BDGP Sequence Production Resources |
Search the DGRC for GH14143
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 141 |
Well: | 43 |
Vector: | pOT2 |
Associated Gene/Transcript | v-RA |
Protein status: | GH14143.pep: gold |
Preliminary Size: | 1806 |
Sequenced Size: | 1306 |
Gene | Date | Evidence |
---|---|---|
CG2155 | 2001-01-01 | Release 2 assignment |
CG2155 | 2001-07-04 | Blastp of sequenced clone |
CG2155 | 2003-01-01 | Sim4 clustering to Release 3 |
v | 2008-04-29 | Release 5.5 accounting |
v | 2008-08-15 | Release 5.9 accounting |
v | 2008-12-18 | 5.12 accounting |
1306 bp (1306 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051478
> GH14143.complete CCGCTCGAGGAGTCACGATCTGATCTGAGCTGTGCACCATGAGCTGTCCC TATGCAGGAAACGGAAACGATCACGATGATTCGGCGGTGCCATTAACCAC GGAAGTGGGCAAAATCTATGGAGAGTATCTGATGCTGGACAAACTGCTGG ATGCCCAGTGTATGCTCTCCGAGGAGGACAAGCGACCCGTGCACGATGAG CATCTGTTCATCATCACGCACCAGGCCTACGAGCTTTGGTTCAAGCAGAT CATCTTTGAGTTCGACTCCATACGAGACATGTTGGATGCAGAGGTCATCG ATGAAACCAAGACGCTGGAGATTGTCAAGCGACTGAACCGAGTGGTTCTG ATTCTAAAACTCCTGGTGGACCAAGTGCCCATTCTGGAGACCATGACCCC GCTTGACTTCATGGACTTCCGCAAGTACCTGGCACCCGCATCTGGTTTCC AGTCGCTGCAGTTCCGTTTGATCGAGAACAAGCTGGGAGTTCTGACAGAG CAGCGGGTGAGATACAACCAGAAGTACTCGGATGTCTTTAGCGACGAGGA GGCGCGGAATTCGATTCGCAACTCGGAGAAAGATCCCTCGCTACTGGAGC TAGTGCAGCGATGGCTGGAGAGGACGCCCGGACTGGAGGAGAGTGGCTTC AACTTCTGGGCCAAGTTTCAGGAGAGCGTCGATCGATTCCTGGAGGCGCA GGTACAGAGCGCCATGGAGGAGCCCGTGGAGAAGGCGAAAAACTACCGCC TCATGGACATTGAGAAGCGACGCGAGGTGTATCGCTCCATCTTTGATCCG GCAGTGCACGATGCACTGGTGCGACGTGGGGATCGCCGGTTTAGCCATCG TGCCCTCCAGGGAGCCATCATGATCACCTTCTATAGGGATGAACCCAGAT TCAGCCAGCCACACCAGTTGCTCACCCTGCTCATGGACATCGACTCGTTA ATAACCAAGTGGAGATACAATCACGTGATCATGGTGCAACGCATGATTGG ATCCCAACAGTTGGGCACTGGTGGCTCGTCTGGATATCAATATCTGCGCT CCACTCTCAGTGATCGGTACAAGGTGTTTCTGGATCTGTTCAATCTGTCC ACTTTTCTGATTCCCCGCGAGGCGATTCCACCGCTGGACGAGACCATTCG CAAGAAACTGATCAACAAAAGTGTCTGACAATCGGCAGGGTATCCAATTG GTCAATGTTTGGCTATGCGTTGTTTGTTCTGCCTACTGTTTTGTCGTTTT GGTGTAATAAAATTACTTGTTTAGTCTTTGTTATCACAAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
v-RA | 1529 | v-RA | 173..1460 | 1..1288 | 6440 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 10815838..10816444 | 360..966 | 2945 | 99 | Plus |
chrX | 22417052 | chrX | 10816702..10816932 | 1057..1287 | 1155 | 100 | Plus |
chrX | 22417052 | chrX | 10815428..10815589 | 64..225 | 795 | 99.4 | Plus |
chrX | 22417052 | chrX | 10815649..10815783 | 225..359 | 675 | 100 | Plus |
chrX | 22417052 | chrX | 10816536..10816629 | 967..1060 | 470 | 100 | Plus |
chrX | 22417052 | chrX | 10815292..10815355 | 1..64 | 320 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 10924536..10925142 | 360..966 | 3035 | 100 | Plus |
X | 23542271 | X | 10925401..10925632 | 1057..1288 | 1160 | 100 | Plus |
X | 23542271 | X | 10924126..10924287 | 64..225 | 810 | 100 | Plus |
X | 23542271 | X | 10924347..10924481 | 225..359 | 675 | 100 | Plus |
