Clone GH14121 Report

Search the DGRC for GH14121

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:141
Well:21
Vector:pOT2
Associated Gene/TranscriptCG8043-RA
Protein status:GH14121.pep: gold
Preliminary Size:1489
Sequenced Size:1265

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8043 2001-01-01 Release 2 assignment
CG8043 2003-01-01 Sim4 clustering to Release 3
CG8043 2003-02-24 Blastp of sequenced clone
CG8043 2008-04-29 Release 5.5 accounting
CG8043 2008-08-15 Release 5.9 accounting
CG8043 2008-12-18 5.12 accounting

Clone Sequence Records

GH14121.complete Sequence

1265 bp (1265 high quality bases) assembled on 2003-02-24

GenBank Submission: BT004880

> GH14121.complete
TCAATTCCAAATGTTATGAACCGGGTGCCAAAAAATCAGTTCCTTGCTCG
ACTTTGTTTTGAGTACCAAATTTAAGTTTCTGCTGCTAGATATATCGAAT
AAGTTTAATCAAATTTCCAGCACAAGCATGAATAGATGTTCGAATCCGTG
GTTTCTGCGCGCCGTGCGCCATCACATACGTAATCTCCACGAGATGAGGA
TTCCATACGCCCGTCCGGTGGGCCCAAATCAGCGCAATTTCACGTTGGAG
CCGCTGGGAAATCGAGAACTCATCCGTGTCCACGGGGCCGAGGTGGTGCC
ATTCCTGCAGGGTCTTGCGACCAACGATGTGGCCCGGATTCAGTCGCCGG
GGGGTCCTGCCTCAATGTACGCCCATTTTCTCAACAAGGCGGGCAGGCTG
CTGTACGACACCATCTTGTACCGCACCAACAACCCGGAAACCATCCTTGT
TGAGTGCGATCGGGAGGCTTCCTCGGACTTCCGACGCCATCTTCGCACCT
ACCGCGTTCGCAGGCGCATTGAGGTCGACAGTGTAGACGACGAGTATACC
CCTTGGGTTATGTTTAACCTCAAGGACGCTTCGGAGGCTGTACCCAATCC
ACATCCAGACTTATTTGTGTCTCCCGACCCGAGGCTGCATGTCCTTGGCA
CTCGCATCCTGGCCCCCACCGACATGGACTGGTCCAAGCTGTCCAAATGT
TTTGCTGACTTCGGTACCGCCACAGCAGCCTCCTCCGACAATAGTTATCA
ACTGCTGCGCTACAAGCAAGGAGTGGGCGAGGGCTGCTCGGAACTGACAC
CGGGCAAATGTTTTCCCCTCGAAGCGAATGCGGATTACCTGCATGGCGTG
AGCTTCCACAAGGGCTGCTATGTGGGCCAGGAGCTAACTGCCCGCGTCCA
TCATTCGGGCGTGATCCGCAAGCGATACATGCCCATCCGGTTGACGGCCC
CAATTGATGTGGGTTCCAGCCAGGACGTAACTTCTTTGGCTGGAGCGAAA
CTTGGACGCGTCTTTGGCTTTGCGCACAAGCATGGTATTGCACTGCTGCG
CATCGAGAAGGTTCTCAACGGCCGTCCTGAGTTGATGATCGATGGCGAGC
GCTGTTATGTTGAACGTCCAGAATGGTGGCCGGAGGATTTGCCTGGAAAG
CGTCGCATGGCTTTCGCTGAGTGACTTACGAACTGATTTGACCAAATATT
GTTATCATACTATTGTTATAAGTGTAGTAAATGTATATAGTCCTCGTAAA
AAAAAAAAAAAAAAA

GH14121.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:18:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG8043-RA 1252 CG8043-RA 6..1252 1..1247 6235 100 Plus
CG8043.b 1269 CG8043.b 147..1269 125..1247 5615 100 Plus
CG8043.a 1276 CG8043.a 154..1276 125..1247 5615 100 Plus
CG8043.b 1269 CG8043.b 6..131 1..126 630 100 Plus
CG8043.a 1276 CG8043.a 6..131 1..126 630 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:02:41
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 4503083..4504205 125..1247 5570 99.7 Plus
chr3R 27901430 chr3R 4502894..4503019 1..126 630 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:50:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:02:39
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8677111..8678234 125..1248 5620 100 Plus
3R 32079331 3R 8676922..8677047 1..126 630 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:57:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 8417942..8419065 125..1248 5620 100 Plus
3R 31820162 3R 8417753..8417878 1..126 630 100 Plus
Blast to na_te.dros performed on 2019-03-16 07:02:40 has no hits.

