Clone GH14326 Report

Search the DGRC for GH14326

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:143
Well:26
Vector:pOT2
Associated Gene/TranscriptCG3045-RA
Protein status:GH14326.pep: gold
Preliminary Size:1710
Sequenced Size:1728

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3045 2001-01-01 Release 2 assignment
CG3045 2001-09-19 Blastp of sequenced clone
CG3045 2003-01-01 Sim4 clustering to Release 3
CG3045 2008-04-29 Release 5.5 accounting
CG3045 2008-08-15 Release 5.9 accounting
CG3045 2008-12-18 5.12 accounting

Clone Sequence Records

GH14326.complete Sequence

1728 bp (1728 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058376

> GH14326.complete
ACAACATGCAACATCCAGTGGATTTGCGCTATTAGCAAAGCTTGCTCATC
TCTGTTGTGCGCGTTTCGTAGCGAATGGCAAAAGCCAAAGTAATTTCACG
TGTTGCTTTTAAATTGTTTATTTCTCATTAACCGCCAAAATGAGTGCAAC
AAATGACAAAAAAGTTGTGATAAATAAACGATTAAAAGGCTTAAGCCGAG
AGGCACTTGAAAAACTGACTCAAACCGAGCTGATCGACAAGGTTATCCAA
CTGGAGGCCTATAACTTTCAGTTGCGGAATCTGCTGCAGAAAAAGTTAAG
CGAGAAAGATAAACATGATAAGGAATACTCTGGATTAATTGGAAACGAAG
CGGAGGGCAAAGTTAGCCAGGTGGCCAAGACATCCAGCAAAGTGCAGAAG
ATACGTAAGTTCGATTGGAGCAGTGCACACAAGCGTCATGTCTTGCTTAA
GATTACCTACTTTGGTTGGGATTATCAAGGATTTGCCTGCCAGGAGGATT
CCAATGATACTATCGAATCCAACTTGTTCCGCGCTCTAGCTCGTACCTGC
CTCATCGAATCTCGCGCCACTTCCAATTATCACCGCTGTGGACGCACAGA
CAAGGAGGTGAGCGCCTTCTGCCAGGTTATCTCCATAGATCTGCGCAGCA
AGCATCCGCCCGAATCCCAGCTGGATCCCACAGCGCTTTCCTCCGAGATT
GACTACTGTGGACTCCTGAATCGAGTGCTGCCCAAGAACATTCAGTGCGT
GGCTTGGATGCCACTGCGCAGTCCGGTTTATAGCGCTCGATTTGATTGCG
TTTCCCGCACCTATCGTTACTACTTTCCTAAGGGTGACCTGGACATTGCT
GCCATGCGTAAAGCCTGTGATCTCCTAGTGCGTCACGCCGACTTCCGTAA
TTTCTGCAAAATGGACGTGCACAACGGAGTAACCAACTACATGAGAAACT
TGCAATCTGCCAGGGTGGAAGCTTGTGATCAGACAAATCATACAAATTCA
GGCTACGACATGTACTACCTGGAGATTCAAGCAAATGCCTTCCTTTGGCA
CCAAATCCGTTGCATAATGGCGGTGCTTTTACTTGTTGGCCAAAAAAAGG
AAAACCCGGGCGTAATAAGTGACCTGCTTGATGTGGAGTCTAATCCCTGC
AAGCCTCAGTACACCCCCGCAATTGGATTGCCCTTAAATCTGTTTCGTTG
CGACTTTCGAGACCACACAACAAGAAGTGTAAACCATCCAAGCAGCGGTG
ATGCAGACGAAGAAGCCATGGATACAGCCGCCGACGAATCAAATGACTTA
AATGCTCCGGAGCACTTGGAGCGTGATCTTACAGCGTGGATTTACAATGA
GGAAAATCTACAAAAGCTTATTGAAAACACCCAGTGTGAGTGGACGCAAT
TTAGCGTTAAGAGCACCATGATACGCAATGTGCTGCAACAATTGGAAAAC
TTATTTGAAGAGAATTTTAAGCCAAAAGAGAAGGTACTGGCTCAGGTAAT
CCTGTTGCAAGATTCCGTCAATCCGCGTCAATATCAGCCTCTTTTAGAAC
GCAAACGATGTGAGAGTTTGGAGAACCGGATAGAGCATTTTGTAAAAAAG
CAACGACTGATTGTGAAGAATGAAACGGAAACAGAGTGATTTATTTTAAT
ATAATGTCATTGAAACAAAACGTATATTGCTTTTCAGGTAAATATATTAA
GGTTGTATGTAAAAAAAAAAAAAAAAAA

