Clone GH14572 Report

Search the DGRC for GH14572

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:145
Well:72
Vector:pOT2
Associated Gene/TranscriptCG11395-RA
Protein status:GH14572.pep: gold
Preliminary Size:1487
Sequenced Size:1517

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11395 2001-01-01 Release 2 assignment
CG11395 2001-07-04 Blastp of sequenced clone
CG11395 2003-01-01 Sim4 clustering to Release 3
CG11395 2008-04-29 Release 5.5 accounting
CG11395 2008-08-15 Release 5.9 accounting
CG11395 2008-12-18 5.12 accounting

Clone Sequence Records

GH14572.complete Sequence

1517 bp (1517 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051489

> GH14572.complete
ATTCAACGCTGCCGTTGGGTCGATTTCGTGTCGAAAATGTTTTTGCAACT
CTTATCTATAAGGTTGGCTATGTCACTGATCCTTTTAATCAGTGGACAAT
GGACTTCAGCTCGTCCCCAGAATCCTTACTACGTGGAAAACGGCGGACAT
GGATATCCGAACCATCATCGCCACCATGGTCATCACGTACATGGGTCAGG
ATATGGCCCAGGATCCATTGGACCACCTCCCTTTGTCTTCGGTCGTTTTC
CACCGCCTCCTTCGTATTATCCAGATAATCAACCATCAGGAGGTCGTCAA
CCGTATTATCCGAACGTCGGTGCAGTTCAAGGACAACCTGGCAGTCAATT
TCACCAACATGGAGGTGGTTTTCATAGAGGACAACAGGAATATCCCTACC
CTGTAGGTGATTTTAACAGGGGACATCCAGGCCTCCAGCAACCGGGTGGA
GATTTCAACAGGGGCCAACCAGGTTTTCAGCAGCCAGGAAATGAATTCAA
TAGACCACAACCATCTGGAAGGGCGCCAGGACATCAACAATCTGGCAGCC
ATGAGGAGCTACCCACCTACCCTCGAGGATTGGAACCCCAGCAGCCGGGT
GGTGATCCAAATACCCTACAGCCTCGACCTGGCCAAAACCCTGGTGGATT
CGAACAGCCAAATGAAAATGCTGGCGGATTCCAACAGTCAGGCCAAAATA
ATGGGGGGTTCCGGCAACCAAGCCAAAATTCTGGAGGATTCCAACAGCCA
GGCCAGAGTACTGGAGGATTCCAGCAACCAGGCCAGAGTTCTGGGGGATT
CCAACAGCCAGGCCAGAGTACTGGGGGATTCCAACAGCCAGGCCAGAGTA
CTGGAGGATTCCAACAGCCAGGCCAGAGTACTGGAGGATTCCGGCAGCCA
GACCAGAGTTCTGGAGGATTCCAACAACCAGACCAGAATTCTGGAGAGTT
TCAACAACCAGGTCTAAACCAGGGACGGAAACCTGGTACTTCTAATAATT
CCATACAACCGCGTCCCGGAAGCGCAGATGAAGACTTTTCCGACTTCAAT
TTCCAGTCCCCCAAGACTTTGCAGCCTCGACCCGGCCAGGATTACGAAAC
TGCGGGATCTGGCGGAGCGCAGACAATTCAACCGATTCCCGGGCATCCGC
AGTCTTCTGTGATCCAACCTATTCCAGGGCGAGCTCAATCTTCTGACAAT
GTTGACCAAAACATCAACGACCTCTTCAACACCCATGATTTTCTGTCACC
AGAATTGAGCACAGCGCCTGGAGCCAACCGAGATCCCAAGTCGGATGCTG
AGGAAGCAAGTCCAGAGTCGGTAAATCAGCGCAGTCTCTTCAACCTGGAT
CCCAAGTGTGCAGAAGGACTCAAGCTCATGGCAGGACGTTGCAGGAAGGA
AGCCTAGGGAATTCGGATTCAAATGAAATTCTGATTAATACTGTTTCATG
TTCACAATACATATTTCATTGTGTCATTAAATCTGTCATTATGTGTAATA
AAAAAAAAAAAAAAAAA