GH14121.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:03:53 Download gff for GH14121.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 4502894..4503019 1..126 100 -> Plus
chr3R 4503085..4504205 127..1247 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:41:47 Download gff for GH14121.complete
Subject Subject Range Query Range Percent Splice Strand
CG8043-RA 1..1047 128..1174 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:48:33 Download gff for GH14121.complete
Subject Subject Range Query Range Percent Splice Strand
CG8043-RA 1..1047 128..1174 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:05:55 Download gff for GH14121.complete
Subject Subject Range Query Range Percent Splice Strand
CG8043-RA 1..1047 128..1174 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:39:57 Download gff for GH14121.complete
Subject Subject Range Query Range Percent Splice Strand
CG8043-RA 1..1047 128..1174 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:25:38 Download gff for GH14121.complete
Subject Subject Range Query Range Percent Splice Strand
CG8043-RA 1..1047 128..1174 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:00:57 Download gff for GH14121.complete
Subject Subject Range Query Range Percent Splice Strand
CG8043-RA 6..1252 1..1247 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:48:33 Download gff for GH14121.complete
Subject Subject Range Query Range Percent Splice Strand
CG8043-RA 6..1252 1..1247 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:05:55 Download gff for GH14121.complete
Subject Subject Range Query Range Percent Splice Strand
CG8043-RA 8..1254 1..1247 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:39:57 Download gff for GH14121.complete
Subject Subject Range Query Range Percent Splice Strand
CG8043-RA 6..1252 1..1247 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:25:38 Download gff for GH14121.complete
Subject Subject Range Query Range Percent Splice Strand
CG8043-RA 8..1254 1..1247 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:03:53 Download gff for GH14121.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8677113..8678233 127..1247 100   Plus
3R 8676922..8677047 1..126 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:03:53 Download gff for GH14121.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8677113..8678233 127..1247 100   Plus
3R 8676922..8677047 1..126 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:03:53 Download gff for GH14121.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8677113..8678233 127..1247 100   Plus
3R 8676922..8677047 1..126 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:05:55 Download gff for GH14121.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4502644..4502769 1..126 100 -> Plus
arm_3R 4502835..4503955 127..1247 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:10:18 Download gff for GH14121.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8417944..8419064 127..1247 100   Plus
3R 8417753..8417878 1..126 100 -> Plus

GH14121.pep Sequence

Translation from 127 to 1173

> GH14121.pep
MNRCSNPWFLRAVRHHIRNLHEMRIPYARPVGPNQRNFTLEPLGNRELIR
VHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAGRLLYDTILYRT
NNPETILVECDREASSDFRRHLRTYRVRRRIEVDSVDDEYTPWVMFNLKD
ASEAVPNPHPDLFVSPDPRLHVLGTRILAPTDMDWSKLSKCFADFGTATA
ASSDNSYQLLRYKQGVGEGCSELTPGKCFPLEANADYLHGVSFHKGCYVG
QELTARVHHSGVIRKRYMPIRLTAPIDVGSSQDVTSLAGAKLGRVFGFAH
KHGIALLRIEKVLNGRPELMIDGERCYVERPEWWPEDLPGKRRMAFAE*

GH14121.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:25:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17494-PA 281 GF17494-PA 15..281 81..348 1059 74.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:25:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11944-PA 348 GG11944-PA 1..348 1..348 1768 94.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:25:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18001-PA 354 GH18001-PA 3..349 2..345 1062 59.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:09:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG8043-PA 348 CG8043-PA 1..348 1..348 1869 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:25:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10516-PA 344 GI10516-PA 1..344 1..348 1173 64 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:25:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23521-PA 340 GL23521-PA 1..340 1..348 1155 63.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:25:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20785-PA 340 GA20785-PA 1..340 1..348 1164 64.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:25:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23750-PA 347 GM23750-PA 1..347 1..348 1826 98 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:25:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18562-PA 347 GD18562-PA 1..347 1..348 1816 97.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:25:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23197-PA 344 GJ23197-PA 1..344 1..348 1156 63.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:25:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10994-PA 353 GK10994-PA 1..353 1..348 1172 64.5 Plus
Dwil\GK12899-PA 353 GK12899-PA 1..353 1..348 1170 64.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:25:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25894-PA 348 GE25894-PA 1..348 1..348 1763 93.7 Plus

GH14121.hyp Sequence

Translation from 127 to 1173

> GH14121.hyp
MNRCSNPWFLRAVRHHIRNLHEMRIPYARPVGPNQRNFTLEPLGNRELIR
VHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAGRLLYDTILYRT
NNPETILVECDREASSDFRRHLRTYRVRRRIEVDSVDDEYTPWVMFNLKD
ASEAVPNPHPDLFVSPDPRLHVLGTRILAPTDMDWSKLSKCFADFGTATA
ASSDNSYQLLRYKQGVGEGCSELTPGKCFPLEANADYLHGVSFHKGCYVG
QELTARVHHSGVIRKRYMPIRLTAPIDVGSSQDVTSLAGAKLGRVFGFAH
KHGIALLRIEKVLNGRPELMIDGERCYVERPEWWPEDLPGKRRMAFAE*

GH14121.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:49:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG8043-PA 348 CG8043-PA 1..348 1..348 1869 100 Plus