BDGP Sequence Production Resources |
Search the DGRC for GH13924
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 139 |
Well: | 24 |
Vector: | pOT2 |
Associated Gene/Transcript | CG2046-RA |
Protein status: | GH13924.pep: gold |
Preliminary Size: | 761 |
Sequenced Size: | 854 |
Gene | Date | Evidence |
---|---|---|
CG2046 | 2001-01-01 | Release 2 assignment |
CG2046 | 2002-03-19 | Blastp of sequenced clone |
CG2046 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2046 | 2008-04-29 | Release 5.5 accounting |
CG2046 | 2008-08-15 | Release 5.9 accounting |
CG2046 | 2008-12-18 | 5.12 accounting |
854 bp (854 high quality bases) assembled on 2002-03-19
GenBank Submission: AY094711
> GH13924.complete ATTAGTTTCACCTTTTTTATTAAATCAAAACAGACACGATGAGCTGTCCA GGATTTGGAGAACTAAATATACCCTCGTCGCGTGCCTTCTGGGACGACTG CGACGAGGATGAATTGGAGAACCTTAAGCCGGTGGAGAAGCTGCAGCTGA AGTTTGATGATGATTGCGATGGGGAAGCTGCCCCTGTGGAGAGCGAGATG CTGGTGGTCATTGAGGGCGTCAACGTCACTCACTTCGCCTCTTCTCTGCT GGAAAAGGATGCAAAGCGTGTGTGCGCCATTCCTGCCAATAACTCGACCC TGCACTGGAGTCATTCGTCCAAACAGTTGCTGGCCATAATCAACGAGGAC CTGACCAGTAGCGGCGAGGTAGCGGAGCTCCTACTGCCGTACGTGAAGCT TGCCAAGAAAGTGATCACTCTGACGCTTAAGCCAAAGGTCGAGTTCAAAA GCGAGGACATCCAGCTCTACCGGGATCACATTGCCGTTGTCCGCGGCATA GGTGCCAACCAGAAGGATATCACTGAACTAGAGGCTCCCAACTTTATCGC TGGAGTTGCAGCAGGCGTTGCCAGTTGGCGGGATCAGATGGAATTGCCTG TTACCTCTTTCGTTATTTACACCGACAAGCTGCCCCTCGACGCCACAGCT GCGCAGCCAGTGATCAAGGTACTTAAAGCCGCGGGCGTTGCCTGCAGCTC GAGCTACATCCCTCCGCGGAAGGAGAGCTCTTATTTGTACATGTGAAACT ACTTTTGGCTGTGCTCAACTTCCTAGTTTTAATGCTTGTAAAAATGATAC GGTTGCGGAATAAAAATCGAACTACTTAAGTACATCAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1619288..1619715 | 567..140 | 2140 | 100 | Minus |
chr3R | 27901430 | chr3R | 1618955..1619224 | 836..567 | 1350 | 100 | Minus |
chr3R | 27901430 | chr3R | 1619768..1619907 | 140..1 | 700 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsil\Loa | 7779 | Dsil\Loa DSV28T24 7779bp AKA(S39346) Derived from X60177 (Rel. 37, Last updated, Version 8). | 1743..1806 | 275..336 | 116 | 68.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1618955..1619223 | 568..836 | 100 | <- | Minus |
chr3R | 1619288..1619715 | 140..567 | 100 | <- | Minus |
chr3R | 1619769..1619907 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2046-RA | 1..708 | 39..746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2046-RA | 1..708 | 39..746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2046-RA | 1..708 | 39..746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2046-RA | 1..708 | 39..746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2046-RA | 1..708 | 39..746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2046-RA | 72..907 | 1..836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2046-RA | 72..907 | 1..836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2046-RA | 58..893 | 1..836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2046-RA | 72..907 | 1..836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2046-RA | 58..893 | 1..836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5793308..5793576 | 568..836 | 100 | <- | Minus |
3R | 5793641..5794068 | 140..567 | 100 | <- | Minus |
3R | 5794122..5794260 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5793308..5793576 | 568..836 | 100 | <- | Minus |
3R | 5793641..5794068 | 140..567 | 100 | <- | Minus |
3R | 5794122..5794260 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5793308..5793576 | 568..836 | 100 | <- | Minus |
3R | 5793641..5794068 | 140..567 | 100 | <- | Minus |
3R | 5794122..5794260 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1619030..1619298 | 568..836 | 100 | <- | Minus |
arm_3R | 1619363..1619790 | 140..567 | 100 | <- | Minus |
arm_3R | 1619844..1619982 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5534139..5534407 | 568..836 | 100 | <- | Minus |
3R | 5534472..5534899 | 140..567 | 100 | <- | Minus |
3R | 5534953..5535091 | 1..139 | 100 | Minus |
Translation from 38 to 745
> GH13924.pep MSCPGFGELNIPSSRAFWDDCDEDELENLKPVEKLQLKFDDDCDGEAAPV ESEMLVVIEGVNVTHFASSLLEKDAKRVCAIPANNSTLHWSHSSKQLLAI INEDLTSSGEVAELLLPYVKLAKKVITLTLKPKVEFKSEDIQLYRDHIAV VRGIGANQKDITELEAPNFIAGVAAGVASWRDQMELPVTSFVIYTDKLPL DATAAQPVIKVLKAAGVACSSSYIPPRKESSYLYM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18645-PA | 235 | GF18645-PA | 1..235 | 1..235 | 950 | 72.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10821-PA | 235 | GG10821-PA | 1..235 | 1..235 | 1142 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19435-PA | 235 | GH19435-PA | 1..235 | 1..235 | 737 | 58.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2046-PA | 235 | CG2046-PA | 1..235 | 1..235 | 1202 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22638-PA | 235 | GI22638-PA | 1..235 | 1..235 | 789 | 62 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23009-PA | 52 | GL23009-PA | 1..42 | 1..42 | 192 | 78.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15203-PA | 235 | GA15203-PA | 1..235 | 1..235 | 910 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10589-PA | 235 | GM10589-PA | 1..235 | 1..235 | 1210 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19580-PA | 235 | GD19580-PA | 1..235 | 1..235 | 1210 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23885-PA | 235 | GJ23885-PA | 1..235 | 1..235 | 780 | 59.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13860-PA | 233 | GK13860-PA | 1..233 | 1..235 | 844 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24135-PA | 235 | GE24135-PA | 1..235 | 1..235 | 1114 | 88.5 | Plus |
Translation from 38 to 745
> GH13924.hyp MSCPGFGELNIPSSRAFWDDCDEDELENLKPVEKLQLKFDDDCDGEAAPV ESEMLVVIEGVNVTHFASSLLEKDAKRVCAIPANNSTLHWSHSSKQLLAI INEDLTSSGEVAELLLPYVKLAKKVITLTLKPKVEFKSEDIQLYRDHIAV VRGIGANQKDITELEAPNFIAGVAAGVASWRDQMELPVTSFVIYTDKLPL DATAAQPVIKVLKAAGVACSSSYIPPRKESSYLYM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2046-PA | 235 | CG2046-PA | 1..235 | 1..235 | 1202 | 100 | Plus |