GH14326.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:22:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG3045-RA 1959 CG3045-RA 84..1796 1..1713 8565 100 Plus
a-RC 4656 a-RC 4611..4656 1713..1668 230 100 Minus
a-RA 4836 a-RA 4791..4836 1713..1668 230 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:43:43
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 18059530..18060094 1562..999 2640 98.2 Minus
chr2R 21145070 chr2R 18060149..18060636 1002..515 2365 99 Minus
chr2R 21145070 chr2R 18060840..18061262 423..1 1950 97.4 Minus
chr2R 21145070 chr2R 18059326..18059474 1710..1562 745 100 Minus
chr2R 21145070 chr2R 18060692..18060786 515..421 445 97.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:51:22 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:43:41
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22173007..22173570 1562..999 2820 100 Minus
2R 25286936 2R 22173625..22174112 1002..515 2440 100 Minus
2R 25286936 2R 22174316..22174738 423..1 2115 100 Minus
2R 25286936 2R 22172800..22172951 1713..1562 760 100 Minus
2R 25286936 2R 22174168..22174262 515..421 475 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:45:39
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 22174206..22174769 1562..999 2820 100 Minus
2R 25260384 2R 22174824..22175311 1002..515 2440 100 Minus
2R 25260384 2R 22175515..22175937 423..1 2115 100 Minus
2R 25260384 2R 22173999..22174150 1713..1562 760 100 Minus
2R 25260384 2R 22175367..22175461 515..421 475 100 Minus
Blast to na_te.dros performed on 2019-03-15 17:43:41 has no hits.

GH14326.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:44:24 Download gff for GH14326.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 18059326..18059473 1563..1710 100 <- Minus
chr2R 18059530..18060091 1002..1562 98 <- Minus
chr2R 18060150..18060635 516..1001 98 <- Minus
chr2R 18060692..18060783 424..515 97 <- Minus
chr2R 18060840..18061262 1..423 97   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:42:15 Download gff for GH14326.complete
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 1..1500 140..1639 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:07:31 Download gff for GH14326.complete
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 1..1500 140..1639 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:44:26 Download gff for GH14326.complete
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 1..1500 140..1639 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:38:16 Download gff for GH14326.complete
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 1..1500 140..1639 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:45:15 Download gff for GH14326.complete
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 1..1500 140..1639 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:57:36 Download gff for GH14326.complete
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 1..1708 1..1708 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:07:30 Download gff for GH14326.complete
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 1..1710 1..1710 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:44:26 Download gff for GH14326.complete
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 1..1663 48..1710 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:38:16 Download gff for GH14326.complete
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 1..1708 1..1708 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:45:15 Download gff for GH14326.complete
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 1..1663 48..1710 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:44:24 Download gff for GH14326.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22172803..22172950 1563..1710 100 <- Minus
2R 22173007..22173567 1002..1562 100 <- Minus
2R 22173626..22174111 516..1001 100 <- Minus
2R 22174168..22174259 424..515 100 <- Minus
2R 22174316..22174738 1..423 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:44:24 Download gff for GH14326.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22172803..22172950 1563..1710 100 <- Minus
2R 22173007..22173567 1002..1562 100 <- Minus
2R 22173626..22174111 516..1001 100 <- Minus
2R 22174168..22174259 424..515 100 <- Minus
2R 22174316..22174738 1..423 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:44:24 Download gff for GH14326.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22172803..22172950 1563..1710 100 <- Minus
2R 22173007..22173567 1002..1562 100 <- Minus
2R 22173626..22174111 516..1001 100 <- Minus
2R 22174168..22174259 424..515 100 <- Minus
2R 22174316..22174738 1..423 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:44:26 Download gff for GH14326.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18060308..18060455 1563..1710 100 <- Minus
arm_2R 18060512..18061072 1002..1562 100 <- Minus
arm_2R 18061131..18061616 516..1001 100 <- Minus
arm_2R 18061673..18061764 424..515 100 <- Minus
arm_2R 18061821..18062243 1..423 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:15:36 Download gff for GH14326.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22174002..22174149 1563..1710 100 <- Minus
2R 22174206..22174766 1002..1562 100 <- Minus
2R 22174825..22175310 516..1001 100 <- Minus
2R 22175367..22175458 424..515 100 <- Minus
2R 22175515..22175937 1..423 100   Minus

