Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
GH14674.complete Sequence
1558 bp (1558 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051491.1
> GH14674.complete
CTGGTGAGAATGTTGCGTCTGTTCAGCAGCCGTTTTTACTGCAAAATTGC
AACAAAATCGAATGAAAAGGCCACTAAATTGGACTTCAAGCAGCTAACGC
ATCCCACCAAGGTGCCACAGACACCAGTGGACTCGAAGTTTCCCGACACC
AGCGCCTCCGAAATCCAGATCGACACGAAAACCATCCAGTTGCTGGAGCG
GCTGTCGCTGGTGGATCTGGATAGCGAACGAGCGCTGGCCACGCTAAAGA
GCAGCATACAGTTCGCGGACAAGATTGCCCATATCAACACGGAGCACGTG
CGTCCACTGTACACGGTCCTGGAGCATCAGCAGCTCCAGTTACGCAACGA
CCAGGTGACCGAAGGCGATTGCCGGGCGGAGGTGCTCCGGAACGCCAAGG
TGACGGACGAGGACTACTTCGTTTCGCCGCCGGGCAACATTCCGCTGGAG
CAATGAGTCGCATACAACGATGCTTTAAGTCCCTGGCTTCCGCTGGCTTC
TTTCGCACCGTGGAAGACAATAAACTGGAGCTACTGAGTCATGGAAGGGA
ATACGCCAAACTGTTGCAACAGCATTGGACACGACTACGTCCCTTGGCTG
CGCACCTGGGCGCCACGAAAGAACCCATAAATCCAGTCAACATCCAGCGT
TTTTCCTTTCCACAAAGCCAGCAATTCCGTAACAATTTCCAAAAACTCGT
CAAAGATCATCCTCGAAAGGCCAAATGTCCCACTCTTCTGAAACATCAAA
GCACTTGTTCTGGTCCCACTAGCAATTCCCTATTTGGGATAAAGGGTCCT
ACGCTACATTTAACCACGGACTTCCTAGTGGAACCACATCGCGCACTGGA
GCACTTCTACAACATGCAGCGTGAGAGCAAGATCTGGTGGATGCGTCTTT
CCTCGAATCCCAGTCGCTACCGCATCGTACCTTGCGATTTGGCTGAGGAT
CTCAATCCCAACGACTATCAAGCCATCGATATCCGCACGAGCTACGGTGA
TGCAGGAGAAGTGACCGTGGAGCAACTGAGCCTGGTGAGAATAGTGGACG
ACAAAGACTTCCGGCTGCCCGATGCGCGAACGGGTGAAATTGTGCAACCG
ACTGTCATAAGGTCTGTGATAGAGCTGGAAACTACCACCTGCGCTCTGCT
TCTGGATGGCTGTGATCATGGCCGGGACTCGCAATCCCTGCTCTTACACC
GCGTTCTGGCGCCATATCAATGTGGAATTGCCTGTGTGGAAAGTGATTCC
GAGCTATCTGCTGACTTGTCTGATCTTTGTCAGCATCTGAAACATGTTCT
CAACCACGCCGGTCTTAGACTTTCTGAAGGGGATGGAATTCGTACGACGA
AGAACGCTTCTCATTTAGCAGAGCACTTGCTGGAAACGGATATGCTCGGC
ATACCTTATACACTTGTTATAAACGAGCAAACGCTAAGAAACGGACTGAT
GCAGTTGCGCAGCCGGGACACAAGGCTGGCGGAGACCATACACATAAGCG
ATGTACCGGACTATTTATTAAATATATTTAAAAACTAAAAAAAAAAAAAA
AAAAAAAA
GH14674.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:36:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33649-RA | 1634 | CG33649-RA | 88..1631 | 1..1544 | 7720 | 100 | Plus |
DNApol-gamma35-RA | 1634 | DNApol-gamma35-RA | 88..1631 | 1..1544 | 7720 | 100 | Plus |
Orc5-RA | 1837 | Orc5-RA | 1740..1837 | 1544..1447 | 490 | 100 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:24:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 13830677..13831819 | 1143..1 | 5700 | 99.9 | Minus |
chr2L | 23010047 | chr2L | 13830230..13830623 | 1536..1143 | 1970 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:52:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:24:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13831938..13833080 | 1143..1 | 5715 | 100 | Minus |
2L | 23513712 | 2L | 13831483..13831884 | 1544..1143 | 2010 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:57:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13831938..13833080 | 1143..1 | 5715 | 100 | Minus |
2L | 23513712 | 2L | 13831483..13831884 | 1544..1143 | 2010 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 16:24:18 has no hits.
