BDGP Sequence Production Resources |
Search the DGRC for GH14043
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 140 |
Well: | 43 |
Vector: | pOT2 |
Associated Gene/Transcript | Rca1-RA |
Protein status: | GH14043.pep: gold |
Preliminary Size: | 1551 |
Sequenced Size: | 1543 |
Gene | Date | Evidence |
---|---|---|
CG10800 | 2001-01-01 | Release 2 assignment |
CG10800 | 2001-09-19 | Blastp of sequenced clone |
CG10800 | 2003-01-01 | Sim4 clustering to Release 3 |
Rca1 | 2008-04-29 | Release 5.5 accounting |
Rca1 | 2008-08-15 | Release 5.9 accounting |
Rca1 | 2008-12-18 | 5.12 accounting |
1543 bp (1543 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058372
> GH14043.complete GGCGGTCACACTGATCCGTACCCAAAAACAATCAACCGATGCGAAAAGCA TAACAATTCGAAAGTTTAAAATTCGGTCAAGATGAGCGCCTATTATCGGC GCGCGGCGTTGCGGAAGAAGAGCCCAAGCCGAGGGTCATCCTTCGAGTTG GAGATGAACGAGTCTGGCTACACATCCTTCCTGGCGCTGCACAATTCCAC CGCGGAGACGCCATTTTTATTGGAGGACGCTGAGGGCGAAAACTGTCGCA ATGCATCGAATACCACAACATTCTTTCGGGGGCTGAACACGCCCAGTGGC CACCAGGAGCAGGACCTTTACTGGGGCAAGCCCTATCCCAGAACACAGCC CCAAAAGAAATTTTCCGCGGAGGAGGAGCCTTTCTCTATGACTCCGCGTC TGCAGGATGAGCATAGTCTGCCCAAGCGACGCAAGAAACACTTTCAATCG CCACACAGTAGCCCCAAGAAGTCCAAAAAGCTGCTCTTTCCCCACATAGA AGAACCGCCCAAGAATCGCTTCTACGGCGGTGTCGAAAAGCTGGATATCG TGGCCAAGCTGGCGCAATGGCAACCGGCACTGCAGTGCATACTGCGTCAT GTGGGCGCCCACACGCTGGACGTGATGACCAAGGTATCGCCGGCCTGGAA GCAGGCTGTTTATCGCAGCCAACGCGACTTGGAGCGCCTACAGAACCACC GACTCAAATTGAATCTAACCAAAGAGAATCCTCACGTGCCCAAGCGGTGC AGCCATGTGCCCAAGGCAAACCACACAGTGCCATTGCAGACCTCGAACCA TAGCAGCCTGGCCAACAGCGCCGCCTCGCTAATGGACTCGGGCAACTCGA GCATCCACCTGATGGACGTGGATGCCGGAAGGGTGCTGCGCGAGCAGACG CAGCGCGTCAAGTGTCCGCGATGCGGTCGAGGCAGCCGGGTTTTCATAAG CGAGGCGGCCAAGTGTGGCGAAAACCTATTGTCGCAAACTCTGCCTATTG GACGTACAACCAGCACATTCCCCTGCATGACGGGTCCGCCTCTCAAACGC TTCCTGTCCCTGGATCTTGACGAGGTCAGGACTTCACCGCAAGGACCGCC ATATAACTTCGCCGAATGCACCAGTGTCATCTGCCAGTTTCGGTTCTGCG TCAACTGTCTGTGCAAGTCGCATCCCGGCGAGCGTTGCCTGGTCACCGAA CTGGACACACCATCCAAACTGATGATGCCACGGGAGCGACTGACGCCGCC ACAACGTGCCCAGAACCGTGATCCGAAAATCACAAGGAAGAACTCGCTCA AGCGGCTCTGCTTTTAGCTTTATCATAGGCTTTTAACTATTACGATTAGT ATTCGATTTTTTTAAATCTCATTAATTTCGTATTATGTCCATCGCATTAA GTTCCATTTCATCACGTACATTCATATATATGTTTTTAAATCGTTCCATG TAAGGTTTGTCGGAATTCTGTACCTCTGCGAGATTAAGTATTTTTTACAC ATGCAAAATATATAAATCATTTTTAGAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rca1-RA | 1553 | Rca1-RA | 18..1545 | 1..1528 | 7640 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 6851422..6852947 | 1..1526 | 7615 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6852341..6853868 | 1..1528 | 7640 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6852341..6853868 | 1..1528 | 7640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6851422..6852947 | 1..1526 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rca1-RA | 1..1236 | 82..1317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rca1-RA | 1..1236 | 82..1317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rca1-RA | 1..1236 | 82..1317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rca1-RA | 1..1236 | 82..1317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rca1-RA | 1..1236 | 82..1317 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rca1-RA | 18..1543 | 1..1526 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rca1-RA | 18..1543 | 1..1526 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rca1-RA | 27..1552 | 1..1526 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rca1-RA | 18..1543 | 1..1526 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rca1-RA | 27..1552 | 1..1526 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6852341..6853866 | 1..1526 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6852341..6853866 | 1..1526 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6852341..6853866 | 1..1526 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6852341..6853866 | 1..1526 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6852341..6853866 | 1..1526 | 100 | Plus |
Translation from 81 to 1316
> GH14043.pep MSAYYRRAALRKKSPSRGSSFELEMNESGYTSFLALHNSTAETPFLLEDA EGENCRNASNTTTFFRGLNTPSGHQEQDLYWGKPYPRTQPQKKFSAEEEP FSMTPRLQDEHSLPKRRKKHFQSPHSSPKKSKKLLFPHIEEPPKNRFYGG VEKLDIVAKLAQWQPALQCILRHVGAHTLDVMTKVSPAWKQAVYRSQRDL ERLQNHRLKLNLTKENPHVPKRCSHVPKANHTVPLQTSNHSSLANSAASL MDSGNSSIHLMDVDAGRVLREQTQRVKCPRCGRGSRVFISEAAKCGENLL SQTLPIGRTTSTFPCMTGPPLKRFLSLDLDEVRTSPQGPPYNFAECTSVI CQFRFCVNCLCKSHPGERCLVTELDTPSKLMMPRERLTPPQRAQNRDPKI TRKNSLKRLCF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15431-PA | 339 | GF15431-PA | 74..339 | 143..411 | 1032 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10438-PA | 411 | GG10438-PA | 1..411 | 1..411 | 2024 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13716-PA | 416 | GH13716-PA | 1..416 | 1..411 | 708 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rca1-PA | 411 | CG10800-PA | 1..411 | 1..411 | 2198 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23995-PA | 438 | GI23995-PA | 1..438 | 1..411 | 691 | 45.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26189-PA | 416 | GL26189-PA | 1..416 | 1..411 | 1254 | 61.2 | Plus |
Dper\GL23201-PA | 318 | GL23201-PA | 2..317 | 10..379 | 596 | 41.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10566-PA | 416 | GA10566-PA | 1..416 | 1..411 | 1241 | 60.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16226-PA | 409 | GM16226-PA | 1..409 | 1..411 | 2085 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23434-PA | 411 | GD23434-PA | 1..411 | 1..411 | 2116 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21279-PA | 448 | GJ21279-PA | 1..448 | 1..411 | 777 | 45.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24784-PA | 441 | GK24784-PA | 1..441 | 1..411 | 849 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14154-PA | 412 | GE14154-PA | 1..412 | 1..411 | 2030 | 92.2 | Plus |
Translation from 81 to 1316
> GH14043.hyp MSAYYRRAALRKKSPSRGSSFELEMNESGYTSFLALHNSTAETPFLLEDA EGENCRNASNTTTFFRGLNTPSGHQEQDLYWGKPYPRTQPQKKFSAEEEP FSMTPRLQDEHSLPKRRKKHFQSPHSSPKKSKKLLFPHIEEPPKNRFYGG VEKLDIVAKLAQWQPALQCILRHVGAHTLDVMTKVSPAWKQAVYRSQRDL ERLQNHRLKLNLTKENPHVPKRCSHVPKANHTVPLQTSNHSSLANSAASL MDSGNSSIHLMDVDAGRVLREQTQRVKCPRCGRGSRVFISEAAKCGENLL SQTLPIGRTTSTFPCMTGPPLKRFLSLDLDEVRTSPQGPPYNFAECTSVI CQFRFCVNCLCKSHPGERCLVTELDTPSKLMMPRERLTPPQRAQNRDPKI TRKNSLKRLCF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rca1-PA | 411 | CG10800-PA | 1..411 | 1..411 | 2198 | 100 | Plus |