GH14326.hyp Sequence

Translation from 139 to 1638

> GH14326.hyp
MSATNDKKVVINKRLKGLSREALEKLTQTELIDKVIQLEAYNFQLRNLLQ
KKLSEKDKHDKEYSGLIGNEAEGKVSQVAKTSSKVQKIRKFDWSSAHKRH
VLLKITYFGWDYQGFACQEDSNDTIESNLFRALARTCLIESRATSNYHRC
GRTDKEVSAFCQVISIDLRSKHPPESQLDPTALSSEIDYCGLLNRVLPKN
IQCVAWMPLRSPVYSARFDCVSRTYRYYFPKGDLDIAAMRKACDLLVRHA
DFRNFCKMDVHNGVTNYMRNLQSARVEACDQTNHTNSGYDMYYLEIQANA
FLWHQIRCIMAVLLLVGQKKENPGVISDLLDVESNPCKPQYTPAIGLPLN
LFRCDFRDHTTRSVNHPSSGDADEEAMDTAADESNDLNAPEHLERDLTAW
IYNEENLQKLIENTQCEWTQFSVKSTMIRNVLQQLENLFEENFKPKEKVL
AQVILLQDSVNPRQYQPLLERKRCESLENRIEHFVKKQRLIVKNETETE*

GH14326.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:50:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG3045-PA 499 CG3045-PA 1..499 1..499 2623 100 Plus

GH14326.pep Sequence

Translation from 139 to 1638

> GH14326.pep
MSATNDKKVVINKRLKGLSREALEKLTQTELIDKVIQLEAYNFQLRNLLQ
KKLSEKDKHDKEYSGLIGNEAEGKVSQVAKTSSKVQKIRKFDWSSAHKRH
VLLKITYFGWDYQGFACQEDSNDTIESNLFRALARTCLIESRATSNYHRC
GRTDKEVSAFCQVISIDLRSKHPPESQLDPTALSSEIDYCGLLNRVLPKN
IQCVAWMPLRSPVYSARFDCVSRTYRYYFPKGDLDIAAMRKACDLLVRHA
DFRNFCKMDVHNGVTNYMRNLQSARVEACDQTNHTNSGYDMYYLEIQANA
FLWHQIRCIMAVLLLVGQKKENPGVISDLLDVESNPCKPQYTPAIGLPLN
LFRCDFRDHTTRSVNHPSSGDADEEAMDTAADESNDLNAPEHLERDLTAW
IYNEENLQKLIENTQCEWTQFSVKSTMIRNVLQQLENLFEENFKPKEKVL
AQVILLQDSVNPRQYQPLLERKRCESLENRIEHFVKKQRLIVKNETETE*

GH14326.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:58:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13245-PA 492 GF13245-PA 1..492 1..493 2192 81.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:58:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20714-PA 497 GG20714-PA 1..497 1..499 2319 87.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:58:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21331-PA 503 GH21331-PA 3..501 7..499 1905 71.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:32:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG3045-PA 499 CG3045-PA 1..499 1..499 2623 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:58:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20747-PA 500 GI20747-PA 2..487 6..495 1858 70.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:58:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11833-PA 421 GL11833-PA 1..404 1..403 1676 75.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:58:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15853-PA 497 GA15853-PA 1..497 1..496 2092 77.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:58:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15659-PA 498 GM15659-PA 1..498 1..499 2543 93.6 Plus
Dsec\GM20625-PA 248 GM20625-PA 1..236 52..288 1214 93.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:58:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15210-PA 498 GD15210-PA 1..498 1..499 2571 95.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:58:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20484-PA 509 GJ20484-PA 2..501 6..499 1930 72.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:58:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19511-PA 495 GK19511-PA 3..493 5..493 1889 71 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:58:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11697-PA 497 GE11697-PA 1..497 1..499 2460 91 Plus