GH14572.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:36:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG11395-RA 1863 CG11395-RA 126..1626 1..1501 7505 100 Plus
CG11395.a 1455 CG11395.a 16..901 1..886 4295 98.9 Plus
CG11395.b 1425 CG11395.b 16..887 1..872 4105 98 Plus
CG11395.a 1455 CG11395.a 680..1455 725..1500 3610 97.6 Plus
CG11395.b 1425 CG11395.b 686..1425 761..1500 3445 97.7 Plus
CG11395.b 1425 CG11395.b 680..886 725..931 660 87.9 Plus
CG11395.a 1455 CG11395.a 656..916 671..931 630 82.7 Plus
CG11395.a 1455 CG11395.a 740..917 665..842 500 85.3 Plus
CG11395.b 1425 CG11395.b 656..871 671..886 480 81.4 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:57:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 13024699..13026037 161..1499 6380 98.4 Plus
chr2R 21145070 chr2R 13025209..13025499 641..931 840 85.9 Plus
chr2R 21145070 chr2R 13025179..13025469 671..961 780 84.5 Plus
chr2R 21145070 chr2R 13024461..13024616 1..156 735 98.1 Plus
chr2R 21145070 chr2R 13025203..13025424 725..946 735 88.7 Plus
chr2R 21145070 chr2R 13025263..13025484 665..886 705 87.8 Plus
chr2R 21145070 chr2R 13025170..13025410 722..962 560 82.2 Plus
chr2R 21145070 chr2R 13025299..13025500 671..872 500 83.2 Plus
chr2R 21145070 chr2R 13025329..13025500 671..842 500 86 Plus
chr2R 21145070 chr2R 13025209..13025380 791..962 455 84.3 Plus
chr2R 21145070 chr2R 13025179..13025350 791..962 350 80.2 Plus
chr2R 21145070 chr2R 13025329..13025500 641..812 305 78.5 Plus
chr2R 21145070 chr2R 13025179..13025320 821..962 290 80.3 Plus
chr2R 21145070 chr2R 13025359..13025500 641..782 290 80.3 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:52:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:57:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17137491..17138833 159..1501 6715 100 Plus
2R 25286936 2R 17137256..17137414 1..159 795 100 Plus
2R 25286936 2R 17137973..17138263 671..961 765 84.2 Plus
2R 25286936 2R 17138003..17138293 641..931 765 84.2 Plus
2R 25286936 2R 17137997..17138218 725..946 705 87.8 Plus
2R 25286936 2R 17138057..17138278 665..886 705 87.8 Plus
2R 25286936 2R 17137964..17138204 722..962 530 81.3 Plus
2R 25286936 2R 17138054..17138294 632..872 530 81.3 Plus
2R 25286936 2R 17138003..17138174 791..962 470 84.9 Plus
2R 25286936 2R 17138123..17138294 671..842 470 84.9 Plus
2R 25286936 2R 17138123..17138294 641..812 335 79.7 Plus
2R 25286936 2R 17137973..17138144 791..962 335 79.7 Plus
2R 25286936 2R 17137973..17138114 821..962 275 79.6 Plus
2R 25286936 2R 17138153..17138294 641..782 275 79.6 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:57:46
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 17138690..17140032 159..1501 6715 100 Plus
2R 25260384 2R 17138455..17138613 1..159 795 100 Plus
Blast to na_te.dros performed on 2019-03-16 02:57:38 has no hits.

GH14572.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:58:15 Download gff for GH14572.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 13024461..13024618 1..158 97 -> Plus
chr2R 13024697..13026037 159..1499 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:42:55 Download gff for GH14572.complete
Subject Subject Range Query Range Percent Splice Strand
CG11395-RA 1..1371 37..1407 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:26:45 Download gff for GH14572.complete
Subject Subject Range Query Range Percent Splice Strand
CG11395-RA 1..1371 37..1407 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:25:01 Download gff for GH14572.complete
Subject Subject Range Query Range Percent Splice Strand
CG11395-RA 1..1371 37..1407 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:59:54 Download gff for GH14572.complete
Subject Subject Range Query Range Percent Splice Strand
CG11395-RA 1..1371 37..1407 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:26:49 Download gff for GH14572.complete
Subject Subject Range Query Range Percent Splice Strand
CG11395-RA 1..1371 37..1407 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:25:52 Download gff for GH14572.complete
Subject Subject Range Query Range Percent Splice Strand
CG11395-RA 16..1514 1..1499 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:26:45 Download gff for GH14572.complete
Subject Subject Range Query Range Percent Splice Strand
CG11395-RA 16..1514 1..1499 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:25:01 Download gff for GH14572.complete
Subject Subject Range Query Range Percent Splice Strand
CG11395-RA 17..1515 1..1499 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:59:54 Download gff for GH14572.complete
Subject Subject Range Query Range Percent Splice Strand
CG11395-RA 16..1514 1..1499 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:26:49 Download gff for GH14572.complete
Subject Subject Range Query Range Percent Splice Strand
CG11395-RA 17..1515 1..1499 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:58:15 Download gff for GH14572.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17137256..17137413 1..158 100 -> Plus
2R 17137491..17138831 159..1499 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:58:15 Download gff for GH14572.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17137256..17137413 1..158 100 -> Plus
2R 17137491..17138831 159..1499 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:58:15 Download gff for GH14572.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17137256..17137413 1..158 100 -> Plus
2R 17137491..17138831 159..1499 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:25:01 Download gff for GH14572.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13024761..13024918 1..158 100 -> Plus
arm_2R 13024996..13026336 159..1499 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:37:46 Download gff for GH14572.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17138690..17140030 159..1499 100   Plus
2R 17138455..17138612 1..158 100 -> Plus

