Clone GH14349 Report

Search the DGRC for GH14349

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:143
Well:49
Vector:pOT2
Associated Gene/TranscriptCpr73D-RB
Protein status:GH14349.pep: validated full length
Preliminary Size:1877
Sequenced Size:1728

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9665 2001-07-04 Blastp of sequenced clone
CG9665 2003-01-01 Sim4 clustering to Release 3
Cpr73D 2008-04-29 Release 5.5 accounting
Cpr73D 2008-08-15 Release 5.9 accounting
Cpr73D 2008-12-18 5.12 accounting

Clone Sequence Records

GH14349.complete Sequence

1728 bp (1728 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051482

> GH14349.complete
GCAGATCGAGGAGACGGTCTACACAGCCGGACCACGTGGATTTCGCGTGA
ACGGACCGAAAATCCATCGGAAAATGGACCTGGCTCAGTATCCGGTACTG
CCGCGGGGAAGTCCGGACGATCCGCTGGCCGATCCCTTCGACGATCCATC
CTACAGCTTTAGTTTTCGCACTCCGGATCAGTCGCGCAGCGAGGAGAATG
ATTCCGGGAATAGGATAAGAGGTCTGTACTCCTATTTGGACGACGTGGGC
GAGCGGCACAGTGTTCGTTATGCAGCTGGAGCCGGAACCGGATTCGAGAT
CTCCAACGCTGTGCCGGACAGCCCATCTGTTGTGGCGTACTCCAGTCCTC
TGTACACGTCCCATCCCAAAGCACGCGGCAAGATGTCTGTGCAAAGGGGG
CCGGCTGGAAGCTATAAGCTGATCGCCTCAGGTTCGGATCACCGACGGGC
AGAAAGTCGAGCACCCGATGGCCTGGTGCGAGGAACCTACTCCTTCCTGG
ACGACAAGGGCGTGCAGCGGACAGTGGAGTATATAGCTGGAGCAGGAATT
GGCTACCGGGTGGTGCAAAATCGGATTGGTCCTGGAACCCATAACAATCC
CTCTGTGGCTGATTTTCGTTTGACAGATCCAGATTTCCGACTGGCTAATG
ATTTTGGCAGGGGTGCTGGTGGTGGCTTAGGTCCGAAGGGAGGTGGTGGT
GGATCAGGTGGGGGAAGTGTTTCGGTAGGAGCTTCGGGGCCAAGTGGTGG
TGCAGGTGGAGCGGGAAGGGGCCGTACTCCAAGCAGACCCGGAGGCAAAG
ATTACCTAAAGCCGGCTGATGGAGCAAGAGATAGGAATCGTGGAGATGGT
GATGCTGGGGCAGCTGATGAAAATCTGGGACACCATGCTGATGACCAAGG
GGATGACATTGGGCTTGGCAGCAGCTCCTCTGGTTCCACCAACTTTAATG
GCAAAGAAGACAGAAGAGGGTTCCCTGCGGGTAGTCCGCAACGGGGCAGT
ACTAGATACGATGCCGGAGGTGACAGCTCTCAGAGAGGTGGTTCAGGTAG
CTCCACGAGAAACAATGTTAGTGGGTCCCGAAACAGAAACCGATTCGGCG
GCGTTGGTGGAGTAAGTGTCTCCTCTGAGCGGGGAGCAGGAAGGGGAGGT
GCTGCCGGTGGTGGAAGCAGTCGTCGAGGAGGTGGAGCTGGAGCCTCCAG
GGAAGGCGACTCCGGCCTGGGCTACCTGCCGCCCACAGGTGGATCGGGCA
CCAGTGCCATGAGCGGACCCGGGGACAATTACCACCTCAACGATGACGAT
GTGGGCAGTTCACTGCCTCCTCTGGTCACCGCCAACCACCGAATTCTAGA
GATCGACAGGGATCGGGAGTGGGTGCAGCGACACCGCGACTCCACCGTCA
TCAAGAACGTGGGTAAATGGTACGTGGGCCTGCCGCCTGGTCAAAGTGTG
CGTGCCCATGTCCAGAACATCGACATAATACCCTTGGGCGGAAGGATCGG
ACTTTCGCCGTCGGAGGCACTGCGTCAGGATGAGATCGCCGAGCTGAATG
CCTCAAGGGAGCACTAAGCACCCATTGGATCTGTAGATCTGTAGTTTGTA
GTGCGTAGCTCTAAGTGATCAGTGTTGAGTAACCGAAACTGGGTTGACTC
CACATGGAAACTAAAACAGTATTTAAAGCGGAATACATTTTTTGCCTGTA
TCTGTAAAAAAAAAAAAAAAAAAAAAAA

