Clone GH14048 Report

Search the DGRC for GH14048

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:140
Well:48
Vector:pOT2
Associated Gene/TranscriptCG7131-RA
Protein status:GH14048.pep: gold
Preliminary Size:2046
Sequenced Size:2059

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7131 2001-01-01 Release 2 assignment
CG7131 2002-06-07 Blastp of sequenced clone
CG7131 2003-01-01 Sim4 clustering to Release 3
CG7131 2008-04-29 Release 5.5 accounting
CG7131 2008-08-15 Release 5.9 accounting
CG7131 2008-12-18 5.12 accounting

Clone Sequence Records

GH14048.complete Sequence

2059 bp (2059 high quality bases) assembled on 2002-06-07

GenBank Submission: AY119515

> GH14048.complete
GAACACATCGGGAAACTTTTCGTTGTCTAGTGTCTTTGCAAAATTATTCT
TTAGTCGTTTCGGCAGTGTCAAGTCTACTCAATCGTTTCTCCCAGCTCCG
AGCAAACAAAATTATTTCCATTGACAATTTTCCAGTTTTCGTCAGCTCCA
CATCGCCGTGTCGGTTTGTTTGATTTCAAGTTTCTGGAGGTTATTGTCCC
ATAATCAGCCATGTCCGGTGATTGCAACACGTATTGCCAAAATGCCTGCG
ATCCCTGCCAGGCGCCCACGGATTTCTCGCCCTGTCCGCCGAATTCAACG
TGTCCGCCTTGCGACTGCGGCGACTATGCAGGATGCTGCTACCAGCAGCC
GCCGCGCACCATGCCCATCCTGCCCAAGTCGCACTTCATGCGCTCCACAG
CGCCGCTGGACACGGACACCATATACCGACGATCGTTCTATGCTAACTGT
GGCGACAACATTAGGGCCCGACCCGTAATGCCGTGCTCCCAAATACGAGC
ATCCACGGCGCCGCTGGAAAAGTGCACCATACAGAAGTTATCCTACATGC
CACCCTGTCCGGTTAAGCGGACGCCACCCATTGTTCCCATGGAGAGCGGC
CTGCGCTTCGAGGGACCCATCTATGCGATGACCTCGCAGAAGCACGACTA
CGTGCCCAAGGGGATCGTGAAGCGGGATCCCATTAAGCCGCGTGTGGCTA
TCTGCACGTCGAATGCACCGATGGAGCGCTGTACTATCCAGAAGCTGAGC
TACATGCCCATCGATGTGTGCCAGAATCCGCCTCCGAAGGCCATGGTCCA
GGGATCGCACTACTGCAAGCCGGCAGGACCCATGGAGCGCTGCACCATCC
AAAAGCTGTCCTACATGCCGGTCTGTTTGCCGGCCAAGGAGCCCACGCCC
TGGGCCGACAAAATACGTTGTGTGCCGCCGCGCTACTCCAATGTCTGCAC
CACCTACAACCTAAGCTACATGCCCAACTGCAATGAGGCACGTACGGCTC
CGGTGACGCCGCTTACCACCTTGCGCTTCTGTGGCAACGACGCCGGTTCC
GGCAGCACGGTGTACAAGCTGAGCTACATGCCCGTGGATGCCTCCAGGAC
CAAACCGGCGCCCGTCCTGCCCAGGGACACTTTCTGCCGGCCCTCAGGAC
CGCTGGAAAGGTGCACCATTCAAAAGCTGTCCTATCAACCGAACTGCACG
GAGCGCACTCCTCCGATTCGCCCGATGGAAAATGGTCTGCGATTCGACGG
GCCCATGTATGCGATGACCACTCAGAAACACGATTTTGTGGCCAAGCCCC
ACGTGAGGAGGGCTCCGATCATGCCGAGAACGGCCTTCTGCCGGCCCACT
GGAGCCATGGAGCGCTGCACGGTGAACAAGTTGTCGTACATGCCGGTGGA
TGTCACCTGTTTCCCACGCGCCGAGTCCGTCCGACCACGACAGGGATTCT
GCCGGAACGAGGGACCCATGGAAAAGTGCACCACATACAAACTCAGCTAC
TTGCCGAACTGTGTGCCGCCCAAGGAGCCACTGCCGTGGGCCAGGTACAC
ATCCTACTGCCGGCCAACCGGACCTATTGAGAAGTGTACCATCCAGAAAC
TTAGCTACGGACCGCCAGGTGCCTTCCAGCGCTGCGGAGGTCCTTGTGGA
ACTGGCGCTAACGATGGCACCTTTCCCAAAGCCGGCATTTGTTAGCCTGG
AAATACATTATGGTTGCTCTGAAGAATCCGTCTCCCAAGCTCATCCCGAG
TTCTACGTTTTATGTTCAAGCTAAATCTTTCAGTCCACGTCTTCTAAAGA
GATATGTTGTTTTCTGTTGTAAATGCTTGTCAAAGGGTTCGCTTTGCGAA
CTGCATCCATTAATCGAGCGGCGCTATCCGTTTGCTTCGCTGCACCATCG
CTTTTATCCGATTTTGTCAATCCCATATGCATATACAGAAAATTGCCGGT
GATCCAATACATGGCTTATGAATTATGGTGTATTCCTCATTGTCAAATTA
AACTCTGTTCACAGAAATATAGAAATCCAGTAAATCACGGAAAAAAAAAA
AAAAAAAAA