GH14572.hyp Sequence

Translation from 1 to 1406

> GH14572.hyp
IQRCRWVDFVSKMFLQLLSIRLAMSLILLISGQWTSARPQNPYYVENGGH
GYPNHHRHHGHHVHGSGYGPGSIGPPPFVFGRFPPPPSYYPDNQPSGGRQ
PYYPNVGAVQGQPGSQFHQHGGGFHRGQQEYPYPVGDFNRGHPGLQQPGG
DFNRGQPGFQQPGNEFNRPQPSGRAPGHQQSGSHEELPTYPRGLEPQQPG
GDPNTLQPRPGQNPGGFEQPNENAGGFQQSGQNNGGFRQPSQNSGGFQQP
GQSTGGFQQPGQSSGGFQQPGQSTGGFQQPGQSTGGFQQPGQSTGGFRQP
DQSSGGFQQPDQNSGEFQQPGLNQGRKPGTSNNSIQPRPGSADEDFSDFN
FQSPKTLQPRPGQDYETAGSGGAQTIQPIPGHPQSSVIQPIPGRAQSSDN
VDQNINDLFNTHDFLSPELSTAPGANRDPKSDAEEASPESVNQRSLFNLD
PKCAEGLKLMAGRCRKEA*

GH14572.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 07:54:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG11395-PB 456 CG11395-PB 1..456 13..468 2536 100 Plus
CG11395-PA 456 CG11395-PA 1..456 13..468 2536 100 Plus
Tequila-PF 2379 CG4821-PF 1023..1329 25..347 292 28.2 Plus
Tequila-PG 2792 CG4821-PG 1023..1329 25..347 292 28.2 Plus
Tequila-PF 2379 CG4821-PF 1005..1223 179..388 273 31.9 Plus
Tequila-PG 2792 CG4821-PG 1005..1223 179..388 273 31.9 Plus
AGO2-PB 1214 CG7439-PB 46..326 87..344 246 34.6 Plus

GH14572.pep Sequence

Translation from 36 to 1406

> GH14572.pep
MFLQLLSIRLAMSLILLISGQWTSARPQNPYYVENGGHGYPNHHRHHGHH
VHGSGYGPGSIGPPPFVFGRFPPPPSYYPDNQPSGGRQPYYPNVGAVQGQ
PGSQFHQHGGGFHRGQQEYPYPVGDFNRGHPGLQQPGGDFNRGQPGFQQP
GNEFNRPQPSGRAPGHQQSGSHEELPTYPRGLEPQQPGGDPNTLQPRPGQ
NPGGFEQPNENAGGFQQSGQNNGGFRQPSQNSGGFQQPGQSTGGFQQPGQ
SSGGFQQPGQSTGGFQQPGQSTGGFQQPGQSTGGFRQPDQSSGGFQQPDQ
NSGEFQQPGLNQGRKPGTSNNSIQPRPGSADEDFSDFNFQSPKTLQPRPG
QDYETAGSGGAQTIQPIPGHPQSSVIQPIPGRAQSSDNVDQNINDLFNTH
DFLSPELSTAPGANRDPKSDAEEASPESVNQRSLFNLDPKCAEGLKLMAG
RCRKEA*