GH14349.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:36:13
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr73D.a 2212 Cpr73D.a 454..2159 1..1706 8530 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:32:43
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 16928548..16930031 1705..220 7155 98.9 Minus
chr3L 24539361 chr3L 16930081..16930271 222..32 910 98.4 Minus
chr3L 24539361 chr3L 16931047..16931085 39..1 195 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:51:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:32:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16939099..16940585 1706..220 7435 100 Minus
3L 28110227 3L 16940635..16940825 222..32 925 99 Minus
3L 28110227 3L 16941601..16941639 39..1 195 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:57:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 16932199..16933685 1706..220 7435 100 Minus
3L 28103327 3L 16933735..16933925 222..32 925 98.9 Minus
3L 28103327 3L 16934701..16934739 39..1 195 100 Minus
Blast to na_te.dros performed on 2019-03-15 12:32:42 has no hits.

GH14349.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:33:21 Download gff for GH14349.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 16928548..16930029 222..1705 98 <- Minus
chr3L 16930082..16930263 40..221 99 <- Minus
chr3L 16931047..16931085 1..39 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:42:18 Download gff for GH14349.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr73D-RB 228..1794 1..1567 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:26:51 Download gff for GH14349.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr73D-RB 228..1794 1..1567 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:45:07 Download gff for GH14349.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr73D-RB 228..1794 1..1567 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:00:03 Download gff for GH14349.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr73D-RB 228..1794 1..1567 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:03:14 Download gff for GH14349.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr73D-RB 228..1794 1..1567 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:26:01 Download gff for GH14349.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr73D-RB 228..1930 1..1703 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:26:51 Download gff for GH14349.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr73D-RB 228..1932 1..1705 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:45:07 Download gff for GH14349.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr73D-RB 454..2158 1..1705 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:00:03 Download gff for GH14349.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr73D-RB 228..1930 1..1703 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:03:14 Download gff for GH14349.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr73D-RB 454..2158 1..1705 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:33:21 Download gff for GH14349.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16939100..16940583 222..1705 100 <- Minus
3L 16940636..16940817 40..221 100 <- Minus
3L 16941601..16941639 1..39 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:33:21 Download gff for GH14349.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16939100..16940583 222..1705 100 <- Minus
3L 16940636..16940817 40..221 100 <- Minus
3L 16941601..16941639 1..39 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:33:21 Download gff for GH14349.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16939100..16940583 222..1705 100 <- Minus
3L 16940636..16940817 40..221 100 <- Minus
3L 16941601..16941639 1..39 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:45:07 Download gff for GH14349.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16932200..16933683 222..1705 100 <- Minus
arm_3L 16933736..16933917 40..221 100 <- Minus
arm_3L 16934701..16934739 1..39 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:37:53 Download gff for GH14349.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16933736..16933917 40..221 100 <- Minus
3L 16934701..16934739 1..39 100   Minus
3L 16932200..16933683 222..1705 100 <- Minus

