Clone GH14155 Report

Search the DGRC for GH14155

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:141
Well:55
Vector:pOT2
Associated Gene/TranscriptCG4723-RA
Protein status:GH14155.pep: gold
Preliminary Size:2182
Sequenced Size:2290

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4723 2002-01-01 Sim4 clustering to Release 2
CG4723 2002-05-02 Blastp of sequenced clone
CG4723 2003-01-01 Sim4 clustering to Release 3
CG4723 2008-04-29 Release 5.5 accounting
CG4723 2008-08-15 Release 5.9 accounting
CG4723 2008-12-18 5.12 accounting

Clone Sequence Records

GH14155.complete Sequence

2290 bp (2290 high quality bases) assembled on 2002-05-02

GenBank Submission: AY102663

> GH14155.complete
CTTCACCGAGCTCCGGCAGCATGTCGGACCCGTGTTGGACGACAGTATTT
TTATGGCTGCTCTGGCTGCCACACCTCCAGCAAAATGCTTTGGTTTCTGG
CGAGGATCTACCACCGCCGTTCCAGCGGATCTACCAATCGGAACAGACGG
TACGACGTTCAAAGGCTCAGGATATGGGCAGTCATGTGAACAAAAGCATC
GATCCCTGTGTGGATTTCTATGCATATGCATGCGGCAATTGGAAGTCAAC
TCTAACCCCACAGCAGCAATTGCAGCAGCAAACAGACCGGGAGCTTCTTC
TGCTCGTGGAGGAGGCTGTAAGGAGAGAGGATAGCGTCATAGTTCGACAG
GCCAAGGAGCTATTCAAGTCCTGCGTATCGGCACAGGCTCATCAGAGCCA
GCAGCAGCAGCATTTCCTCAGCGAGTTCATCAACCAGAACGGAGGCTTTC
CAGCTGTTCCCGGTTCCCAATGGGCAGTGCATCACCATGACTACAATTGG
CTTAGTGTGTTAGGTGGTCTAAGACTTCGCTATGGAATGGACATCCTGAT
CGGACTCCGAGTGGGCTATAACTATGGCAATGTAAATGAGAACAGCTTGT
ATTTAAGTGAACCGAGCACATTGATTCCAACCGAGTTGTGCACTCGGAAT
CGCTCAGATATTCGGGACTCCATTTACGAACCCCTTGAACATCGAGTGGC
ATCCGAACTAAAATCTTGGTTGGCATTGGGACACGATGAATCCGCTCGTC
TAGCTGCCGACATTCTTAGTTTCGAGCATGAGTTATGTGGTGGAATGAAA
GGTGGATCCTTTGAATCCTGGGATGCCGAGGAACAGCTCTATCTAGCCAA
CTACACCCGCAAAACGTTGCGTGAGTTCTCGAATTCGATCGAACTGGATT
TGGATTCATATGTAAGGGCAAGTTTTGGCCAGGATATTTATAAACCCGTT
TACATGGCAGCACCGGAATATTTTCGCCAACTTAAGCGCACTGTGAGTGC
CCACAACATAAGTCTAGTGGCTAACTATATAATGTATCGAGCGGTGTCTG
CTCTGAATTTTCCTCTAGATGATCGCCCGCAGTTAAGGAAACGGGAGTGC
TTGGAACGAACTAAAGAACTACTTCCCACGGCATTGGGTGAATTATATGC
CCGGCAGTTTGGAACTGAAGATGGCAGAATAGATTTGGACAACCTTTATG
ATACATTAAAGACAGCTTTGAGGCAAAGTCTAGGTGCGGAATGGTTGGTG
GAGGGCACTCAGCGGGTGGGCCAGGAAAAACTTAGGAACCTAAAGCTGCA
GATGCCCACTTACGAGCGTCCAGTGATCCTTAAACTGCAGCTGGAACGTG
GCAATTATTGGCAAAATCTCCGCCAGCTGCTGGGAGTGGTTCAGTCCCAA
AGAAACAATCGACTTTTCGAAGAGTTTTTGCCTGCTCCCACCGATCCCGT
GGAGGCCTATGAGGCCAGGGTGCGACTGAGACCAGTTCAGCGACGTTTGG
ATATGGGTTTGGCCCTGCTGCAGCCACCAGCCTACGATCCTCGCTATGGC
CATGCCATCCGCTATGCCACATTGGGCGTACAGCTGGCGCAACAGTTGGT
GATGGCTTTTGACGATCCGCATTGGTCGGTGGGATTGCTCGAGCGGGATA
ATTGGGATGGTCAAACAGCCTGGCAATATCACATTCGAAGCAATTGCTTT
GCCCGCCAGGTGGACAATTATTTGAGGCCCAATGTAAGTGCCACCACGCA
GCTGATCACGGACAGCGCAGCCATCAATGTCGCCTTTCGGGCGTATCTCA
CATGGCTGGGTTTCCAGGAGCCAAACAACGACTTCACTAAACTGACCAAG
GAGACTCTGCCGGATCTGAACTACTCAAACACGGCACTATTCTTCTTAGC
TTATGCCCAAGAGCATTGCAGTCTGGAGGAGGCTCGTCCCAGGGATGAGC
AAGGGACTCCGGAAGGATACCTCTATAGTGCACGACAGAATCACACCTGG
ACTCGCCTGCTTGTAAACGGACCTTTGCGAAACTCAGTTGAATTTGCGAG
TGAATTTCGGTGCCCCATTGGATCACCCATGAATCCTGCATCCAAGTGCA
TCATATACTAACAATAATTGGATTTTAAACTATTCTATTCTATTTTTAAC
TATTCTATTCTATTTCACTTATTGAATTAATAGTAGCATCTGTATTGAAT
TCTTCCTAGGCTAACGTTGAATAAACCGCACATCTAAACACCAATTATTG
TTTGTTTAGAATAATCTAAATTAAAAAAAAAAAAAAAAAA