GH14572.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:57:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11446-PA 448 GF11446-PA 1..448 16..456 446 38.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:57:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20667-PA 482 GG20667-PA 1..482 1..456 1566 77.8 Plus
Dere\GG14372-PA 2778 GG14372-PA 1074..1282 77..308 188 32.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:17:00
Subject Length Description Subject Range Query Range Score Percent Strand
Gbp2-PB 456 CG11395-PB 1..456 1..456 2536 100 Plus
Gbp2-PA 456 CG11395-PA 1..456 1..456 2536 100 Plus
teq-PF 2379 CG4821-PF 1023..1329 13..335 292 28.2 Plus
teq-PG 2792 CG4821-PG 1023..1329 13..335 292 28.2 Plus
teq-PF 2379 CG4821-PF 1005..1223 167..376 273 31.9 Plus
teq-PG 2792 CG4821-PG 1005..1223 167..376 273 31.9 Plus
AGO2-PB 1214 CG7439-PB 46..326 75..332 246 34.6 Plus
AGO2-PC 1217 CG7439-PC 49..329 75..332 246 34.6 Plus
Rbp-PO 1473 CG43073-PO 983..1240 79..349 198 32.1 Plus
Rbp-PK 1748 CG43073-PK 982..1239 79..349 198 32.1 Plus
Rbp-PJ 1763 CG43073-PJ 997..1254 79..349 198 32.1 Plus
Rbp-PG 1817 CG43073-PG 1051..1308 79..349 198 32.1 Plus
Sec24CD-PA 1193 CG10882-PA 196..411 72..320 197 34.6 Plus
Sec24CD-PB 1193 CG10882-PB 196..411 72..320 197 34.6 Plus
Sec24CD-PC 1231 CG10882-PC 196..411 72..320 197 34.6 Plus
Rbp-PL 1487 CG43073-PL 970..1254 79..349 181 30.6 Plus
Rbp-PM 1765 CG43073-PM 972..1256 79..349 181 30.6 Plus
Rbp-PN 1791 CG43073-PN 998..1282 79..349 181 30.6 Plus
Rbp-PI 1799 CG43073-PI 1006..1290 79..349 181 30.6 Plus
Rbp-PF 1844 CG43073-PF 1051..1335 79..349 181 30.6 Plus
CG10555-PB 926 CG10555-PB 519..872 37..370 176 28.1 Plus
CG10555-PA 926 CG10555-PA 519..872 37..370 176 28.1 Plus
AGO2-PB 1214 CG7439-PB 19..257 144..372 175 32.4 Plus
AGO2-PC 1217 CG7439-PC 22..260 144..372 175 32.4 Plus
CG10555-PB 926 CG10555-PB 401..752 27..350 173 25.6 Plus
CG10555-PA 926 CG10555-PA 401..752 27..350 173 25.6 Plus
osa-PE 2555 CG7467-PE 1179..1599 19..417 172 27.7 Plus
osa-PC 2556 CG7467-PC 1180..1600 19..417 172 27.7 Plus
osa-PF 2559 CG7467-PF 1183..1603 19..417 172 27.7 Plus
AGO2-PB 1214 CG7439-PB 18..212 157..313 169 34.7 Plus
AGO2-PC 1217 CG7439-PC 21..215 157..313 169 34.7 Plus
osa-PA 2703 CG7467-PA 1341..1747 24..417 168 27.4 Plus
osa-PB 2716 CG7467-PB 1354..1760 24..417 168 27.4 Plus
osa-PD 2716 CG7467-PD 1354..1760 24..417 168 27.4 Plus
osa-PE 2555 CG7467-PE 258..594 62..391 165 26.2 Plus
osa-PC 2556 CG7467-PC 258..594 62..391 165 26.2 Plus
osa-PF 2559 CG7467-PF 258..594 62..391 165 26.2 Plus
osa-PA 2703 CG7467-PA 258..594 62..391 165 26.2 Plus
osa-PB 2716 CG7467-PB 258..594 62..391 165 26.2 Plus
osa-PD 2716 CG7467-PD 258..594 62..391 165 26.2 Plus
osa-PC 2556 CG7467-PC 614..982 27..376 164 26.3 Plus
osa-PF 2559 CG7467-PF 614..982 27..376 164 26.3 Plus
osa-PA 2703 CG7467-PA 614..982 27..376 164 26.3 Plus
osa-PB 2716 CG7467-PB 614..982 27..376 164 26.3 Plus
osa-PD 2716 CG7467-PD 614..982 27..376 164 26.3 Plus
resilin-PA 620 CG15920-PA 81..370 24..305 164 25.9 Plus
AGO2-PB 1214 CG7439-PB 158..415 28..280 163 28.5 Plus
AGO2-PC 1217 CG7439-PC 161..418 28..280 163 28.5 Plus
Sec24CD-PA 1193 CG10882-PA 202..452 59..310 162 33.3 Plus
Sec24CD-PB 1193 CG10882-PB 202..452 59..310 162 33.3 Plus
Sec24CD-PC 1231 CG10882-PC 202..452 59..310 162 33.3 Plus
resilin-PB 575 CG15920-PB 81..434 24..366 160 25.4 Plus
CG5225-PA 594 CG5225-PA 138..439 37..349 160 24.8 Plus
osa-PE 2555 CG7467-PE 614..981 27..376 158 26.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:57:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18608-PA 481 GI18608-PA 317..481 315..456 162 32.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:57:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21763-PA 453 GM21763-PA 1..453 1..456 1940 91.4 Plus
Dsec\GM25117-PA 2737 GM25117-PA 987..1102 203..313 200 43.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:57:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11254-PA 415 GD11254-PA 1..408 1..422 1669 87.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:57:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17873-PA 364 GK17873-PA 248..364 337..456 169 38.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:57:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11652-PA 446 GE11652-PA 1..446 1..456 1598 80.5 Plus
Dyak\GE20804-PA 2782 GE20804-PA 998..1137 167..313 209 39.5 Plus
Dyak\GE20804-PA 2782 GE20804-PA 1164..1294 195..316 206 41.2 Plus
Dyak\GE20804-PA 2782 GE20804-PA 1195..1321 186..308 180 43 Plus