GH14349.hyp Sequence

Translation from 1 to 1566

> GH14349.hyp
QIEETVYTAGPRGFRVNGPKIHRKMDLAQYPVLPRGSPDDPLADPFDDPS
YSFSFRTPDQSRSEENDSGNRIRGLYSYLDDVGERHSVRYAAGAGTGFEI
SNAVPDSPSVVAYSSPLYTSHPKARGKMSVQRGPAGSYKLIASGSDHRRA
ESRAPDGLVRGTYSFLDDKGVQRTVEYIAGAGIGYRVVQNRIGPGTHNNP
SVADFRLTDPDFRLANDFGRGAGGGLGPKGGGGGSGGGSVSVGASGPSGG
AGGAGRGRTPSRPGGKDYLKPADGARDRNRGDGDAGAADENLGHHADDQG
DDIGLGSSSSGSTNFNGKEDRRGFPAGSPQRGSTRYDAGGDSSQRGGSGS
STRNNVSGSRNRNRFGGVGGVSVSSERGAGRGGAAGGGSSRRGGGAGASR
EGDSGLGYLPPTGGSGTSAMSGPGDNYHLNDDDVGSSLPPLVTANHRILE
IDRDREWVQRHRDSTVIKNVGKWYVGLPPGQSVRAHVQNIDIIPLGGRIG
LSPSEALRQDEIAELNASREH*

GH14349.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:51:20
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr73D-PB 597 CG9665-PB 77..597 1..521 2755 100 Plus
Cpr73D-PC 497 CG9665-PC 1..497 25..521 2626 100 Plus
Cpr47Ef-PD 601 CG13214-PD 256..432 219..424 226 35.9 Plus
Cpr47Ef-PC 612 CG13214-PC 256..432 219..424 226 35.9 Plus
Cpr47Ef-PD 601 CG13214-PD 146..498 48..422 216 27.6 Plus
Cpr47Ef-PC 612 CG13214-PC 146..528 48..424 212 27.8 Plus
Cpr47Ef-PD 601 CG13214-PD 346..565 221..424 209 34.1 Plus
Cpr47Ef-PC 612 CG13214-PC 346..576 221..424 203 34.7 Plus
caz-PD 355 CG3606-PD 175..342 219..395 195 34.3 Plus
Cpr47Ef-PD 601 CG13214-PD 369..583 219..415 178 31.1 Plus
Cpr47Ef-PD 601 CG13214-PD 63..315 219..424 173 29.2 Plus
Cpr47Ef-PC 612 CG13214-PC 63..315 219..424 173 29.2 Plus
Cpr47Ef-PD 601 CG13214-PD 411..600 180..415 160 30.4 Plus

GH14349.pep Sequence

Translation from 73 to 1566

> GH14349.pep
MDLAQYPVLPRGSPDDPLADPFDDPSYSFSFRTPDQSRSEENDSGNRIRG
LYSYLDDVGERHSVRYAAGAGTGFEISNAVPDSPSVVAYSSPLYTSHPKA
RGKMSVQRGPAGSYKLIASGSDHRRAESRAPDGLVRGTYSFLDDKGVQRT
VEYIAGAGIGYRVVQNRIGPGTHNNPSVADFRLTDPDFRLANDFGRGAGG
GLGPKGGGGGSGGGSVSVGASGPSGGAGGAGRGRTPSRPGGKDYLKPADG
ARDRNRGDGDAGAADENLGHHADDQGDDIGLGSSSSGSTNFNGKEDRRGF
PAGSPQRGSTRYDAGGDSSQRGGSGSSTRNNVSGSRNRNRFGGVGGVSVS
SERGAGRGGAAGGGSSRRGGGAGASREGDSGLGYLPPTGGSGTSAMSGPG
DNYHLNDDDVGSSLPPLVTANHRILEIDRDREWVQRHRDSTVIKNVGKWY
VGLPPGQSVRAHVQNIDIIPLGGRIGLSPSEALRQDEIAELNASREH*

