 287 33 Plus
Dwil\GK14686-PA 385 GK14686-PA 186..385 78..314 255 31.8 Plus
Dwil\GK18131-PA 512 GK18131-PA 47..206 124..317 197 34 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:59:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18989-PA 317 GE18989-PA 1..317 1..321 1187 80.4 Plus
Dyak\GE18990-PA 386 GE18990-PA 192..385 82..313 258 31.6 Plus
Dyak\GE25537-PA 508 GE25537-PA 239..499 41..316 243 31.9 Plus

GH13914.hyp Sequence

Translation from 107 to 1072

> GH13914.hyp
MAFCGHVTSSGQIVLRDEIFSSRTCIARSPSSGGSLNSMSSPSSLAQNTT
RTYFFKDDGGNPSPQSTDNWSLGGLKRSEIQSNLVPSLCLSSQESSLNYL
SHCKGIKVDRQPEAAYQNWYSAKQQQLLEKQRRIKEEQEFKQQRTEERKQ
LARMCYEQWLKDKARQAANLQLESHIQDAAMKASIALRKNPLESLRKNPV
VSSLSGLGSLGSGPSSSTAPRRIRKVSKDEIRRVVEDWWLKKQSQQQAQR
EEKRRAMLSKALKEEQRRQLAQDAWSKWMSNVDAKPKPVPLNQGMDSLRG
TISQLYVNPTPWMGPVKQTQM*

GH13914.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:46:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG7251-PB 321 CG7251-PB 1..321 1..321 1655 100 Plus
CG7251-PA 321 CG7251-PA 1..321 1..321 1655 100 Plus
CG18266-PA 486 CG18266-PA 230..477 47..316 311 31.7 Plus
CG14011-PC 388 CG14011-PC 137..387 29..313 290 31.1 Plus
CG14011-PB 388 CG14011-PB 137..387 29..313 290 31.1 Plus