GH14048.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:51:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG7131-RA 2109 CG7131-RA 65..2106 1..2042 10210 100 Plus
CG7131-RC 1980 CG7131-RC 284..1977 349..2042 8470 100 Plus
CG7131-RC 1980 CG7131-RC 1..283 1..283 1415 100 Plus
CG8064-RA 3031 CG8064-RA 2901..3031 2042..1912 655 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:46:37
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 14111896..14113071 1176..1 5880 100 Minus
chr3R 27901430 chr3R 14111374..14111840 1641..1175 2335 100 Minus
chr3R 27901430 chr3R 14110914..14111316 2040..1638 2015 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:50:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:46:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18287602..18288777 1176..1 5880 100 Minus
3R 32079331 3R 18287080..18287546 1641..1175 2335 100 Minus
3R 32079331 3R 18286618..18287022 2042..1638 2025 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:24:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 18028433..18029608 1176..1 5880 100 Minus
3R 31820162 3R 18027911..18028377 1641..1175 2335 100 Minus
3R 31820162 3R 18027449..18027853 2042..1638 2025 100 Minus
Blast to na_te.dros performed on 2019-03-16 09:46:35 has no hits.

GH14048.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:47:15 Download gff for GH14048.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 14110914..14111314 1640..2040 100 <- Minus
chr3R 14111376..14111838 1177..1639 100 <- Minus
chr3R 14111896..14113071 1..1176 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:41:27 Download gff for GH14048.complete
Subject Subject Range Query Range Percent Splice Strand
CG7131-RA 1..1485 211..1695 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:28:38 Download gff for GH14048.complete
Subject Subject Range Query Range Percent Splice Strand
CG7131-RA 1..1485 211..1695 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:51:38 Download gff for GH14048.complete
Subject Subject Range Query Range Percent Splice Strand
CG7131-RA 1..1485 211..1695 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:18:57 Download gff for GH14048.complete
Subject Subject Range Query Range Percent Splice Strand
CG7131-RA 1..1485 211..1695 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:20:10 Download gff for GH14048.complete
Subject Subject Range Query Range Percent Splice Strand
CG7131-RA 1..1485 211..1695 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:57:34 Download gff for GH14048.complete
Subject Subject Range Query Range Percent Splice Strand
CG7131-RA 1..2040 1..2040 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:28:37 Download gff for GH14048.complete
Subject Subject Range Query Range Percent Splice Strand
CG7131-RA 1..2040 1..2040 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:51:38 Download gff for GH14048.complete
Subject Subject Range Query Range Percent Splice Strand
CG7131-RA 1..2040 1..2040 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:18:57 Download gff for GH14048.complete
Subject Subject Range Query Range Percent Splice Strand
CG7131-RA 1..2040 1..2040 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:20:10 Download gff for GH14048.complete
Subject Subject Range Query Range Percent Splice Strand
CG7131-RA 1..2040 1..2040 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:47:15 Download gff for GH14048.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18286620..18287020 1640..2040 100 <- Minus
3R 18287082..18287544 1177..1639 100 <- Minus
3R 18287602..18288777 1..1176 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:47:15 Download gff for GH14048.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18286620..18287020 1640..2040 100 <- Minus
3R 18287082..18287544 1177..1639 100 <- Minus
3R 18287602..18288777 1..1176 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:47:15 Download gff for GH14048.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18286620..18287020 1640..2040 100 <- Minus
3R 18287082..18287544 1177..1639 100 <- Minus
3R 18287602..18288777 1..1176 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:51:38 Download gff for GH14048.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14112342..14112742 1640..2040 100 <- Minus
arm_3R 14112804..14113266 1177..1639 100 <- Minus
arm_3R 14113324..14114499 1..1176 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:52:28 Download gff for GH14048.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18027451..18027851 1640..2040 100 <- Minus
3R 18027913..18028375 1177..1639 100 <- Minus
3R 18028433..18029608 1..1176 100   Minus

