Clone GH14384 Report

Search the DGRC for GH14384

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:143
Well:84
Vector:pOT2
Associated Gene/Transcriptslmo-RA
Protein status:GH14384.pep: gold
Preliminary Size:1246
Sequenced Size:1261

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9131 2001-01-01 Release 2 assignment
CG9131 2001-07-04 Blastp of sequenced clone
CG9131 2003-01-01 Sim4 clustering to Release 3
slmo 2008-04-29 Release 5.5 accounting
slmo 2008-08-15 Release 5.9 accounting
CG34179 2008-08-15 Release 5.9 accounting
slmo 2008-12-18 5.12 accounting
CG34179 2008-12-18 5.12 accounting

Clone Sequence Records

GH14384.complete Sequence

1261 bp (1261 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051484

> GH14384.complete
CTCTCGTAACTTGTCTCGGAAATATTCAATAATTCCGAGATTGCCGTCAA
AATTCGAGTCGTGTACTTCAGCTAACGCTCCCCCTGTTTAATTCCGTTCC
GTCTGCCCCCGCAGGCTCAGCTCAGCCCGCATCTCGGCTGCCAATTAAGG
ATATAAAGCCCTCCCCGGACGGTGACGACAACGGCGCTTGCATAATGAAA
ATCTGGACATCGGAGCACATATTCAACCACCCGTGGGAGACGGTCACGCA
GGCGGCGTGGCGCAAGTACCCCAATCCGATGACGCCCTCCATCATTGGCA
CGGACGTGGTCGAGCGCCGTGTGGTGGACGGCGTCCTGCACACGCATCGC
CTGGTGCAGTCCAAGTGGTACTTCCCCAAGTGGACGCACGCGCTGATCGG
CACGGCCAAAACTTGTTTCGCCAGCGAACGCTCCACGGTGGACCCGGAGC
GCAAACAGATGGTGCTGAAGACAAACAACCTCACCTTCTGCCGCAACATC
AGCGTGGACGAGGTGCTCTACTATGAGCCGCATCCGTCGGATGCCAGCAA
GACGCTGCTCAAGCAGGAGGCCACCGTGACCGTCTTTGGTGTGCCGCTGT
CCCACTACATGGAGGACCTGCTCACCTCGACCATTAGCACAAATGCCGGC
AAGGGACGCCAGGGCCTGGAGTGGGTGATCGGGCTGATCAACACGGAGGT
CAAGGGCATCGCTCGCGGCACCGACGAACTTCTGCACAACACACGGCGCT
CCATCGACGAGGTGACGGAGAGCGCGCGGAAGAGCATGGACGAGATCAGT
GCGCAGGCCGCCAAGGCGGCGAAGGCGATGCACATTACGTAGGTGTCGAC
AAGGCGACAGTGCAAGGTCGCGCGGGGGCTGTTCACTAGTGAATTATTTA
GATGGCGCGCGGTCGTCGTTTTAGTACAACTAATTAATCGATGGCACGAT
GGACATGGACAGCAACATGTGGGACAGCAACACCTTCCTCTATTCTCAAG
CCATTCAATGCATATATTTTATAATTATTACTCCCCTTCGAACGAATCGA
CTGCTAATGAGTCATGTCGATAAAGAAGTGCCCCCGAATGGCTGAACTGG
AAGGAACTCGCGCTAATGCTGGCCCCCATTCATGCAGATCAATATATATA
TAAACCTAAAGTACATAGTCAATGTAAGCTTTGTAAGCCGCCGCAGATTT
CGAAGAACGAGAGGAGCAATTAAACGACATATTTGCCTACGAAAAAAAAA
AAAAAAAAAAA

GH14384.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:36:04
Subject Length Description Subject Range Query Range Score Percent Strand
slmo-RD 2053 slmo-RD 809..2050 1..1242 6210 100 Plus
CG34179-RB 2053 CG34179-RB 809..2050 1..1242 6210 100 Plus
slmo-RA 1288 slmo-RA 48..1288 1..1241 6205 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:55:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 6045705..6046945 1241..1 6205 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:51:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:55:49
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6046653..6047894 1242..1 6210 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:57:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6046653..6047894 1242..1 6210 100 Minus
Blast to na_te.dros performed on 2019-03-16 07:55:49 has no hits.