GH14155.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:09:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG4723-RA 2272 CG4723-RA 1..2272 1..2272 11360 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:03:48
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 18584935..18587203 2272..1 11145 99.5 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:50:58 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:03:46
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22761438..22763711 2274..1 11370 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:40:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 22502269..22504542 2274..1 11370 100 Minus
Blast to na_te.dros performed on 2019-03-16 13:03:47 has no hits.

GH14155.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:04:31 Download gff for GH14155.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 18584935..18587203 1..2272 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:41:55 Download gff for GH14155.complete
Subject Subject Range Query Range Percent Splice Strand
CG4723-RA 1..2091 21..2111 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:53:46 Download gff for GH14155.complete
Subject Subject Range Query Range Percent Splice Strand
CG4723-RA 1..2091 21..2111 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:14:53 Download gff for GH14155.complete
Subject Subject Range Query Range Percent Splice Strand
CG4723-RA 1..2091 21..2111 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:46:17 Download gff for GH14155.complete
Subject Subject Range Query Range Percent Splice Strand
CG4723-RA 1..2091 21..2111 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:12:44 Download gff for GH14155.complete
Subject Subject Range Query Range Percent Splice Strand
CG4723-RA 1..2091 21..2111 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:32:16 Download gff for GH14155.complete
Subject Subject Range Query Range Percent Splice Strand
CG4723-RA 1..2272 1..2272 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:53:46 Download gff for GH14155.complete
Subject Subject Range Query Range Percent Splice Strand
CG4723-RA 1..2272 1..2272 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:14:53 Download gff for GH14155.complete
Subject Subject Range Query Range Percent Splice Strand
CG4723-RA 1..2272 1..2272 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:46:17 Download gff for GH14155.complete
Subject Subject Range Query Range Percent Splice Strand
CG4723-RA 1..2272 1..2272 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:12:44 Download gff for GH14155.complete
Subject Subject Range Query Range Percent Splice Strand
CG4723-RA 1..2272 1..2272 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:04:31 Download gff for GH14155.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22761440..22763711 1..2272 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:04:31 Download gff for GH14155.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22761440..22763711 1..2272 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:04:31 Download gff for GH14155.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22761440..22763711 1..2272 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:14:53 Download gff for GH14155.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18587162..18589433 1..2272 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:18:50 Download gff for GH14155.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22502271..22504542 1..2272 100   Minus

