Clone GH14157 Report

Search the DGRC for GH14157

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:141
Well:57
Vector:pOT2
Associated Gene/TranscriptCG3184-RA
Protein status:GH14157.pep: gold
Preliminary Size:1219
Sequenced Size:1193

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3184 2001-01-01 Release 2 assignment
CG3184 2003-01-01 Sim4 clustering to Release 3
CG3184 2003-01-13 Blastp of sequenced clone
CG3184 2008-04-29 Release 5.5 accounting
CG3184 2008-08-15 Release 5.9 accounting
CG3184 2008-12-18 5.12 accounting

Clone Sequence Records

GH14157.complete Sequence

1193 bp (1193 high quality bases) assembled on 2003-01-13

GenBank Submission: AY060700

> GH14157.complete
ATCGATTGCTGATAACATCTTTTCATAAACATGTTTACAACGCTCCACAG
CGAGGATACGGAATATTCGGCAGATTCTGTGGAGTGGCTGACACACGATG
ATGCGGCAACGGGTTTCTTTGCCTGCGGCACCTATCAGTTGGTCCAGGAG
GAGGACGAGCCGGCGGCGGAGACTTCAGCCAAGCGTCCACGCAAGGGTCG
CGTTTATTTATACCAGTTTGAAGAGGAAAACTGCCGCCTGGAGCGGCTAC
AGTGCATCGAAACGTCTGCCATTCTCGACATGAAGTGGCTGCCGGCCTGG
AGCAGTGAGTGTAATCCCCACCTGGCCACGGTCAACTCTTTAGGCCAGAT
GGAATTGTACGAGTTTCTCCAGGATGCGAAGCTACTGCAGAGGCGTACGT
GTTTTAGCCTGGCGGAGCAGGATTCGTCGGAGGAAGCGCCATTGGCGCTG
GCCCTAGACTGGCAACATGACGGGCAGCACATCCGACTGGCCATCTCCGA
TTCCAAAGGCGGCCTAAATCTATTGAGCTACTCATCACAGGGTGAGATAA
TCCGCGAACGGTCGTGGTTGTCCCATGGCTTTGAGGCTTGGACCTGTGCC
TTTGATCGTTGGTCACCGCACATTCTGTACAGTGGTGGCGACGATATGCT
GCTCATGGCCCACGATCTGCGCACCAAGCAGCGTGCGTGGACCAACCGGG
CGCACATGGCTGGAGTCACCTGTCTGCTAAGTCATCCGCGGCACGAAAAC
CATCTGCTCACGGGTAGCTATGATGAGCAGTTGCGTCTCTTCGACACCAG
ATCGATGAAGCGATCACTGGCGGAACTGGACTTGAGCGGAGGCATCTGGA
GGCTGAAGCCGCATCCTGCCCAGCCCGATCTCATCCTGGCCGCCTGCATG
TACACCAACTTTAGCGTGGTGCAGCTGGATGTCGCGGCACCTGGCCTGAG
TTTACTGGGCGCCTATGAGGAGCATAAGAGCATCTGCTACGGGGCCGATT
GGGCACCATGGAGAAACAAGGACGATGCGTCCTTGACCATGGCCACTTGC
TCCTTTTATGATCACACGTTGTGTGTGAGTCGCGTGGATATTAACAAATG
AATTCGATATCTGTATATTATGTTATGTGACTAAAAACTAAAAGAAAAAT
AAACATTTGCTGGCTTATGTTTTTCAAAAAAAAAAAAAAAAAA

GH14157.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:28:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG3184-RA 1175 CG3184-RA 1..1175 1..1175 5875 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:47:20
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 6579770..6580945 1175..1 5740 99.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:51:00 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:47:18
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6687594..6688770 1177..1 5885 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:04:44
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 6695692..6696868 1177..1 5885 100 Minus
Blast to na_te.dros performed 2019-03-16 23:47:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsil\Loa 7779 Dsil\Loa DSV28T24 7779bp AKA(S39346) Derived from X60177 (Rel. 37, Last updated, Version 8). 2736..2781 157..113 110 73.9 Minus

