Clone GH14462 Report

Search the DGRC for GH14462

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:144
Well:62
Vector:pOT2
Associated Gene/TranscriptCG7834-RA
Protein status:GH14462.pep: gold
Preliminary Size:1211
Sequenced Size:1000

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7834 2001-01-01 Release 2 assignment
CG7834 2002-06-12 Blastp of sequenced clone
CG7834 2003-01-01 Sim4 clustering to Release 3
CG7834 2008-04-29 Release 5.5 accounting
CG7834 2008-08-15 Release 5.9 accounting
CG7834 2008-12-18 5.12 accounting

Clone Sequence Records

GH14462.complete Sequence

1000 bp (1000 high quality bases) assembled on 2002-06-12

GenBank Submission: AY122112

> GH14462.complete
GAAAATGGCGCGTGTTTTGGTTGGAGTTAAGCGTGTGATCGACTACGCCG
TCAAGGTGCGCGTCAAGCCCGACAAGACTGGCGTGGTCACCCAGGGCGTG
AAGCACTCGATGAATCCCTTCGACGAGATCGCCGTGGAGGAGGCGGTGAA
GCTGAAGGAGAAAAAGCTGGCCGAGGAGGTGATCGCCGTCTCCGTGGGCC
CGGCCCAGTCGCAGGAGGTGATCCGCACCGCCCTGGCCATGGGCGCCGAT
CGCGGCGTCCACGTAGAGATCCCGGCCGCCGAGTACGAGCTTCTGCAGCC
CATCCACGTGTCGAAGATTCTGGCCAAGTTGGCTCTTGACGAAAAAGCCG
ACCTGGTCATCCTTGGCAAGCAGGCCATCGACGATGATGCCAACCAAACG
GCCCAGATGACCGCCGCCGTGCTCGACTGGCCGCAGGGCACCTTCTGCAA
CAAGATCGAGAAGACAGACGCCGGTCTGACCATCACGCGTGAAATTGATG
GTGGCCTGGAGACAATCAAGACCAAGACCCCGGCTGTGCTGAGCGCCGAT
CTCCGGCTGAACACCCCTCGCTACGCCACGTTGCCGAACATCATGAAGGC
CAAGAAGAAGCCGCTGAAGAAGGTTACGGCCAAGGATCTCGGCGTGGACA
CCTCGCCCCGCATCGAGGTCATCTCCGTGGAGGATCCTCCTGTGCGCCAG
GCCGGCGCCACCGTCGCCGACGTGGATGCCCTGGTGGCCAAGCTAAAGGA
GGGCGGCCACATCTAGATGTTCCTCAACTAGAAAATTGTGAGCGCATATT
CTACGTTTTTAATTAGTCGAAAGTTATCAGAAACGTGCATTTATCTAGCC
GGAGAGTCGGATTTGCTGACAGGCTTTAAATTTCTCTGAATTCAACCCAT
ACCCGTGTGCTTTAAGTGAACTATAAATTGGAATTTATTCTCGTTGTGTC
CAGCTCTAAGAATAAAGTGATTGTAAGCTCTGAAAAAAAAAAAAAAAAAA

GH14462.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:48:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG7834-RB 1081 CG7834-RB 2..986 1..985 4925 100 Plus
CG7834-RA 1186 CG7834-RA 82..1066 1..985 4925 100 Plus
CG7834.a 1125 CG7834.a 82..868 1..787 3935 100 Plus
CG7834.a 1125 CG7834.a 869..1005 849..985 685 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:14:35
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 25624288..25625220 982..50 4605 99.6 Minus
chr3R 27901430 chr3R 25625334..25625399 66..1 300 97 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:51:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:14:33
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29801730..29802665 985..50 4665 99.9 Minus
3R 32079331 3R 29802787..29802844 58..1 290 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:21:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 29542561..29543496 985..50 4665 99.8 Minus
3R 31820162 3R 29543618..29543675 58..1 290 100 Minus
Blast to na_te.dros performed on 2019-03-16 10:14:34 has no hits.