GH14674.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:25:14 Download gff for
GH14674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 13830256..13830622 | 1144..1510 | 100 | <- | Minus |
chr2L | 13830677..13831819 | 1..1143 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:43:15 Download gff for
GH14674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DNApol-gamma35-RA | 1..1084 | 453..1536 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:26:35 Download gff for
GH14674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DNApol-gamma35-RA | 1..1084 | 453..1536 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:09:22 Download gff for
GH14674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DNApol-gamma35-RA | 1..1086 | 453..1538 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:59:44 Download gff for
GH14674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DNApol-gamma35-RA | 1..1084 | 453..1536 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:26:33 Download gff for
GH14674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DNApol-gamma35-RA | 1..1086 | 453..1538 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:25:36 Download gff for
GH14674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33649-RA | 88..1623 | 1..1536 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:26:35 Download gff for
GH14674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33649-RA | 88..1623 | 1..1536 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:09:22 Download gff for
GH14674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DNApol-gamma35-RA | 26..1561 | 1..1536 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:59:44 Download gff for
GH14674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33649-RA | 88..1623 | 1..1536 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:26:33 Download gff for
GH14674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DNApol-gamma35-RA | 26..1561 | 1..1536 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:25:14 Download gff for
GH14674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13831491..13831883 | 1144..1536 | 100 | <- | Minus |
2L | 13831938..13833080 | 1..1143 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:25:14 Download gff for
GH14674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13831491..13831883 | 1144..1536 | 100 | <- | Minus |
2L | 13831938..13833080 | 1..1143 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:25:14 Download gff for
GH14674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13831491..13831883 | 1144..1536 | 100 | <- | Minus |
2L | 13831938..13833080 | 1..1143 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:09:22 Download gff for
GH14674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13831491..13831883 | 1144..1536 | 100 | <- | Minus |
arm_2L | 13831938..13833080 | 1..1143 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:37:34 Download gff for
GH14674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13831491..13831883 | 1144..1536 | 100 | <- | Minus |
2L | 13831938..13833080 | 1..1143 | 100 | | Minus |
GH14674.pep2 Sequence
Translation from 9 to 455
> GH14674.pep2
MLRLFSSRFYCKIATKSNEKATKLDFKQLTHPTKVPQTPVDSKFPDTSAS
EIQIDTKTIQLLERLSLVDLDSERALATLKSSIQFADKIAHINTEHVRPL
YTVLEHQQLQLRNDQVTEGDCRAEVLRNAKVTDEDYFVSPPGNIPLEQ*
GH14674.pep2 Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:17:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF19721-PA | 148 | GF19721-PA | 1..148 | 1..148 | 624 | 79.1 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:17:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH10615-PA | 158 | GH10615-PA | 1..155 | 1..148 | 569 | 74.4 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:00:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GatC-PA | 148 | CG33649-PA | 1..148 | 1..148 | 752 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:17:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI17406-PA | 125 | GI17406-PA | 6..125 | 29..148 | 504 | 80 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:17:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL21081-PA | 173 | GL21081-PA | 39..173 | 9..148 | 