GH14155.hyp Sequence

Translation from 2 to 2110

> GH14155.hyp
SPSSGSMSDPCWTTVFLWLLWLPHLQQNALVSGEDLPPPFQRIYQSEQTV
RRSKAQDMGSHVNKSIDPCVDFYAYACGNWKSTLTPQQQLQQQTDRELLL
LVEEAVRREDSVIVRQAKELFKSCVSAQAHQSQQQQHFLSEFINQNGGFP
AVPGSQWAVHHHDYNWLSVLGGLRLRYGMDILIGLRVGYNYGNVNENSLY
LSEPSTLIPTELCTRNRSDIRDSIYEPLEHRVASELKSWLALGHDESARL
AADILSFEHELCGGMKGGSFESWDAEEQLYLANYTRKTLREFSNSIELDL
DSYVRASFGQDIYKPVYMAAPEYFRQLKRTVSAHNISLVANYIMYRAVSA
LNFPLDDRPQLRKRECLERTKELLPTALGELYARQFGTEDGRIDLDNLYD
TLKTALRQSLGAEWLVEGTQRVGQEKLRNLKLQMPTYERPVILKLQLERG
NYWQNLRQLLGVVQSQRNNRLFEEFLPAPTDPVEAYEARVRLRPVQRRLD
MGLALLQPPAYDPRYGHAIRYATLGVQLAQQLVMAFDDPHWSVGLLERDN
WDGQTAWQYHIRSNCFARQVDNYLRPNVSATTQLITDSAAINVAFRAYLT
WLGFQEPNNDFTKLTKETLPDLNYSNTALFFLAYAQEHCSLEEARPRDEQ
GTPEGYLYSARQNHTWTRLLVNGPLRNSVEFASEFRCPIGSPMNPASKCI
IY*

GH14155.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:49:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG4723-PA 696 CG4723-PA 1..696 7..702 3687 100 Plus
CG4725-PA 741 CG4725-PA 47..741 45..702 936 32.1 Plus
CG14526-PC 707 CG14526-PC 44..707 47..702 589 26.4 Plus
CG14527-PA 700 CG14527-PA 37..700 47..702 540 25.2 Plus
CG14528-PA 682 CG14528-PA 3..682 13..702 514 25.4 Plus

GH14155.pep Sequence

Translation from 20 to 2110

> GH14155.pep
MSDPCWTTVFLWLLWLPHLQQNALVSGEDLPPPFQRIYQSEQTVRRSKAQ
DMGSHVNKSIDPCVDFYAYACGNWKSTLTPQQQLQQQTDRELLLLVEEAV
RREDSVIVRQAKELFKSCVSAQAHQSQQQQHFLSEFINQNGGFPAVPGSQ
WAVHHHDYNWLSVLGGLRLRYGMDILIGLRVGYNYGNVNENSLYLSEPST
LIPTELCTRNRSDIRDSIYEPLEHRVASELKSWLALGHDESARLAADILS
FEHELCGGMKGGSFESWDAEEQLYLANYTRKTLREFSNSIELDLDSYVRA
SFGQDIYKPVYMAAPEYFRQLKRTVSAHNISLVANYIMYRAVSALNFPLD
DRPQLRKRECLERTKELLPTALGELYARQFGTEDGRIDLDNLYDTLKTAL
RQSLGAEWLVEGTQRVGQEKLRNLKLQMPTYERPVILKLQLERGNYWQNL
RQLLGVVQSQRNNRLFEEFLPAPTDPVEAYEARVRLRPVQRRLDMGLALL
QPPAYDPRYGHAIRYATLGVQLAQQLVMAFDDPHWSVGLLERDNWDGQTA
WQYHIRSNCFARQVDNYLRPNVSATTQLITDSAAINVAFRAYLTWLGFQE
PNNDFTKLTKETLPDLNYSNTALFFLAYAQEHCSLEEARPRDEQGTPEGY
LYSARQNHTWTRLLVNGPLRNSVEFASEFRCPIGSPMNPASKCIIY*