GH14462.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:15:38 Download gff for GH14462.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 25624288..25625214 56..982 99 <- Minus
chr3R 25625345..25625399 1..55 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:42:42 Download gff for GH14462.complete
Subject Subject Range Query Range Percent Splice Strand
CG7834-RB 1..762 5..766 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:23:37 Download gff for GH14462.complete
Subject Subject Range Query Range Percent Splice Strand
CG7834-RB 1..762 5..766 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:58:22 Download gff for GH14462.complete
Subject Subject Range Query Range Percent Splice Strand
CG7834-RA 1..762 5..766 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:14:17 Download gff for GH14462.complete
Subject Subject Range Query Range Percent Splice Strand
CG7834-RB 1..762 5..766 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:01:24 Download gff for GH14462.complete
Subject Subject Range Query Range Percent Splice Strand
CG7834-RA 1..762 5..766 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:50:46 Download gff for GH14462.complete
Subject Subject Range Query Range Percent Splice Strand
CG7834-RB 1..982 1..982 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:23:37 Download gff for GH14462.complete
Subject Subject Range Query Range Percent Splice Strand
CG7834-RB 1..982 1..982 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:58:22 Download gff for GH14462.complete
Subject Subject Range Query Range Percent Splice Strand
CG7834-RA 40..1021 1..982 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:14:18 Download gff for GH14462.complete
Subject Subject Range Query Range Percent Splice Strand
CG7834-RB 1..982 1..982 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:01:24 Download gff for GH14462.complete
Subject Subject Range Query Range Percent Splice Strand
CG7834-RA 40..1021 1..982 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:15:38 Download gff for GH14462.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29801733..29802659 56..982 100 <- Minus
3R 29802790..29802844 1..55 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:15:38 Download gff for GH14462.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29801733..29802659 56..982 100 <- Minus
3R 29802790..29802844 1..55 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:15:38 Download gff for GH14462.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29801733..29802659 56..982 100 <- Minus
3R 29802790..29802844 1..55 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:58:22 Download gff for GH14462.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25627455..25628381 56..982 100 <- Minus
arm_3R 25628512..25628566 1..55 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:47:13 Download gff for GH14462.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29542564..29543490 56..982 100 <- Minus
3R 29543621..29543675 1..55 100   Minus

GH14462.hyp Sequence

Translation from 1 to 765

> GH14462.hyp
KMARVLVGVKRVIDYAVKVRVKPDKTGVVTQGVKHSMNPFDEIAVEEAVK
LKEKKLAEEVIAVSVGPAQSQEVIRTALAMGADRGVHVEIPAAEYELLQP
IHVSKILAKLALDEKADLVILGKQAIDDDANQTAQMTAAVLDWPQGTFCN
KIEKTDAGLTITREIDGGLETIKTKTPAVLSADLRLNTPRYATLPNIMKA
KKKPLKKVTAKDLGVDTSPRIEVISVEDPPVRQAGATVADVDALVAKLKE
GGHI*

GH14462.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:53:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG7834-PB 253 CG7834-PB 1..253 2..254 1252 100 Plus
CG7834-PA 253 CG7834-PA 1..253 2..254 1252 100 Plus

GH14462.pep Sequence

Translation from 4 to 765

> GH14462.pep
MARVLVGVKRVIDYAVKVRVKPDKTGVVTQGVKHSMNPFDEIAVEEAVKL
KEKKLAEEVIAVSVGPAQSQEVIRTALAMGADRGVHVEIPAAEYELLQPI
HVSKILAKLALDEKADLVILGKQAIDDDANQTAQMTAAVLDWPQGTFCNK
IEKTDAGLTITREIDGGLETIKTKTPAVLSADLRLNTPRYATLPNIMKAK
KKPLKKVTAKDLGVDTSPRIEVISVEDPPVRQAGATVADVDALVAKLKEG
GHI*

GH14462.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:31:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16327-PA 253 GF16327-PA 1..253 1..253 1271 97.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:31:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12001-PA 253 GG12001-PA 1..253 1..253 1291 99.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 05:31:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20899-PA 253 GH20899-PA 1..253 1..253 1128 93.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:32:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG7834-PB 253 CG7834-PB 1..253 1..253 1252 100 Plus
CG7834-PA 253 CG7834-PA 1..253 1..253 1252 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 05:31:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10719-PA 253 GI10719-PA 1..253 1..253 1180 94.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 05:31:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24008-PA 253 GL24008-PA 1..253 1..253 1201 95.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 05:31:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20618-PA 253 GA20618-PA 1..253 1..253 1204 96 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:31:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12220-PA 253 GM12220-PA 1..253 1..253 1294 100 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 05:31:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17660-PA 253 GD17660-PA 1..253 1..253 1294 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 05:31:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23135-PA 253 GJ23135-PA 1..253 1..253 1127 94.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 05:31:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11162-PA 253 GK11162-PA 1..252 1..252 1260 97.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:31:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10427-PA 253 GE10427-PA 1..253 1..253 1291 99.6 Plus