X | 23542271 | X | 10925234..10925327 | 967..1060 | 470 | 100 | Plus |
X | 23542271 | X | 10923990..10924053 | 1..64 | 320 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 10932634..10933240 | 360..966 | 3035 | 100 | Plus |
X | 23527363 | X | 10933499..10933730 | 1057..1288 | 1160 | 100 | Plus |
X | 23527363 | X | 10932224..10932385 | 64..225 | 810 | 100 | Plus |
X | 23527363 | X | 10932445..10932579 | 225..359 | 675 | 100 | Plus |
X | 23527363 | X | 10933332..10933425 | 967..1060 | 470 | 100 | Plus |
X | 23527363 | X | 10932088..10932151 | 1..64 | 320 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 10815650..10815783 | 226..359 | 100 | -> | Plus |
chrX | 10815292..10815355 | 1..64 | 100 | -> | Plus |
chrX | 10815429..10815589 | 65..225 | 99 | -> | Plus |
chrX | 10815838..10816444 | 360..966 | 99 | -> | Plus |
chrX | 10816536..10816629 | 967..1060 | 100 | -> | Plus |
chrX | 10816706..10816932 | 1061..1287 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
v-RA | 1..1140 | 39..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
v-RA | 1..1140 | 39..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
v-RA | 1..1140 | 39..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
v-RA | 1..1140 | 39..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
v-RA | 1..1140 | 39..1178 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
v-RA | 1..1287 | 1..1287 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
v-RA | 1..1287 | 1..1287 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
v-RA | 19..1305 | 1..1287 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
v-RA | 1..1287 | 1..1287 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
v-RA | 19..1305 | 1..1287 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10924127..10924287 | 65..225 | 100 | -> | Plus |
X | 10924348..10924481 | 226..359 | 100 | -> | Plus |
X | 10923990..10924053 | 1..64 | 100 | -> | Plus |
X | 10924536..10925142 | 360..966 | 100 | -> | Plus |
X | 10925234..10925327 | 967..1060 | 100 | -> | Plus |
X | 10925405..10925631 | 1061..1287 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10924127..10924287 | 65..225 | 100 | -> | Plus |
X | 10924348..10924481 | 226..359 | 100 | -> | Plus |
X | 10923990..10924053 | 1..64 | 100 | -> | Plus |
X | 10924536..10925142 | 360..966 | 100 | -> | Plus |
X | 10925234..10925327 | 967..1060 | 100 | -> | Plus |
X | 10925405..10925631 | 1061..1287 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10924127..10924287 | 65..225 | 100 | -> | Plus |
X | 10924348..10924481 | 226..359 | 100 | -> | Plus |
X | 10923990..10924053 | 1..64 | 100 | -> | Plus |
X | 10924536..10925142 | 360..966 | 100 | -> | Plus |
X | 10925234..10925327 | 967..1060 | 100 | -> | Plus |
X | 10925405..10925631 | 1061..1287 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 10818023..10818086 | 1..64 | 100 | -> | Plus |