561 | 76.4 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:17:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA29066-PA | 148 | GA29066-PA | 1..148 | 1..148 | 634 | 79.1 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:17:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM15071-PA | 148 | GM15071-PA | 1..148 | 1..148 | 739 | 94.6 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:17:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD22036-PA | 148 | GD22036-PA | 1..148 | 1..148 | 753 | 95.9 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:17:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ18086-PA | 157 | GJ18086-PA | 1..157 | 1..148 | 574 | 73.4 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:17:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK15009-PA | 153 | GK15009-PA | 1..150 | 1..148 | 523 | 71.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:17:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE11394-PA | 148 | GE11394-PA | 1..148 | 1..148 | 738 | 93.9 | Plus |
GH14674.hyp Sequence
Translation from 452 to 1535
> GH14674.hyp
MSRIQRCFKSLASAGFFRTVEDNKLELLSHGREYAKLLQQHWTRLRPLAA
HLGATKEPINPVNIQRFSFPQSQQFRNNFQKLVKDHPRKAKCPTLLKHQS
TCSGPTSNSLFGIKGPTLHLTTDFLVEPHRALEHFYNMQRESKIWWMRLS
SNPSRYRIVPCDLAEDLNPNDYQAIDIRTSYGDAGEVTVEQLSLVRIVDD
KDFRLPDARTGEIVQPTVIRSVIELETTTCALLLDGCDHGRDSQSLLLHR
VLAPYQCGIACVESDSELSADLSDLCQHLKHVLNHAGLRLSEGDGIRTTK
NASHLAEHLLETDMLGIPYTLVINEQTLRNGLMQLRSRDTRLAETIHISD
VPDYLLNIFKN
GH14674.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:51:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DNApol-gamma35-PA | 361 | CG33650-PA | 1..361 | 1..361 | 1893 | 100 | Plus |
GH14674.pep Sequence
Translation from 452 to 1537
> GH14674.pep
MSRIQRCFKSLASAGFFRTVEDNKLELLSHGREYAKLLQQHWTRLRPLAA
HLGATKEPINPVNIQRFSFPQSQQFRNNFQKLVKDHPRKAKCPTLLKHQS
TCSGPTSNSLFGIKGPTLHLTTDFLVEPHRALEHFYNMQRESKIWWMRLS
SNPSRYRIVPCDLAEDLNPNDYQAIDIRTSYGDAGEVTVEQLSLVRIVDD
KDFRLPDARTGEIVQPTVIRSVIELETTTCALLLDGCDHGRDSQSLLLHR
VLAPYQCGIACVESDSELSADLSDLCQHLKHVLNHAGLRLSEGDGIRTTK
NASHLAEHLLETDMLGIPYTLVINEQTLRNGLMQLRSRDTRLAETIHISD
VPDYLLNIFKN*
GH14674.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:55:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF19722-PA | 226 | GF19722-PA | 1..225 | 138..361 | 805 | 67.1 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:55:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG10179-PA | 361 | GG10179-PA | 1..361 | 1..361 | 1715 | 88.1 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:55:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH10616-PA | 376 | GH10616-PA | 3..375 | 2..361 | 1000 | 55.1 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:37:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DNApol-gamma35-PA | 361 | CG33650-PA | 1..361 | 1..361 | 1893 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:55:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI17407-PA | 365 | GI17407-PA | 3..364 | 2..361 | 1042 | 57.9 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:55:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL21082-PA | 223 | GL21082-PA | 1..223 | 138..361 | 814 | 70.1 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:55:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA17267-PA | 223 | GA17267-PA | 1..223 | 138..361 | 807 | 69.6 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:55:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM15082-PA | 224 | GM15082-PA | 1..224 | 138..361 | 1131 | 95.1 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:55:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD22037-PA | 313 | GD22037-PA | 24..313 | 72..361 | 1467 | 94.5 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:55:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ18087-PA | 365 | GJ18087-PA | 3..364 | 2..361 | 978 | 56.8 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:55:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK15010-PA | 333 | GK15010-PA | 1..333 | 25..361 | 995 | 57.3 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:55:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE11405-PA | 224 | GE11405-PA | 1..224 | 138..361 | 1078 | 90.2 | Plus |