BDGP Sequence Production Resources |
Search the DGRC for GH14368
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 143 |
Well: | 68 |
Vector: | pOT2 |
Associated Gene/Transcript | ecd-RA |
Protein status: | GH14368.pep: gold |
Preliminary Size: | 2130 |
Sequenced Size: | 2148 |
Gene | Date | Evidence |
---|---|---|
CG5714 | 2001-01-01 | Release 2 assignment |
CG5714 | 2001-07-04 | Blastp of sequenced clone |
CG5714 | 2003-01-01 | Sim4 clustering to Release 3 |
ecd | 2008-04-29 | Release 5.5 accounting |
ecd | 2008-08-15 | Release 5.9 accounting |
ecd | 2008-12-18 | 5.12 accounting |
2148 bp (2148 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051483
> GH14368.complete GACAAAGGATGAGCAAGATTCCAGGCAGCAATCTGGAGTTCGTCCGCGAG GAGGACTTCGTGGAGTACTACATCTTTCCCAAGATCCCCGACAACGTACA GGATGAGGGCGCGCTGCGCAAACTGATGCTTCAGATCCGCAACGAGATCT CGGCCATTGTAAGGGAAAAGTCCTTAGAGCGCAGCTATCTGTGGCACAAG GACGAGTTTCAGCTTCAGGTGAGGCTGGGCGGCGCCGAGGAGCGCCTGCT GAACGAGGAGACAAACCCGGAGGAGGAGGCGGAACTGGGCGACCTCCCAC CGCACTTCCACGGCGTAACCCACTATGGCGACAACATCAGCGACGAGTGG TTCGTTGTCTATCTGCTCACGGAGATCACACGTGCACGCGGCGACTGCAT TGCACGGGTGAGCGATTCGGATGGCGAGTTCCTGCTCATCGAGGCGGCGG ACGCCCTGCCCGACTGGGCGTCTCCGGAAACGTGCGAGCAGCGCGTTTAT CTGGTCGGTGGTCACCTGCAGCTTCTCCAGAACTCCGCCGCCAGCAGCCA GGACAAGCCACTGACCATGGCCATGGCTGTGCAACGTATACGAATGAATC CCACCCTGTACCGCTGCTCGCAGGAGATACAGTCGTGCATTGACGCGCGG CTTAAGGAGTACCAGATCGCTCAGCCGCACTTCTCCATTCATCGCCAGGT GCTGGAGCTCCCGCATAGCGCTGCACAGCTTCTGAAACAGAAGCCAAGGC TGCTCTCCTCGGCGGTTAGGGCTTTCTGCGAGCGGGACTCGCTGGACATC AAGGCACTTCGCACCATGCGATATTTCCCACCGGAGGCCACACGCGTGCG CACCAACGTGCGTTTCACCCGCTGTCTGTACGCCATGTTGTCGCACCAGC AGTATCTGCCCGAGAAGAGACTCGGCTGGCATCTCACGGATCCTGTATCC GAGCCGGAACGATATAAGGAACAACTATTGGGCTTGAAGCTGGCCAGTGG ACTGGAGATCCTGGCCACTCAAGCCAAGCGGGTTGAGGGCCAACAGCTGG AGGACCTTCCTGCCTGGCGATCGTATCTGCGGAGCTTGCTGAGCAAGGGC TACTTCCGGGACAACATCGAGGGCAGTGCCGAGTACCAGGAGCTGCTGAA CAAGGCCAAGGTGTACTTTCGTGGCAACCAGGAGCGTTTCCGCACAGCCT CCAGAGCGGGTGCCGAGATCCTCGACCTGTTGCTCCATCCAGCGGAGGCT GCTTCCGAGGAGCTGCGCGATGAGGAGAACAACCTGCAGCCCAGCGACTC GGATGAGTGGTTGAATATCAGCGCTGAGGATCTAGACTCCATGCTGCAGG ATCGCTACGGACCCAAGAAGCTCTACAAGCCGAACGGACAAATGAATGCC GAGGAGTTCACCAAGCAGCTGGCGGAGTTCTTAGATCGGCAGTCCAACTA CGAGGGCATTGAGCACCGAGGGCTCGAGGAGCCAGAACTGGACTCAGACG ATGACGAGCCGCCGCCGCAGGCAAACGGTTCCACAGGACTGACAGCAAAG GTCAAGAAGAATCCCTCCATGCGCAAGGCGTGCCAGCGCAATTCCGTCAT CCAGCCGGAGGAACCGGACAGCACCCATGTGCGGAATTTCCTGGATTTCG TAATACCCGAGGACAACTGGGACTCCACCTCGGAGATGAGCGACTACGCG GACGAGGACGACATGGAGAGTAATCTAAATGCACTTTCTGGAGGCGGCAG TGTGTTCCCACTCGATCGACAGATTCAATCGTATATGGAGCAGATGGACC GCGAGTTGGCTCAGACCAGCGTGGGCAAGTCCTTCCACGGCAAGAAGAAG ACAGCTCCACAGGCGGACGAGGACGATTTCGATGACATTGAGGACTTTGA GCCCATCAATATAAACGTAAACACGCTGCGCAACATGATGGATAGCTACC AATCGCAGGTTGGCGGCGCAGGTCCTGTATCCAATCTGTTTAGCGCCATG GGCGTGGGCATGTCGGCTGTCGAGGACAAGGAACAAAAGGATATATCTGA GTCGGCCGTTTAAGCGGGATTACAGGAATTAGTATAGTCTTAAGTCCATT AAATAAACGTCAATGTGAATATTTCAATGTAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 2262983..2264824 | 289..2130 | 99 | <- | Minus |
chr3L | 2264898..2265185 | 1..288 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ecd-RA | 1..2055 | 9..2063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ecd-RA | 1..2055 | 9..2063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ecd-RA | 1..2055 | 9..2063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ecd-RA | 1..2055 | 9..2063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ecd-RA | 1..2055 | 9..2063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ecd-RA | 29..2158 | 1..2130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ecd-RA | 29..2158 | 1..2130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ecd-RA | 75..2204 | 1..2130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ecd-RA | 29..2158 | 1..2130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ecd-RA | 75..2204 | 1..2130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2265496..2265783 | 1..288 | 100 | Minus | |