GH14157.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:48:07 Download gff for GH14157.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 6579770..6580945 1..1175 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:41:56 Download gff for GH14157.complete
Subject Subject Range Query Range Percent Splice Strand
CG3184-RA 1..1071 31..1101 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:58:48 Download gff for GH14157.complete
Subject Subject Range Query Range Percent Splice Strand
CG3184-RA 1..1071 31..1101 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:50:18 Download gff for GH14157.complete
Subject Subject Range Query Range Percent Splice Strand
CG3184-RA 1..1071 31..1101 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:49:31 Download gff for GH14157.complete
Subject Subject Range Query Range Percent Splice Strand
CG3184-RA 1..1071 31..1101 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:59:35 Download gff for GH14157.complete
Subject Subject Range Query Range Percent Splice Strand
CG3184-RA 1..1071 31..1101 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:15:29 Download gff for GH14157.complete
Subject Subject Range Query Range Percent Splice Strand
CG3184-RA 1..1175 1..1175 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:58:47 Download gff for GH14157.complete
Subject Subject Range Query Range Percent Splice Strand
CG3184-RA 1..1175 1..1175 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:18 Download gff for GH14157.complete
Subject Subject Range Query Range Percent Splice Strand
CG3184-RA 5..1179 1..1175 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:49:31 Download gff for GH14157.complete
Subject Subject Range Query Range Percent Splice Strand
CG3184-RA 1..1175 1..1175 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:59:35 Download gff for GH14157.complete
Subject Subject Range Query Range Percent Splice Strand
CG3184-RA 5..1179 1..1175 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:48:07 Download gff for GH14157.complete
Subject Subject Range Query Range Percent Splice Strand
X 6687596..6688770 1..1175 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:48:07 Download gff for GH14157.complete
Subject Subject Range Query Range Percent Splice Strand
X 6687596..6688770 1..1175 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:48:07 Download gff for GH14157.complete
Subject Subject Range Query Range Percent Splice Strand
X 6687596..6688770 1..1175 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:18 Download gff for GH14157.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6581629..6582803 1..1175 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:21:03 Download gff for GH14157.complete
Subject Subject Range Query Range Percent Splice Strand
X 6695694..6696868 1..1175 100   Minus

GH14157.pep Sequence

Translation from 30 to 1100

> GH14157.pep
MFTTLHSEDTEYSADSVEWLTHDDAATGFFACGTYQLVQEEDEPAAETSA
KRPRKGRVYLYQFEEENCRLERLQCIETSAILDMKWLPAWSSECNPHLAT
VNSLGQMELYEFLQDAKLLQRRTCFSLAEQDSSEEAPLALALDWQHDGQH
IRLAISDSKGGLNLLSYSSQGEIIRERSWLSHGFEAWTCAFDRWSPHILY
SGGDDMLLMAHDLRTKQRAWTNRAHMAGVTCLLSHPRHENHLLTGSYDEQ
LRLFDTRSMKRSLAELDLSGGIWRLKPHPAQPDLILAACMYTNFSVVQLD
VAAPGLSLLGAYEEHKSICYGADWAPWRNKDDASLTMATCSFYDHTLCVS
RVDINK*

GH14157.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:31:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20846-PA 354 GF20846-PA 4..354 2..356 1332 69.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:31:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17664-PA 444 GG17664-PA 1..348 1..348 1720 90.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 05:31:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24237-PA 375 GH24237-PA 3..373 2..352 995 57.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:05:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG3184-PA 356 CG3184-PA 1..356 1..356 1916 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 05:31:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21432-PA 374 GI21432-PA 3..369 2..353 1127 61.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 05:31:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13368-PA 359 GL13368-PA 4..354 2..355 1197 61.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 05:31:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16516-PA 359 GA16516-PA 4..354 2..355 1206 62.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:31:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12563-PA 236 GM12563-PA 15..236 135..356 1157 95.9 Plus
Dsec\GM12558-PA 231 GM12558-PA 1..72 1..72 322 84.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 05:31:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16450-PA 354 GJ16450-PA 2..351 1..355 1073 59.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 05:31:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25004-PA 350 GK25004-PA 4..349 2..354 1101 61 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:31:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16453-PA 357 GE16453-PA 1..357 1..356 1671 88.2 Plus

GH14157.hyp Sequence

Translation from 30 to 1100

> GH14157.hyp
MFTTLHSEDTEYSADSVEWLTHDDAATGFFACGTYQLVQEEDEPAAETSA
KRPRKGRVYLYQFEEENCRLERLQCIETSAILDMKWLPAWSSECNPHLAT
VNSLGQMELYEFLQDAKLLQRRTCFSLAEQDSSEEAPLALALDWQHDGQH
IRLAISDSKGGLNLLSYSSQGEIIRERSWLSHGFEAWTCAFDRWSPHILY
SGGDDMLLMAHDLRTKQRAWTNRAHMAGVTCLLSHPRHENHLLTGSYDEQ
LRLFDTRSMKRSLAELDLSGGIWRLKPHPAQPDLILAACMYTNFSVVQLD
VAAPGLSLLGAYEEHKSICYGADWAPWRNKDDASLTMATCSFYDHTLCVS
RVDINK*

GH14157.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:49:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG3184-PA 356 CG3184-PA 1..356 1..356 1916 100 Plus