arm_X | 10818160..10818320 | 65..225 | 100 | -> | Plus |
arm_X | 10818381..10818514 | 226..359 | 100 | -> | Plus |
arm_X | 10818569..10819175 | 360..966 | 100 | -> | Plus |
arm_X | 10819267..10819360 | 967..1060 | 100 | -> | Plus |
arm_X | 10819438..10819664 | 1061..1287 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10932634..10933240 | 360..966 | 100 | -> | Plus |
X | 10933332..10933425 | 967..1060 | 100 | -> | Plus |
X | 10933503..10933729 | 1061..1287 | 100 | Plus | |
X | 10932088..10932151 | 1..64 | 100 | -> | Plus |
X | 10932225..10932385 | 65..225 | 100 | -> | Plus |
X | 10932446..10932579 | 226..359 | 100 | -> | Plus |
Translation from 38 to 1177
> GH14143.pep MSCPYAGNGNDHDDSAVPLTTEVGKIYGEYLMLDKLLDAQCMLSEEDKRP VHDEHLFIITHQAYELWFKQIIFEFDSIRDMLDAEVIDETKTLEIVKRLN RVVLILKLLVDQVPILETMTPLDFMDFRKYLAPASGFQSLQFRLIENKLG VLTEQRVRYNQKYSDVFSDEEARNSIRNSEKDPSLLELVQRWLERTPGLE ESGFNFWAKFQESVDRFLEAQVQSAMEEPVEKAKNYRLMDIEKRREVYRS IFDPAVHDALVRRGDRRFSHRALQGAIMITFYRDEPRFSQPHQLLTLLMD IDSLITKWRYNHVIMVQRMIGSQQLGTGGSSGYQYLRSTLSDRYKVFLDL FNLSTFLIPREAIPPLDETIRKKLINKSV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\v-PA | 380 | GF20476-PA | 1..380 | 1..379 | 1929 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18380-PA | 379 | GG18380-PA | 1..379 | 1..379 | 2000 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12679-PA | 377 | GH12679-PA | 1..377 | 1..376 | 1840 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
v-PA | 379 | CG2155-PA | 1..379 | 1..379 | 1950 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16256-PA | 380 | GI16256-PA | 1..380 | 1..379 | 1878 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18243-PA | 380 | GL18243-PA | 1..380 | 1..379 | 1903 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15272-PA | 380 | GA15272-PA | 1..380 | 1..379 | 1903 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11443-PA | 379 | GM11443-PA | 1..379 | 1..379 | 2017 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\v-PA | 379 | GD16993-PA | 1..379 | 1..379 | 2017 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16721-PA | 358 | GJ16721-PA | 1..358 | 1..379 | 1731 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19977-PA | 380 | GK19977-PA | 1..380 | 1..379 | 1901 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\v-PA | 379 | GE15897-PA | 1..379 | 1..379 | 2004 | 99.2 | Plus |
Translation from 38 to 1177
> GH14143.hyp MSCPYAGNGNDHDDSAVPLTTEVGKIYGEYLMLDKLLDAQCMLSEEDKRP VHDEHLFIITHQAYELWFKQIIFEFDSIRDMLDAEVIDETKTLEIVKRLN RVVLILKLLVDQVPILETMTPLDFMDFRKYLAPASGFQSLQFRLIENKLG VLTEQRVRYNQKYSDVFSDEEARNSIRNSEKDPSLLELVQRWLERTPGLE ESGFNFWAKFQESVDRFLEAQVQSAMEEPVEKAKNYRLMDIEKRREVYRS IFDPAVHDALVRRGDRRFSHRALQGAIMITFYRDEPRFSQPHQLLTLLMD IDSLITKWRYNHVIMVQRMIGSQQLGTGGSSGYQYLRSTLSDRYKVFLDL FNLSTFLIPREAIPPLDETIRKKLINKSV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
v-PA | 379 | CG2155-PA | 1..379 | 1..379 | 1950 | 100 | Plus |