GH14656.complete Sequence
794 bp (794 high quality bases) assembled on 2001-11-29
GenBank Submission: AY089506.1
> GH14656.complete
CAACCGTTAACAACTATTACTATAAGATAAATTCATTTCGACCTAGCCGT
TTTTTCACCTCCAACAGTCCAAAATGTCAGAAGAAGAAGCCCCAGGATCT
CCGGGTGAGGCTGTTGAAGAAGAAGATACCACTACATCCGATGCTGATAC
AACCACAGCTGGTGCCCGCATGATGATGATCCACCCATGGCTGACGGCCG
CCGCAGTGGCCATGTATGCCACCAAGGTCATGTGGGTCAAGTTCCGTGAG
ATCGGCCTGGCTAAACAGGAAAAACGGCTCAAAAATCAACTGGCGAAGCA
GTCTAAGCCCTTGCAGACTATTGATGAAGATGTTTCCGAATCTGATGCAG
AATATGATGCAGAATCTGATGCAGAATCTGATGCAGAATCAGATGCAGAG
GACGAAGACGTCGTCGGGCCCCAAGTCGAAGATGCAGCAGAGGGACCGGG
ATTCGAGCCAAACCGTGTGGATATATGCCATCGCCCGATCGAAGTCTCTA
CTGACTGCTGATGTTCGAATCGGGGATGAAGGACCGCGGAAGGATGAACA
TGCACACACACACTGGACAACTACACTAATTGTTGTAATGCTTGCGTTTT
CCGTAGGGGAGGATCCACGGACAATGTTTGACATGTACCACCACATTGGG
GGACACAAATTGTTAGTTTTAAAACATTAACCAAATTTCTTGTACCACAT
TGCGATATTTGAATTAGTTTTTATGAGTTTATATTAAATGCTGCGATGAA
AGTATGGTACCCTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
GH14656.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:02:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12699-RB | 976 | CG12699-RB | 68..839 | 1..772 | 3845 | 99.8 | Plus |
CG18469-RA | 509 | CG18469-RA | 108..212 | 164..268 | 225 | 80.9 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:10:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 13133588..13134277 | 766..65 | 3295 | 98.3 | Minus |
chr2R | 21145070 | chr2R | 13134363..13134429 | 67..1 | 335 | 100 | Minus |
chr2R | 21145070 | chr2R | 13133121..13133225 | 268..164 | 225 | 81 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:52:32 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:10:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17246524..17247231 | 772..65 | 3525 | 99.9 | Minus |
2R | 25286936 | 2R | 17247317..17247383 | 67..1 | 335 | 100 | Minus |
2R | 25286936 | 2R | 17246066..17246170 | 268..164 | 225 | 81 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:33:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 17247723..17248430 | 772..65 | 3525 | 99.8 | Minus |
2R | 25260384 | 2R | 17248516..17248582 | 67..1 | 335 | 100 | Minus |
2R | 25260384 | 2R | 17247265..17247369 | 268..164 | 225 | 80.9 | Minus |
Blast to na_te.dros performed on 2019-03-16 04:10:56 has no hits.
GH14656.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:12:04 Download gff for
GH14656.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 13133588..13134274 | 68..766 | 91 | <- | Minus |
chr2R | 13134363..13134429 | 1..67 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:43:10 Download gff for
GH14656.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12699-RA | 1..438 | 74..511 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:43:14 Download gff for
GH14656.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12699-RB | 1..438 | 74..511 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:19:49 Download gff for
GH14656.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12699-RB | 1..438 | 74..511 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:35:22 Download gff for
GH14656.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12699-RA | 1..438 | 74..511 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:30:02 Download gff for
GH14656.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12699-RB | 1..438 | 74..511 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:17:41 Download gff for
GH14656.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12699-RA | 1..770 | 1..766 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:43:14 Download gff for
GH14656.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12699-RB | 1..766 | 1..766 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:19:49 Download gff for
GH14656.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12699-RB | 1..766 | 1..766 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:35:22 Download gff for
GH14656.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12699-RA | 1..770 | 1..766 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:30:02 Download gff for
GH14656.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12699-RB | 1..766 | 1..766 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:12:04 Download gff for
GH14656.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17246530..17247228 | 68..766 | 100 | <- | Minus |
2R | 17247317..17247383 | 1..67 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:12:04 Download gff for
GH14656.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17246530..17247228 | 68..766 | 100 | <- | Minus |
2R | 17247317..17247383 | 1..67 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:12:04 Download gff for
GH14656.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17246530..17247228 | 68..766 | 100 | <- | Minus |
2R | 17247317..17247383 | 1..67 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:19:49 Download gff for
GH14656.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13134822..13134888 | 1..67 | 100 | | Minus |
arm_2R | 13134035..13134733 | 68..766 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:07:44 Download gff for
GH14656.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17248516..17248582 | 1..67 | 100 | | Minus |
2R | 17247729..17248427 | 68..766 | 100 | <- | Minus |
GH14656.pep Sequence
Translation from 73 to 510
> GH14656.pep
MSEEEAPGSPGEAVEEEDTTTSDADTTTAGARMMMIHPWLTAAAVAMYAT
KVMWVKFREIGLAKQEKRLKNQLAKQSKPLQTIDEDVSESDAEYDAESDA
ESDAESDAEDEDVVGPQVEDAAEGPGFEPNRVDICHRPIEVSTDC*
GH14656.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:07:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF13413-PA | 198 | GF13413-PA | 32..68 | 32..68 | 168 | 81.1 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:07:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG22205-PA | 132 | GG22205-PA | 10..132 | 8..145 | 239 | 52.5 | Plus |
Dere\GG22206-PA | 146 | GG22206-PA | 1..119 | 1..119 | 220 | 48 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12699-PB | 145 | CG12699-PB | 1..145 | 1..145 | 748 | 100 | Plus |
CG18469-PA | 128 | CG18469-PA | 1..116 | 1..119 | 229 | 45.9 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:07:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM19992-PA | 143 | GM19992-PA | 1..143 | 1..145 | 395 | 71.8 | Plus |
Dsec\GM19993-PA | 124 | GM19993-PA | 19..101 | 13..97 | 161 | 54.1 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:07:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD25485-PA | 131 | GD25485-PA | 19..113 | 13..113 | 169 | 49.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:07:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE14203-PA | 125 | GE14203-PA | 3..87 | 4..83 | 192 | 71.8 | Plus |
Dyak\GE14204-PA | 133 | GE14204-PA | 14..95 | 11..101 | 185 | 54.9 | Plus |
GH14656.hyp Sequence
Translation from 215 to 679
> GH14656.hyp
MPPRSCGSSSVRSAWLNRKNGSKINWRSSLSPCRLLMKMFPNLMQNMMQN
LMQNLMQNQMQRTKTSSGPKSKMQQRDRDSSQTVWIYAIARSKSLLTADV
RIGDEGPRKDEHAHTHWTTTLIVVMLAFSVGEDPRTMFDMYHHIGGHKLL
VLKH*
Sequence GH14656.hyp has no blast hits.