GH14155.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:19:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18284-PA 691 GF18284-PA 1..691 1..696 2632 71.7 Plus
Dana\GF18285-PA 738 GF18285-PA 46..738 39..696 841 30.8 Plus
Dana\GF17017-PA 691 GF17017-PA 3..691 13..696 536 24.1 Plus
Dana\GF18283-PA 691 GF18283-PA 28..691 31..696 447 24.8 Plus
Dana\GF17990-PA 686 GF17990-PA 37..686 38..696 445 25.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:19:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12481-PA 696 GG12481-PA 1..696 1..696 3512 94.8 Plus
Dere\GG12482-PA 741 GG12482-PA 47..741 39..696 932 32.8 Plus
Dere\GG11623-PA 699 GG11623-PA 13..699 16..696 545 24.3 Plus
Dere\GG11622-PA 699 GG11622-PA 36..699 42..696 533 23.9 Plus
Dere\GG11619-PA 683 GG11619-PA 3..682 7..696 445 24.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:19:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18323-PA 697 GH18323-PA 24..697 25..696 1936 55.9 Plus
Dgri\GH18334-PA 743 GH18334-PA 37..743 41..696 931 33.8 Plus
Dgri\GH13212-PA 692 GH13212-PA 29..692 41..696 589 26.6 Plus
Dgri\GH13201-PA 693 GH13201-PA 50..693 40..696 508 23.6 Plus
Dgri\GH18312-PA 682 GH18312-PA 32..682 44..696 447 25.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:16:33
Subject Length Description Subject Range Query Range Score Percent Strand
Nepl14-PA 696 CG4723-PA 1..696 1..696 3687 100 Plus
Nepl13-PA 741 CG4725-PA 47..741 39..696 936 32.1 Plus
Nepl21-PC 707 CG14526-PC 44..707 41..696 589 26.4 Plus
Nepl20-PA 700 CG14527-PA 37..700 41..696 540 25.2 Plus
Nepl18-PA 682 CG14528-PA 3..682 7..696 514 25.4 Plus
Nepl15-PA 686 CG4721-PA 24..686 30..696 444 24 Plus
Nepl19-PA 671 CG14523-PA 54..666 41..696 440 24.7 Plus
Nepl17-PA 681 CG14529-PA 36..681 41..696 439 25.4 Plus
Nep1-PD 849 CG5905-PD 172..849 37..696 397 24 Plus
Nep1-PC 849 CG5905-PC 172..849 37..696 397 24 Plus
Nep1-PA 849 CG5905-PA 172..849 37..696 397 24 Plus
Nep1-PB 849 CG5905-PB 172..849 37..696 397 24 Plus
Nep4-PC 978 CG4058-PC 352..978 80..696 397 24.7 Plus
Nep4-PB 978 CG4058-PB 352..978 80..696 397 24.7 Plus
Nep4-PA 1040 CG4058-PA 414..1040 80..696 397 24.7 Plus
Nep7-PA 717 CG5527-PA 52..712 46..692 378 24 Plus
Nep3-PC 786 CG9565-PC 119..786 56..696 323 22 Plus
Nep3-PB 786 CG9565-PB 119..786 56..696 323 22 Plus
Nep3-PA 786 CG9565-PA 119..786 56..696 323 22 Plus
Nepl12-PA 702 CG8358-PA 57..697 49..692 249 21.1 Plus
Nepl7-PB 669 CG15485-PB 33..669 45..696 244 20.6 Plus
Nepl7-PA 669 CG15485-PA 33..669 45..696 244 20.6 Plus
Nep2-PC 763 CG9761-PC 104..763 60..696 231 18 Plus
Nep2-PA 763 CG9761-PA 104..763 60..696 231 18 Plus
Nep2-PB 774 CG9761-PB 104..774 60..696 212 17.9 Plus
Nep5-PD 882 CG6265-PD 541..882 356..696 181 25.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:19:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10777-PA 694 GI10777-PA 33..694 34..696 2121 60.4 Plus
Dmoj\GI10778-PA 764 GI10778-PA 69..764 41..696 909 31.9 Plus
Dmoj\GI22369-PA 700 GI22369-PA 37..700 40..696 605 27.1 Plus