GH14349.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:56:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10493-PA 562 GF10493-PA 63..256 1..194 968 95.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:56:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15839-PA 600 GG15839-PA 101..600 1..497 1875 88.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:56:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15128-PA 509 GH15128-PA 1..194 1..194 912 89.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:21:31
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr73D-PC 497 CG9665-PC 1..497 1..497 2626 100 Plus
Cpr73D-PB 597 CG9665-PB 101..597 1..497 2626 100 Plus
Cpr47Ef-PD 601 CG13214-PD 256..432 195..400 226 35.9 Plus
Cpr47Ef-PC 612 CG13214-PC 256..432 195..400 226 35.9 Plus
Cpr47Ef-PD 601 CG13214-PD 146..498 24..398 216 27.6 Plus
Cpr47Ef-PC 612 CG13214-PC 146..528 24..400 212 27.8 Plus
Cpr47Ef-PD 601 CG13214-PD 346..565 197..400 209 34.1 Plus
Cpr47Ef-PC 612 CG13214-PC 346..576 197..400 203 34.7 Plus
caz-PD 355 CG3606-PD 175..342 195..371 195 34.3 Plus
caz-PC 384 CG3606-PC 204..371 195..371 195 34.3 Plus
caz-PB 399 CG3606-PB 219..386 195..371 195 34.3 Plus
frm-PE 652 CG10625-PE 180..431 116..400 188 29.6 Plus
frm-PB 682 CG10625-PB 180..431 116..400 188 29.6 Plus
frm-PC 682 CG10625-PC 180..431 116..400 188 29.6 Plus
frm-PH 1180 CG10625-PH 180..431 116..400 188 29.6 Plus
CG17108-PA 342 CG17108-PA 13..204 190..400 186 32.3 Plus
resilin-PB 575 CG15920-PB 74..283 195..403 180 30.2 Plus
resilin-PA 620 CG15920-PA 74..283 195..403 180 30.2 Plus
Cpr47Ef-PD 601 CG13214-PD 369..583 195..391 178 31.1 Plus
Cpr47Ef-PD 601 CG13214-PD 63..315 195..400 173 29.2 Plus
Cpr47Ef-PC 612 CG13214-PC 63..315 195..400 173 29.2 Plus
CG17108-PA 342 CG17108-PA 45..264 156..400 173 31.2 Plus
HnRNP-K-PD 315 CG13425-PD 21..238 184..389 170 31.8 Plus
HnRNP-K-PB 413 CG13425-PB 116..333 184..389 170 31.8 Plus
HnRNP-K-PE 493 CG13425-PE 199..416 184..389 170 31.8 Plus
HnRNP-K-PF 496 CG13425-PF 199..416 184..389 170 31.8 Plus
HnRNP-K-PA 496 CG13425-PA 199..416 184..389 170 31.8 Plus
HnRNP-K-PC 502 CG13425-PC 205..422 184..389 170 31.8 Plus
CG17108-PA 342 CG17108-PA 165..341 194..404 169 31.7 Plus
CG17108-PA 342 CG17108-PA 16..248 191..403 166 28.6 Plus
resilin-PA 620 CG15920-PA 264..616 12..412 166 26.9 Plus
CG5172-PD 172 CG5172-PD 25..171 195..371 165 32 Plus
resilin-PB 575 CG15920-PB 331..571 169..412 163 30 Plus
fs(1)h-PB 2038 CG2252-PB 1743..1912 209..392 162 29.4 Plus
fs(1)h-PG 2046 CG2252-PG 1751..1920 209..392 162 29.4 Plus
Cpr47Ef-PD 601 CG13214-PD 411..600 156..391 160 30.4 Plus
CG9083-PB 317 CG9083-PB 48..299 193..403 158 28.7 Plus
resilin-PB 575 CG15920-PB 130..388 189..415 156 30.4 Plus
CG13376-PC 193 CG13376-PC 24..185 197..373 150 30.1 Plus
CG13376-PB 200 CG13376-PB 31..192 197..373 150 30.1 Plus
CG13376-PD 204 CG13376-PD 35..196 197..373 150 30.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:56:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12065-PA 527 GI12065-PA 375..527 319..497 467 66.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:56:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20693-PA 304 GL20693-PA 1..194 1..194 924 92.3 Plus
Dper\GL20693-PA 304 GL20693-PA 248..304 441..497 288 93 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:56:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21949-PA 525 GA21949-PA 1..525 1..497 1570 72.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:56:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24357-PA 597 GM24357-PA 101..597 1..497 2424 97.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:56:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12434-PA 1012 GD12434-PA 516..1012 1..497 2467 97.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:56:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13336-PA 457 GJ13336-PA 1..457 1..497 1533 67.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:56:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17150-PA 495 GK17150-PA 1..202 1..202 962 92.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:56:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22178-PA 589 GE22178-PA 89..589 1..497 1944 90.6 Plus