3L | 2263581..2265422 | 289..2130 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2265496..2265783 | 1..288 | 100 | Minus | |
3L | 2263581..2265422 | 289..2130 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2265496..2265783 | 1..288 | 100 | Minus | |
3L | 2263581..2265422 | 289..2130 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 2265496..2265783 | 1..288 | 100 | Minus | |
arm_3L | 2263581..2265422 | 289..2130 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2263581..2265422 | 289..2130 | 100 | <- | Minus |
3L | 2265496..2265783 | 1..288 | 100 | Minus |
Translation from 2 to 2062
> GH14368.hyp QRMSKIPGSNLEFVREEDFVEYYIFPKIPDNVQDEGALRKLMLQIRNEIS AIVREKSLERSYLWHKDEFQLQVRLGGAEERLLNEETNPEEEAELGDLPP HFHGVTHYGDNISDEWFVVYLLTEITRARGDCIARVSDSDGEFLLIEAAD ALPDWASPETCEQRVYLVGGHLQLLQNSAASSQDKPLTMAMAVQRIRMNP TLYRCSQEIQSCIDARLKEYQIAQPHFSIHRQVLELPHSAAQLLKQKPRL LSSAVRAFCERDSLDIKALRTMRYFPPEATRVRTNVRFTRCLYAMLSHQQ YLPEKRLGWHLTDPVSEPERYKEQLLGLKLASGLEILATQAKRVEGQQLE DLPAWRSYLRSLLSKGYFRDNIEGSAEYQELLNKAKVYFRGNQERFRTAS RAGAEILDLLLHPAEAASEELRDEENNLQPSDSDEWLNISAEDLDSMLQD RYGPKKLYKPNGQMNAEEFTKQLAEFLDRQSNYEGIEHRGLEEPELDSDD DEPPPQANGSTGLTAKVKKNPSMRKACQRNSVIQPEEPDSTHVRNFLDFV IPEDNWDSTSEMSDYADEDDMESNLNALSGGGSVFPLDRQIQSYMEQMDR ELAQTSVGKSFHGKKKTAPQADEDDFDDIEDFEPININVNTLRNMMDSYQ SQVGGAGPVSNLFSAMGVGMSAVEDKEQKDISESAV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ecd-PA | 684 | CG5714-PA | 1..684 | 3..686 | 3549 | 100 | Plus |
Translation from 8 to 2062
> GH14368.pep MSKIPGSNLEFVREEDFVEYYIFPKIPDNVQDEGALRKLMLQIRNEISAI VREKSLERSYLWHKDEFQLQVRLGGAEERLLNEETNPEEEAELGDLPPHF HGVTHYGDNISDEWFVVYLLTEITRARGDCIARVSDSDGEFLLIEAADAL PDWASPETCEQRVYLVGGHLQLLQNSAASSQDKPLTMAMAVQRIRMNPTL YRCSQEIQSCIDARLKEYQIAQPHFSIHRQVLELPHSAAQLLKQKPRLLS SAVRAFCERDSLDIKALRTMRYFPPEATRVRTNVRFTRCLYAMLSHQQYL PEKRLGWHLTDPVSEPERYKEQLLGLKLASGLEILATQAKRVEGQQLEDL PAWRSYLRSLLSKGYFRDNIEGSAEYQELLNKAKVYFRGNQERFRTASRA GAEILDLLLHPAEAASEELRDEENNLQPSDSDEWLNISAEDLDSMLQDRY GPKKLYKPNGQMNAEEFTKQLAEFLDRQSNYEGIEHRGLEEPELDSDDDE PPPQANGSTGLTAKVKKNPSMRKACQRNSVIQPEEPDSTHVRNFLDFVIP EDNWDSTSEMSDYADEDDMESNLNALSGGGSVFPLDRQIQSYMEQMDREL AQTSVGKSFHGKKKTAPQADEDDFDDIEDFEPININVNTLRNMMDSYQSQ VGGAGPVSNLFSAMGVGMSAVEDKEQKDISESAV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24872-PA | 685 | GF24872-PA | 1..685 | 1..684 | 2844 | 80.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14523-PA | 685 | GG14523-PA | 1..685 | 1..684 | 3421 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16480-PA | 709 | GH16480-PA | 1..709 | 1..684 | 2374 | 66.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ecd-PA | 684 | CG5714-PA | 1..684 | 1..684 | 3549 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12151-PA | 699 | GI12151-PA | 1..699 | 1..684 | 2472 | 69.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24621-PA | 611 | GL24621-PA | 15..415 | 5..407 | 1484 | 66.5 | Plus |
Dper\GL24621-PA | 611 | GL24621-PA | 372..611 | 453..684 | 709 | 66.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19078-PA | 699 | GA19078-PA | 15..699 | 5..684 | 2538 | 69.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14128-PA | 684 | GM14128-PA | 1..684 | 1..684 | 3587 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13400-PA | 240 | GD13400-PA | 1..240 | 445..684 | 1257 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13431-PA | 718 | GJ13431-PA | 1..718 | 1..684 | 2473 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12519-PA | 710 | GK12519-PA | 4..710 | 2..684 | 2383 | 66.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21715-PA | 683 | GE21715-PA | 1..683 | 1..684 | 3430 | 95.6 | Plus |