Dmoj\GI22368-PA 688 GI22368-PA 26..688 16..696 505 25.1 Plus
Dmoj\GI22367-PA 692 GI22367-PA 44..692 40..696 466 25 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:19:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23772-PA 692 GL23772-PA 33..692 34..696 2401 68.2 Plus
Dper\GL23773-PA 766 GL23773-PA 35..766 16..696 896 33.1 Plus
Dper\GL24195-PA 709 GL24195-PA 45..709 42..696 563 26.9 Plus
Dper\GL23771-PA 685 GL23771-PA 15..685 25..696 466 25.1 Plus
Dper\GL13855-PA 689 GL13855-PA 36..689 42..696 397 24.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:19:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18386-PA 691 GA18386-PA 33..691 34..696 2387 68.4 Plus
Dpse\GA18387-PA 765 GA18387-PA 38..765 20..696 895 33.1 Plus
Dpse\GA13054-PA 709 GA13054-PA 45..709 42..696 567 27 Plus
Dpse\GA18384-PA 682 GA18384-PA 12..682 25..696 464 25.4 Plus
Dpse\GA26947-PA 666 GA26947-PA 19..666 40..696 424 22.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:19:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23612-PA 696 GM23612-PA 1..696 1..696 3628 96.4 Plus
Dsec\GM12744-PA 698 GM12744-PA 13..698 16..696 586 26.3 Plus
Dsec\GM12743-PA 700 GM12743-PA 2..700 8..696 539 25.8 Plus
Dsec\GM12742-PA 682 GM12742-PA 3..682 7..696 495 25.1 Plus
Dsec\GM23614-PA 321 GM23614-PA 1..321 375..696 446 32.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:19:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18422-PA 696 GD18422-PA 1..696 1..696 3663 97.3 Plus
Dsim\GD18423-PA 741 GD18423-PA 47..741 39..696 921 32.6 Plus
Dsim\GD21387-PA 685 GD21387-PA 20..685 41..696 582 26.5 Plus
Dsim\GD18009-PA 671 GD18009-PA 54..666 41..696 430 24.7 Plus
Dsim\GD21385-PA 598 GD21385-PA 54..598 133..696 428 25.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:19:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14376-PA 689 GJ14376-PA 30..689 34..696 2117 59.7 Plus
Dvir\GJ14377-PA 725 GJ14377-PA 25..725 41..696 919 33.1 Plus
Dvir\GJ24403-PA 710 GJ24403-PA 46..710 41..696 602 27.1 Plus
Dvir\GJ14375-PA 685 GJ14375-PA 31..685 40..696 483 26.4 Plus
Dvir\GJ24402-PA 670 GJ24402-PA 25..670 40..696 480 24.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:19:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11620-PA 684 GK11620-PA 18..684 27..696 2224 62.6 Plus
Dwil\GK11621-PA 747 GK11621-PA 26..747 18..696 877 31.8 Plus
Dwil\GK22544-PA 686 GK22544-PA 19..686 33..696 586 26.8 Plus
Dwil\GK11619-PA 688 GK11619-PA 24..688 33..696 473 25.1 Plus
Dwil\GK22548-PA 651 GK22548-PA 5..651 44..696 461 24 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:19:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24004-PA 696 GE24004-PA 1..696 1..696 3486 93.7 Plus
Dyak\GE24005-PA 741 GE24005-PA 49..741 41..696 929 32.7 Plus
Dyak\GE19949-PA 697 GE19949-PA 35..697 41..696 617 27 Plus
Dyak\GE23808-PA 1025 GE23808-PA 330..1025 9..696 557 25.1 Plus
Dyak\GE23807-PA 682 GE23807-PA 3..682 7..696 466 23.8 Plus
Dyak\GE23808-PA 1025 GE23808-PA 3..335 10..342 248 23.7 Plus