GH14048.hyp Sequence

Translation from 210 to 1694

> GH14048.hyp
MSGDCNTYCQNACDPCQAPTDFSPCPPNSTCPPCDCGDYAGCCYQQPPRT
MPILPKSHFMRSTAPLDTDTIYRRSFYANCGDNIRARPVMPCSQIRASTA
PLEKCTIQKLSYMPPCPVKRTPPIVPMESGLRFEGPIYAMTSQKHDYVPK
GIVKRDPIKPRVAICTSNAPMERCTIQKLSYMPIDVCQNPPPKAMVQGSH
YCKPAGPMERCTIQKLSYMPVCLPAKEPTPWADKIRCVPPRYSNVCTTYN
LSYMPNCNEARTAPVTPLTTLRFCGNDAGSGSTVYKLSYMPVDASRTKPA
PVLPRDTFCRPSGPLERCTIQKLSYQPNCTERTPPIRPMENGLRFDGPMY
AMTTQKHDFVAKPHVRRAPIMPRTAFCRPTGAMERCTVNKLSYMPVDVTC
FPRAESVRPRQGFCRNEGPMEKCTTYKLSYLPNCVPPKEPLPWARYTSYC
RPTGPIEKCTIQKLSYGPPGAFQRCGGPCGTGANDGTFPKAGIC*

GH14048.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:48:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG7131-PA 494 CG7131-PA 1..494 1..494 2795 100 Plus

GH14048.pep Sequence

Translation from 210 to 1694

> GH14048.pep
MSGDCNTYCQNACDPCQAPTDFSPCPPNSTCPPCDCGDYAGCCYQQPPRT
MPILPKSHFMRSTAPLDTDTIYRRSFYANCGDNIRARPVMPCSQIRASTA
PLEKCTIQKLSYMPPCPVKRTPPIVPMESGLRFEGPIYAMTSQKHDYVPK
GIVKRDPIKPRVAICTSNAPMERCTIQKLSYMPIDVCQNPPPKAMVQGSH
YCKPAGPMERCTIQKLSYMPVCLPAKEPTPWADKIRCVPPRYSNVCTTYN
LSYMPNCNEARTAPVTPLTTLRFCGNDAGSGSTVYKLSYMPVDASRTKPA
PVLPRDTFCRPSGPLERCTIQKLSYQPNCTERTPPIRPMENGLRFDGPMY
AMTTQKHDFVAKPHVRRAPIMPRTAFCRPTGAMERCTVNKLSYMPVDVTC
FPRAESVRPRQGFCRNEGPMEKCTTYKLSYLPNCVPPKEPLPWARYTSYC
RPTGPIEKCTIQKLSYGPPGAFQRCGGPCGTGANDGTFPKAGIC*

GH14048.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:50:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23145-PA 493 GF23145-PA 1..493 1..494 2307 89.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:50:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16542-PA 502 GG16542-PA 1..502 1..494 2534 97 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:50:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22282-PA 488 GH22282-PA 5..488 12..494 2131 82.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:12:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG7131-PA 494 CG7131-PA 1..494 1..494 2795 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:50:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23090-PA 483 GI23090-PA 3..483 14..494 2066 80.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:50:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12383-PA 495 GL12383-PA 1..495 1..494 2199 85.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:50:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20125-PA 495 GA20125-PA 1..495 1..494 2199 85.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:50:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15307-PA 494 GM15307-PA 1..494 1..494 2569 99.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:50:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20185-PA 241 GD20185-PA 1..241 254..494 1239 97.9 Plus
Dsim\GD20185-PA 241 GD20185-PA 8..215 49..255 440 47.4 Plus
Dsim\GD20185-PA 241 GD20185-PA 1..215 113..327 240 33.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:50:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22710-PA 488 GJ22710-PA 5..488 12..494 2174 83.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:50:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22395-PA 489 GK22395-PA 1..489 1..494 2103 81.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:50:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25216-PA 200 GE25216-PA 1..200 1..200 1011 97.5 Plus
Dyak\GE25217-PA 105 GE25217-PA 1..69 254..322 358 100 Plus
Dyak\GE25216-PA 200 GE25216-PA 69..186 282..398 315 54.2 Plus
Dyak\GE25216-PA 200 GE25216-PA 49..183 332..468 171 34.3 Plus
Dyak\GE25216-PA 200 GE25216-PA 43..198 187..342 153 34.3 Plus