GH14384.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:56:39 Download gff for GH14384.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 6045705..6046945 1..1241 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:42:28 Download gff for GH14384.complete
Subject Subject Range Query Range Percent Splice Strand
slmo-RC 1..648 195..842 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:26:40 Download gff for GH14384.complete
Subject Subject Range Query Range Percent Splice Strand
slmo-RC 1..648 195..842 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:12:05 Download gff for GH14384.complete
Subject Subject Range Query Range Percent Splice Strand
slmo-RC 1..648 195..842 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:59:49 Download gff for GH14384.complete
Subject Subject Range Query Range Percent Splice Strand
slmo-RC 1..648 195..842 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:45:34 Download gff for GH14384.complete
Subject Subject Range Query Range Percent Splice Strand
slmo-RC 1..648 195..842 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:25:44 Download gff for GH14384.complete
Subject Subject Range Query Range Percent Splice Strand
CG34179-RB 809..2049 1..1241 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:26:40 Download gff for GH14384.complete
Subject Subject Range Query Range Percent Splice Strand
slmo-RD 809..2049 1..1241 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:12:05 Download gff for GH14384.complete
Subject Subject Range Query Range Percent Splice Strand
slmo-RA 41..1281 1..1241 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:59:49 Download gff for GH14384.complete
Subject Subject Range Query Range Percent Splice Strand
CG34179-RB 809..2049 1..1241 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:45:34 Download gff for GH14384.complete
Subject Subject Range Query Range Percent Splice Strand
slmo-RA 41..1281 1..1241 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:56:39 Download gff for GH14384.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6046654..6047894 1..1241 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:56:39 Download gff for GH14384.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6046654..6047894 1..1241 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:56:39 Download gff for GH14384.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6046654..6047894 1..1241 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:12:05 Download gff for GH14384.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6046654..6047894 1..1241 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:37:39 Download gff for GH14384.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6046654..6047894 1..1241 100   Minus

GH14384.hyp Sequence

Translation from 194 to 841

> GH14384.hyp
MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHT
HRLVQSKWYFPKWTHALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCR
NISVDEVLYYEPHPSDASKTLLKQEATVTVFGVPLSHYMEDLLTSTISTN
AGKGRQGLEWVIGLINTEVKGIARGTDELLHNTRRSIDEVTESARKSMDE
ISAQAAKAAKAMHIT*

GH14384.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:52:19
Subject Length Description Subject Range Query Range Score Percent Strand
slmo-PE 215 CG9131-PE 1..215 1..215 1130 100 Plus
slmo-PD 215 CG9131-PD 1..215 1..215 1130 100 Plus
slmo-PC 215 CG9131-PC 1..215 1..215 1130 100 Plus
slmo-PB 215 CG9131-PB 1..215 1..215 1130 100 Plus
slmo-PA 215 CG9131-PA 1..215 1..215 1130 100 Plus

GH14384.pep Sequence

Translation from 194 to 841

> GH14384.pep
MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHT
HRLVQSKWYFPKWTHALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCR
NISVDEVLYYEPHPSDASKTLLKQEATVTVFGVPLSHYMEDLLTSTISTN
AGKGRQGLEWVIGLINTEVKGIARGTDELLHNTRRSIDEVTESARKSMDE
ISAQAAKAAKAMHIT*

GH14384.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:56:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15409-PA 222 GF15409-PA 1..215 1..215 1128 96.3 Plus
Dana\GF12463-PA 236 GF12463-PA 10..163 6..162 172 26.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:56:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10142-PA 215 GG10142-PA 1..215 1..215 1151 99.5 Plus
Dere\GG24072-PA 236 GG24072-PA 10..163 6..162 177 26.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:56:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10939-PA 219 GH10939-PA 1..219 1..215 1038 91.8 Plus
Dgri\GH23146-PA 231 GH23146-PA 10..163 6..162 173 26.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:13
Subject Length Description Subject Range Query Range Score Percent Strand
slmo-PE 215 CG9131-PE 1..215 1..215 1130 100 Plus
slmo-PD 215 CG9131-PD 1..215 1..215 1130 100 Plus
slmo-PC 215 CG9131-PC 1..215 1..215 1130 100 Plus
slmo-PB 215 CG9131-PB 1..215 1..215 1130 100 Plus
slmo-PA 215 CG9131-PA 1..215 1..215 1130 100 Plus
prel-PB 236 CG8806-PB 10..163 6..162 173 26.1 Plus
prel-PC 236 CG8806-PC 10..163 6..162 173 26.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:56:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13532-PA 219 GI13532-PA 1..219 1..215 1051 93.2 Plus
Dmoj\GI18483-PA 238 GI18483-PA 10..163 6..162 169 26.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:56:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19083-PA 219 GL19083-PA 1..219 1..215 1073 91.3 Plus
Dper\GL11074-PA 236 GL11074-PA 8..163 4..162 181 25.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:56:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21566-PA 219 GA21566-PA 1..219 1..215 1073 91.3 Plus
Dpse\GA21334-PA 236 GA21334-PA 8..163 4..162 181 25.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:56:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17966-PA 215 GM17966-PA 1..215 1..215 1155 100 Plus
Dsec\GM21121-PA 236 GM21121-PA 10..163 6..162 177 26.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:56:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22604-PA 215 GD22604-PA 1..215 1..215 1155 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:56:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12173-PA 219 GJ12173-PA 1..219 1..215 1054 93.6 Plus
Dvir\GJ21344-PA 231 GJ21344-PA 10..163 6..162 176 26.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:56:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15396-PA 219 GK15396-PA 1..219 1..215 1104 93.6 Plus
Dwil\GK10633-PA 233 GK10633-PA 10..163 6..162 181 26.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:56:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\kisir-PA 215 GE18952-PA 1..215 1..215 1152 99.5 Plus
Dyak\GE19276-PA 236 GE19276-PA 10..163 6..162 178 25.5 Plus